BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0021.p         (583 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sll1673_3 [T] COG2199 FOG Syn Synechocystis                           175   2e-43
RSp0400_2 [T] COG2199 FOG Rso Ralstonia solanacearum                  165   3e-40
mll9509 [T] COG3706 Response regulator containing a CheY-like re...   164   4e-40
RSp0398_2 [T] COG2199 FOG Rso Ralstonia solanacearum                  159   2e-38
slr0829_3 [T] COG2199 FOG Syn Synechocystis                           158   3e-38

>sll1673_3 [T] COG2199 FOG Syn Synechocystis
          Length = 176

 Score =  175 bits (444), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 87/175 (49%), Positives = 119/175 (68%), Gaps = 1/175 (0%)

Query: 401 LELANRKLEALSATDGLTGVANRRRFDEVLDSELRRSVRSGHALALLMLDVDYFKKYNDR 460
           L+ AN++L+ L+  DGLT +ANRRRFDE L  E +R  R    L+L+++D+DYFK YND 
Sbjct: 1   LQAANQQLQLLANIDGLTHIANRRRFDEYLAQEWQRHCREQKPLSLILVDIDYFKAYNDL 60

Query: 461 YGHVAGDECLRIVARVLQKSSRRATDLVARYGGEEFCVIIAESDTAHALQQAEHICQAIF 520
           YGH  GD+CL+ VA  L   ++R TDLVARYGGEEF +++  ++   AL  AE++ QAI 
Sbjct: 61  YGHQKGDDCLQKVANTLVDIAKRITDLVARYGGEEFVIVLPNTNRQDALAMAENMLQAIA 120

Query: 521 ELKLPHADSPFG-YITASIGVASLQPDEHTSAEQLLRVADQALYHAKYQGRNRVV 574
            L +PH  S    Y+T SIGV+S+ P    + E+++  ADQALY AK QGRNR +
Sbjct: 121 ALAIPHEGSSVSKYVTISIGVSSIIPMPEDTIERIISEADQALYSAKSQGRNRAI 175


>RSp0400_2 [T] COG2199 FOG Rso Ralstonia solanacearum
          Length = 206

 Score =  165 bits (417), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 82/172 (47%), Positives = 109/172 (63%), Gaps = 1/172 (0%)

Query: 404 ANRKLEALSATDGLTGVANRRRFDEVLDSELRRSVRSGHALALLMLDVDYFKKYNDRYGH 463
           A R+   L+ TD LTG+ NRR  D  LD E +R++R    +++LM+DVD FK YND YGH
Sbjct: 10  AGRRHAELAITDALTGLPNRRALDAFLDKEWKRALRERWPVSVLMIDVDAFKPYNDHYGH 69

Query: 464 VAGDECLRIVARVLQKSSRRATDLVARYGGEEFCVIIAESDTAHALQQAEHICQAIFELK 523
           + GD  L+ VAR +Q  + R+ DL ARYGGEEFC+++  +D   A+  AEHI QA+  L 
Sbjct: 70  LGGDTALKAVARCIQAHASRSGDLAARYGGEEFCIVLPHTDLEGAIAVAEHIRQAVLALH 129

Query: 524 LPHADSPFGYITASIGVASLQPD-EHTSAEQLLRVADQALYHAKYQGRNRVV 574
           +PHA  P G ++ SIG A+  P      AE L + AD  LY AK QGRNR +
Sbjct: 130 IPHAQGPAGILSVSIGAATDTPALSGDRAETLTQAADTQLYRAKTQGRNRTM 181


>mll9509 [T] COG3706 Response regulator containing a CheY-like receiver
           domain and a GGDEF domain Mlo Mesorhizobium loti
          Length = 354

 Score =  164 bits (416), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 93/230 (40%), Positives = 137/230 (59%), Gaps = 8/230 (3%)

Query: 347 GAMKEAGSGDTTVRVEQAGGDEIAILSRKFNEMAGKLQQNKEELEDQVARRT-RELELAN 405
           G    AG+ D  V++     D I +++R        L   + +   +  R + R+L  AN
Sbjct: 127 GVAFAAGANDYLVKLP----DRIELIARIRYHTRAYLDHVQRDAAYRALRESQRQLISAN 182

Query: 406 RKLEALSATDGLTGVANRRRFDEVLDSELRRSVRSGHALALLMLDVDYFKKYNDRYGHVA 465
            +LE L+  DGLTG+ NRR FDE L +E +R+ R+   L+LLM+D D FK+YND YGH+A
Sbjct: 183 LELERLTRIDGLTGLGNRRYFDEYLAAEWKRAFRAQSPLSLLMIDADNFKRYNDTYGHMA 242

Query: 466 GDECLRIVARVLQKSSRRATDLVARYGGEEFCVIIAESDTAHALQQAEHICQAIFELKLP 525
           GDE L+ +ARV+   S R+TDL ARYGGEEF +++ ++    +   AE + Q + EL +P
Sbjct: 243 GDEVLKQIARVIHSGSGRSTDLAARYGGEEFVIVLVDTLLEESSAIAEQLVQGVRELNIP 302

Query: 526 HADSPFGYITASIGVASLQPDEHTSAEQLLRVADQALYHAKYQGRNRVVL 575
           H       +T S+GVA+  P+E+ +    +  AD AL+ AK +GRNRV L
Sbjct: 303 HGPD---RVTISVGVATTVPNENETPNDFVNAADLALFRAKSEGRNRVAL 349


>RSp0398_2 [T] COG2199 FOG Rso Ralstonia solanacearum
          Length = 177

 Score =  159 bits (401), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/171 (50%), Positives = 106/171 (61%), Gaps = 2/171 (1%)

Query: 406 RKLEALSATDGLTGVANRRRFDEVLDSELRRSVRSGHALALLMLDVDYFKKYNDRYGHVA 465
           R+   L+ATD LTG+ANRR  DE LD+E RR+ R    L++LM+DVD+FK YND YGH  
Sbjct: 6   RRHAELAATDALTGLANRRALDERLDAEWRRAARERQPLSVLMIDVDHFKAYNDHYGHPD 65

Query: 466 GDECLRIVARVLQKSSRRATDLVARYGGEEFCVIIAESDTAHALQQAEHICQAIFELKLP 525
           GD  L+ VAR +Q + RR  DL ARYGGEEFCV++  SD   A   AE I +AI  L +P
Sbjct: 66  GDAALQAVARCIQANLRRPGDLAARYGGEEFCVVLPGSDLDSANVVAETIRRAILVLNIP 125

Query: 526 HADSPFGYITASIGVASLQPDE--HTSAEQLLRVADQALYHAKYQGRNRVV 574
           HA S    +T SIG AS  P       A  L + AD  LY AK  GRNR +
Sbjct: 126 HARSASTALTVSIGAASGTPASSGEPRAATLTKAADAQLYRAKTSGRNRTM 176


>slr0829_3 [T] COG2199 FOG Syn Synechocystis
          Length = 188

 Score =  158 bits (400), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 83/179 (46%), Positives = 115/179 (64%), Gaps = 1/179 (0%)

Query: 401 LELANRKLEALSATDGLTGVANRRRFDEVLDSELRRSVRSGHALALLMLDVDYFKKYNDR 460
           LE  N+KL  L   DGLT +ANRR F+  +  E RR  R+   ++L+M D+D FK YNDR
Sbjct: 1   LERFNKKLSQLIDIDGLTKIANRRCFNVRIKQEWRRLSRAQVPISLIMFDIDCFKNYNDR 60

Query: 461 YGHVAGDECLRIVARVLQKSSRRATDLVARYGGEEFCVIIAESDTAHALQQAEHICQAIF 520
           YGH  GD CL  VA+  +K++ R  DLVAR+GGEEF V++ E+DT  A+  AE I QAI 
Sbjct: 61  YGHPEGDLCLIRVAQAARKAASRPADLVARFGGEEFAVLLPETDTKGAIMVAEKIIQAIS 120

Query: 521 ELKLPHADSPF-GYITASIGVASLQPDEHTSAEQLLRVADQALYHAKYQGRNRVVLGSD 578
           +L + H  SP  G IT S+G+ +  P +   +  L++ AD ALY AK +GRN+ V+ ++
Sbjct: 121 QLAIAHEASPISGQITISLGIGTQFPSKELISRTLIKQADMALYEAKRRGRNQYVVWTE 179