BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0009.p (226 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2030 [O] COG0830 Urease accessory protein UreF Rso Ralstonia ... 154 2e-37 alr0734 [O] COG0830 Urease accessory protein UreF Nos Nostoc sp.... 127 2e-29 PA4892 [O] COG0830 Urease accessory protein UreF Pae Pseudomonas... 122 5e-28 ZureF.2 [O] COG0830 Urease accessory protein UreF EcZ Escherichi... 119 5e-27 ZureF [O] COG0830 Urease accessory protein UreF EcZ Escherichia ... 119 5e-27 >RSc2030 [O] COG0830 Urease accessory protein UreF Rso Ralstonia solanacearum Length = 229 Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 99/227 (43%), Positives = 132/227 (58%), Gaps = 4/227 (1%) Query: 3 AAALLHLLQLSSPSLPIGAYSYSQGLEAAIECGRVGSEATARAWIGHALHEVVARFEAPI 62 AA L LL L+SP+LP+GA+SYSQGLEAA+E V EA+A WI L V+A EAP+ Sbjct: 4 AAQLTALLHLASPALPVGAFSYSQGLEAAVEARHVHDEASAARWIAEGL-AVLAACEAPL 62 Query: 63 FARLVAAFEARDAEKVTLWTERFIAARDTSEFRAETIQMGYSLGKLATDLKLGDEALLAI 122 + A ++A + V F+A R+T E R ET QMG+SL +L + G A+ Sbjct: 63 WLLQYADWQAGRLDAVAERDGWFLATRETRELRLETAQMGWSLARLIAQMGWGAPAMRDA 122 Query: 123 LQAQPELPLPTSLAFATVSLQVPREAAVLGMLFAWAENQVLACVKTVPLGQVAGQRILLS 182 L A+ + PT+ A A V+L + + FAW ENQV A VK +PLGQ AGQRIL Sbjct: 123 LAARAAITFPTAFAAAAVALGIEARDGLTAYSFAWVENQVAAAVKAIPLGQAAGQRILFG 182 Query: 183 LQPELEK---AAATALTLEDDELCNWAPGLSLLSMQHEVQYSRIYRS 226 L + + AA EL ++PGL +LS +HE QYSR++RS Sbjct: 183 LHAAVGQAAEDAARRAACHPPELSTFSPGLGVLSARHETQYSRLFRS 229 >alr0734 [O] COG0830 Urease accessory protein UreF Nos Nostoc sp. PCC 7120 Length = 206 Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 89/221 (40%), Positives = 122/221 (55%), Gaps = 28/221 (12%) Query: 19 IGAYSYSQGLEAAIECGRVGSEATARAWIGHALHEVVARFEAPIFARLVAAFEARDAEKV 78 +GAYSYS+GLE +E G + S++T + W+ L R EA + R A D E + Sbjct: 1 MGAYSYSEGLETLVENGTITSQSTLQQWLEAELSYGAIRLEAAVMVRAYQAATMDDMETL 60 Query: 79 TLWTERFIAARDTSEFRAETIQMGYSLGKLATDLKLGDEALLAILQAQPEL--------- 129 W AAR+T E R + QMG SL +L LG + QPE+ Sbjct: 61 CYWNLWLSAARETQELRNSSWQMGRSLMQL-----LG--------KIQPEILPLANAVGN 107 Query: 130 PLPTSLAF--ATVSLQVPREAAVLGMLFAWAENQVLACVKTVPLGQVAGQRILLSLQPEL 187 P ++AF A+ Q+ +AA+L L +WA N + A VK +PLGQ AGQ +LL LQP + Sbjct: 108 PCNYAIAFGIASAHWQINIQAALLAYLHSWATNLITAGVKLIPLGQTAGQELLLQLQPLI 167 Query: 188 EKAAATALTLEDDEL--CNWAPGLSLLSMQHEVQYSRIYRS 226 A ++L+DDEL C+W GLSL SMQHE QY+R++RS Sbjct: 168 SHATVEIMSLKDDELSCCSW--GLSLASMQHETQYTRLFRS 206 >PA4892 [O] COG0830 Urease accessory protein UreF Pae Pseudomonas aeruginosa Length = 223 Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 92/217 (42%), Positives = 125/217 (57%), Gaps = 1/217 (0%) Query: 10 LQLSSPSLPIGAYSYSQGLEAAIECGRVGSEATARAWIGHALHEVVARFEAPIFARLVAA 69 L+L+S LPIG YSYSQGLEAA++ G V +AR W+ L +ARFEAP+ A L+ A Sbjct: 8 LRLASSQLPIGGYSYSQGLEAALDNGWVRDAESARTWLVDQLQLNLARFEAPLLAGLLRA 67 Query: 70 FEARDAEKVTLWTERFIAARDTSEFRAETIQMGYSLGKLATDLKLGDEALLAILQAQPEL 129 D +ER A+R+T E E+ QMG+SL +L L D A L Q Sbjct: 68 ALIGDWAACDAASERHRASRETRELAQESRQMGFSLHQLLEALPELDAPGRAWLARQDPP 127 Query: 130 PLPTSLAFATVSLQVPREAAVLGMLFAWAENQVLACVKTVPLGQVAGQRILLSLQPELEK 189 L + A A + ++ E A+ ++W ENQ+ +KT+PLGQ+A Q++ SL PEL++ Sbjct: 128 NLAAAWAMAARAWRLDAEEALSAWFWSWLENQLAVLMKTLPLGQLAAQKLASSLLPELDR 187 Query: 190 AAATALTLEDDELCNWAPGLSLLSMQHEVQYSRIYRS 226 A A AL E A GL+L SM HE QYSR++RS Sbjct: 188 ACAEALRRPAVEGSA-AFGLALASMTHETQYSRLFRS 223 >ZureF.2 [O] COG0830 Urease accessory protein UreF EcZ Escherichia coli O157:H7 EDL933 Length = 224 Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 113/220 (51%), Gaps = 3/220 (1%) Query: 7 LHLLQLSSPSLPIGAYSYSQGLEAAIECGRVGSEATARAWIGHALHEVVARFEAPIFARL 66 L L+QL+S SLP+G YS+SQGLE A+E G V A W + + + P+ ARL Sbjct: 8 LRLMQLASNSLPVGGYSWSQGLEWAVEAGWVEDSAAFEHWQQLQMEQSFFAVDLPLLARL 67 Query: 67 VAAFEARDAEKVTLWTERFIAARDTSEFRAETIQMGYSLGKLATDLKLGDEALLAILQAQ 126 A EA D + WT +A R+T E R E G + +L D + A L Q Sbjct: 68 YRACEAGDPDSAGRWTAYLLACRETRELRDEERNRGAAFTRLLVDWQPDCPAEWRKLCQQ 127 Query: 127 PELPLPTSLAFATVSLQVPREAAVLGMLFAWAENQVLACVKTVPLGQVAGQRILLSLQPE 186 +L T +A+ V Q+ L + ++W E+ V+A V+ VP GQ+A Q++++ L Sbjct: 128 SQL---TGMAWLGVRWQISVSDLALSLGYSWIESAVMAGVRLVPYGQLAAQQLIMRLCAR 184 Query: 187 LEKAAATALTLEDDELCNWAPGLSLLSMQHEVQYSRIYRS 226 +AL D + + P S+ S +HE QYSR++RS Sbjct: 185 YAANMDSALATPDHAIGSATPLASIASARHETQYSRLFRS 224 >ZureF [O] COG0830 Urease accessory protein UreF EcZ Escherichia coli O157:H7 EDL933 Length = 224 Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 113/220 (51%), Gaps = 3/220 (1%) Query: 7 LHLLQLSSPSLPIGAYSYSQGLEAAIECGRVGSEATARAWIGHALHEVVARFEAPIFARL 66 L L+QL+S SLP+G YS+SQGLE A+E G V A W + + + P+ ARL Sbjct: 8 LRLMQLASNSLPVGGYSWSQGLEWAVEAGWVEDSAAFEHWQQLQMEQSFFAVDLPLLARL 67 Query: 67 VAAFEARDAEKVTLWTERFIAARDTSEFRAETIQMGYSLGKLATDLKLGDEALLAILQAQ 126 A EA D + WT +A R+T E R E G + +L D + A L Q Sbjct: 68 YRACEAGDPDSAGRWTAYLLACRETRELRDEERNRGAAFTRLLVDWQPDCPAEWRKLCQQ 127 Query: 127 PELPLPTSLAFATVSLQVPREAAVLGMLFAWAENQVLACVKTVPLGQVAGQRILLSLQPE 186 +L T +A+ V Q+ L + ++W E+ V+A V+ VP GQ+A Q++++ L Sbjct: 128 SQL---TGMAWLGVRWQISVSDLALSLGYSWIESAVMAGVRLVPYGQLAAQQLIMRLCAR 184 Query: 187 LEKAAATALTLEDDELCNWAPGLSLLSMQHEVQYSRIYRS 226 +AL D + + P S+ S +HE QYSR++RS Sbjct: 185 YAANMDSALATPDHAIGSATPLASIASARHETQYSRLFRS 224