BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0170.p         (92 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll7032 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel tran...   104   4e-23
AGl2822 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel tran...   103   1e-22
SMa1863 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel tran...   101   5e-22
mll5124 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel tran...    95   4e-20
SMc01644 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel tra...    92   2e-19

>mll7032 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components Mlo Mesorhizobium loti
          Length = 283

 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/84 (78%), Positives = 74/84 (88%)

Query: 4   EMLPNMIRPVLADFGLRFVYVVLLLSGLSFLSLGVQPPDADWGSLVRENISGLGEGALAV 63
           E+LPN+IRPVLADFGLRFV++VLLLSGLSFL LG+QPP ADWG+LVRENI GL   A AV
Sbjct: 194 EILPNIIRPVLADFGLRFVFIVLLLSGLSFLGLGLQPPLADWGALVRENIGGLPFAAPAV 253

Query: 64  IMPALAIASLTIGVNLLIDNLRSK 87
           I+P+LAIASLTI VNLLIDNL  K
Sbjct: 254 IIPSLAIASLTISVNLLIDNLPQK 277


>AGl2822 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 283

 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/87 (73%), Positives = 75/87 (86%)

Query: 1   MTVEMLPNMIRPVLADFGLRFVYVVLLLSGLSFLSLGVQPPDADWGSLVRENISGLGEGA 60
           ++ E+LPN+IRPVLAD G+RFV++VLLLSGLSFL LG+QPP+ADWG+LVRENI GL   A
Sbjct: 191 ISSEILPNIIRPVLADLGVRFVFIVLLLSGLSFLGLGLQPPNADWGALVRENIGGLPFAA 250

Query: 61  LAVIMPALAIASLTIGVNLLIDNLRSK 87
            AVI P+LAIASLTI VNLLIDNL  K
Sbjct: 251 PAVIFPSLAIASLTISVNLLIDNLPQK 277


>SMa1863 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components Sme Sinorhizobium meliloti
          Length = 287

 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/84 (76%), Positives = 71/84 (84%)

Query: 4   EMLPNMIRPVLADFGLRFVYVVLLLSGLSFLSLGVQPPDADWGSLVRENISGLGEGALAV 63
           E+LPN+I PVLAD G+RFV++VLLLSGLSFL LGVQPP ADWG+LVRENI GL  GA AV
Sbjct: 198 EILPNIIGPVLADLGIRFVFIVLLLSGLSFLGLGVQPPYADWGALVRENIGGLPFGAPAV 257

Query: 64  IMPALAIASLTIGVNLLIDNLRSK 87
           I P+ AIASLTI VNLLIDNL  K
Sbjct: 258 IFPSFAIASLTISVNLLIDNLPQK 281


>mll5124 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components Mlo Mesorhizobium loti
          Length = 274

 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/87 (52%), Positives = 64/87 (73%)

Query: 4   EMLPNMIRPVLADFGLRFVYVVLLLSGLSFLSLGVQPPDADWGSLVRENISGLGEGALAV 63
           E+LPN + P++++ GLRF+Y VL LS LSFL LGVQPPDADWG +V+EN  G+  G  A 
Sbjct: 182 EILPNALSPLVSELGLRFIYAVLFLSTLSFLGLGVQPPDADWGGMVKENKDGIVFGIAAA 241

Query: 64  IMPALAIASLTIGVNLLIDNLRSKRAA 90
           ++PA AIA+L I VNL+ D + ++  +
Sbjct: 242 LIPAGAIAALAISVNLVADWILNRTTS 268


>SMc01644 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components Sme Sinorhizobium meliloti
          Length = 275

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/87 (50%), Positives = 63/87 (72%)

Query: 4   EMLPNMIRPVLADFGLRFVYVVLLLSGLSFLSLGVQPPDADWGSLVRENISGLGEGALAV 63
           E+LPN + P+LA+FGLRF + +L LS LSFL LG+QPP ADWG +V++N  G+  G  A 
Sbjct: 181 EILPNTLSPLLAEFGLRFAFSILFLSTLSFLGLGIQPPAADWGGMVKDNKDGIIFGISAA 240

Query: 64  IMPALAIASLTIGVNLLIDNLRSKRAA 90
           ++P  AIA+L I VNL++D L  + ++
Sbjct: 241 LIPGAAIAALAICVNLVVDWLMKRTSS 267