BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0169.p         (207 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMa1863 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel tran...   173   2e-43
mll7032 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel tran...   157   1e-38
AGl2822 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel tran...   155   5e-38
mll5124 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel tran...   119   3e-27
TM1153 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel trans...   114   1e-25

>SMa1863 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components Sme Sinorhizobium meliloti
          Length = 287

 Score =  173 bits (439), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 86/167 (51%), Positives = 116/167 (69%)

Query: 31  RHSTMAWIGMVIVGFWILMAILGPSISPYDATAIVDTDVFSGMSHKFLLGSDYLGRDMLS 90
           R + +  +G+ I+  W L+AI  P I PY    IVD D F  MS  F LGSDYLGRDMLS
Sbjct: 21  RFNIVGMVGLSIILCWALVAIFAPLIIPYPVGEIVDLDYFGPMSRDFWLGSDYLGRDMLS 80

Query: 91  RILFGTRATIGLALLSTVVASLSGTAIALFAAFSGGWRDAVISRALDALISIPSKMFALM 150
           RIL G R T+G++L +  +A  SG  + + AA +GGW D ++SR LDAL SIPSK+F L+
Sbjct: 81  RILMGARYTVGISLAAVTIACFSGVVLGMIAAVAGGWLDTLLSRLLDALNSIPSKLFGLV 140

Query: 151 MVATFGSSMFLLVLTAAITYMPGAYRIARSLAVNVQAMEYVQAARAR 197
           +VA  GSS+ +L+LT ++ Y+PGAYR AR+LAVN+ AM+++  AR R
Sbjct: 141 VVAAVGSSIPVLILTLSVIYIPGAYRFARALAVNINAMDFITVARIR 187


>mll7032 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components Mlo Mesorhizobium loti
          Length = 283

 Score =  157 bits (398), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 78/152 (51%), Positives = 104/152 (68%)

Query: 46  WILMAILGPSISPYDATAIVDTDVFSGMSHKFLLGSDYLGRDMLSRILFGTRATIGLALL 105
           W L+AI  P+I P+    IVD D F  M     LGSDYLGRDMLSR+L G R T+G++L 
Sbjct: 32  WTLIAIFAPTIIPHSIGDIVDDDYFGPMRQGLWLGSDYLGRDMLSRVLMGARYTVGISLA 91

Query: 106 STVVASLSGTAIALFAAFSGGWRDAVISRALDALISIPSKMFALMMVATFGSSMFLLVLT 165
           +  +A  SG  + + AA  GGW D  +SR LDA+ SIPSK+F L++VA  GSS+  L+LT
Sbjct: 92  AVAIACFSGVVLGMTAAVIGGWVDTCLSRFLDAMNSIPSKLFGLVVVAAVGSSIPALILT 151

Query: 166 AAITYMPGAYRIARSLAVNVQAMEYVQAARAR 197
            A+ Y+PGAYR AR+LAVN+ +M+++  AR R
Sbjct: 152 LAVIYIPGAYRFARALAVNINSMDFMTVARVR 183


>AGl2822 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 283

 Score =  155 bits (393), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 77/158 (48%), Positives = 108/158 (68%)

Query: 40  MVIVGFWILMAILGPSISPYDATAIVDTDVFSGMSHKFLLGSDYLGRDMLSRILFGTRAT 99
            +++  W ++AI  P + PY    IVD D F  M+    LGSDYLGRD+ SRIL G R T
Sbjct: 26  FLVIFIWAMVAIFAPYLIPYPVGDIVDLDYFGPMTSDLWLGSDYLGRDVFSRILMGARFT 85

Query: 100 IGLALLSTVVASLSGTAIALFAAFSGGWRDAVISRALDALISIPSKMFALMMVATFGSSM 159
           +G++L +  +A +SG  + + AA  GGW DA++SR LDA+ SIPSK+F L++VA  GSS+
Sbjct: 86  VGISLAAVTIACVSGVVLGMCAAVVGGWFDAMLSRFLDAVNSIPSKLFGLVVVAAVGSSI 145

Query: 160 FLLVLTAAITYMPGAYRIARSLAVNVQAMEYVQAARAR 197
            +L++T ++ Y PGAYR AR+LAVNV  M++V  AR R
Sbjct: 146 PVLIVTLSVIYTPGAYRFARALAVNVNTMDFVTVARVR 183


>mll5124 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components Mlo Mesorhizobium loti
          Length = 274

 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 108/169 (63%), Gaps = 1/169 (0%)

Query: 29  VRRHSTMAWIGMVIVGFWILMAILGPSISPYDATAIVDTDVFSGMSHKFLLGSDYLGRDM 88
           +RR    A IG+V+   ++L AI  P ISP+D   IV  DV+  MS    LG+D LGRD+
Sbjct: 4   IRRIPIPALIGLVLTALFVLAAIFAPWISPHDNAEIVG-DVWEPMSAAHWLGTDNLGRDL 62

Query: 89  LSRILFGTRATIGLALLSTVVASLSGTAIALFAAFSGGWRDAVISRALDALISIPSKMFA 148
           LSR+++G R T+ +A+L+T ++   G  +   AA  GGW D ++SR +D L+SIP+ + A
Sbjct: 63  LSRMIYGARITLFIAVLATALSFSLGAILGFSAAVFGGWFDTILSRLVDLLMSIPTLIMA 122

Query: 149 LMMVATFGSSMFLLVLTAAITYMPGAYRIARSLAVNVQAMEYVQAARAR 197
           L++++   +++  L+L   +      YR++R++AV++  M+YV+AA+ R
Sbjct: 123 LVVLSVLPTNLVTLILVMGVLDSTRVYRLSRAVAVDINVMDYVEAAKLR 171


>TM1153 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport
           systems, permease components Tma Thermotoga maritima
          Length = 301

 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 109/188 (57%), Gaps = 3/188 (1%)

Query: 11  EAGAPVAPAAAATAPVKRV--RRHSTMAWIGMVIVGFWILMAILGPSISPYDATAIVDTD 68
           EA + V  +     PV ++  RR   +A++GM+I+ F+I +AI  P ++PYD T  V   
Sbjct: 9   EARSKVVVSERIFRPVFKLFRRRTGVLAFVGMIILLFYIFLAIFAPVLAPYDPTVRVGRS 68

Query: 69  VFSGMSHKFLLGSDYLGRDMLSRILFGTRATIGLALLSTVVASLSGTAIALFAAFSGGWR 128
           +    S K L G+D LGRD+ SR+++G+R  + +A L+ V+AS  G  + L + + GG  
Sbjct: 69  L-QPPSEKHLFGTDNLGRDIFSRVIYGSRIALMVAFLAVVIASAIGIPLGLISGYVGGIF 127

Query: 129 DAVISRALDALISIPSKMFALMMVATFGSSMFLLVLTAAITYMPGAYRIARSLAVNVQAM 188
           D V++  +DA+ S P  + A+ + A  G  M  + ++ A+ Y P  +R+ R+   +V+  
Sbjct: 128 DRVLTLVMDAVYSFPGLILAIAVAAVLGPGMMNIAVSIAVVYAPTYFRVVRNQVTSVKNE 187

Query: 189 EYVQAARA 196
            YV+AARA
Sbjct: 188 LYVEAARA 195