BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0166.p (464 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMa1860 [E] COG0747 ABC-type dipeptide transport system, peripla... 466 e-131 AGl2824 [E] COG0747 ABC-type dipeptide transport system, peripla... 466 e-131 mll7034 [E] COG0747 ABC-type dipeptide transport system, peripla... 445 e-125 SMc01642 [E] COG0747 ABC-type dipeptide transport system, peripl... 252 1e-66 mlr9210 [E] COG0747 ABC-type dipeptide transport system, peripla... 247 4e-65 >SMa1860 [E] COG0747 ABC-type dipeptide transport system, periplasmic component Sme Sinorhizobium meliloti Length = 536 Score = 466 bits (1200), Expect = e-131, Method: Compositional matrix adjust. Identities = 231/433 (53%), Positives = 296/433 (68%), Gaps = 2/433 (0%) Query: 31 GFTRRDMMRTLLAGSLMTVGGTGLLTASGSVMAQTGKRGGKMRIATQTSSTADTLDPAKT 90 G TRR++++ +LAG G+ +L +G+ +A T GG +R A ++STADTLDPAK Sbjct: 23 GATRRELLQMMLAGGAALSAGSLVLGRAGNAVAATPVSGGTLRAAGWSASTADTLDPAKA 82 Query: 91 AHSTDYTRVHMFYNGLTKLDGKLAPQMVLAEEMLTTDAITWTVKLRKGVVFHDGKPFTPA 150 + STDY R FYN L LD PQM LAE + T DA TWTVKLRKGV FHDGKP Sbjct: 83 SLSTDYVRCCSFYNRLAFLDKGGTPQMELAEAIETKDAKTWTVKLRKGVTFHDGKPLAAD 142 Query: 151 DVVYSIMRHKDPATASKVKVVADQFESVKATGPNEVQIKLTSANADLPVILATAQFLIIR 210 DV++S+ RH DP+ SKV +A Q KA V+I L S NADLP IL+ F+I+ Sbjct: 143 DVIFSLKRHLDPSVGSKVAKIAAQMTGFKAVDKQTVEITLASPNADLPTILSMHHFMIVA 202 Query: 211 DGTTNFSTPNGTGAFKLKEFTPGVRTIGVRNENYWKTGLPYLDEVELFGIPDEAARVNAL 270 DGTT+FS NGTGAF + F PGVR++G++N+NYWK+G P +D E F I D+++RVNAL Sbjct: 203 DGTTDFSKGNGTGAFVREVFEPGVRSVGIKNKNYWKSG-PNVDSFEYFAISDDSSRVNAL 261 Query: 271 LSGDVHWINDVNARSTGRVKGT-PGYTVMETKSGQYTDLVIRQDQAPGNSMDFTLGMKYL 329 LSGD+H +N RS V+ G+ + +T SG YT+L +R D PG+ DF GMKYL Sbjct: 262 LSGDIHLAATINPRSMRLVESQGAGFVLSKTTSGNYTNLNMRLDMEPGSKRDFVEGMKYL 321 Query: 330 LDREQIKMAAFRGYAVTANDQPIDPTNRFYFAGLPQRPFDPEKAKFHLEKAGVLGSTIPI 389 ++REQI +A RG NDQP+ P N ++ L R FDPEKAKFH EKAG+LG +IP+ Sbjct: 322 VNREQIVKSALRGLGEVGNDQPVSPANFYHNPDLKPRAFDPEKAKFHFEKAGMLGQSIPV 381 Query: 390 VASVAATGSVDMAVLMQQSAAKIGLKLDVKRVPADGYWSNQWMKVPVGFGNINPRPSADI 449 VAS AA +VDMA+++Q SAA+IGLKLDV+RVPADGYW N W+K PV FGNINPRP+ DI Sbjct: 382 VASDAANSAVDMAMIIQASAAEIGLKLDVQRVPADGYWDNYWLKAPVHFGNINPRPTPDI 441 Query: 450 LLTQFFKSDAQWN 462 L + + S+A WN Sbjct: 442 LFSLLYSSEAPWN 454 >AGl2824 [E] COG0747 ABC-type dipeptide transport system, periplasmic component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 563 Score = 466 bits (1198), Expect = e-131, Method: Compositional matrix adjust. Identities = 230/432 (53%), Positives = 290/432 (67%) Query: 31 GFTRRDMMRTLLAGSLMTVGGTGLLTASGSVMAQTGKRGGKMRIATQTSSTADTLDPAKT 90 G TRR+++ +LAG + G+ +L + +A T GG ++ A +SSTADTLDPAK Sbjct: 50 GATRRELLHMMLAGGVALSAGSAILGRASKAVAATPVSGGSLKAAGWSSSTADTLDPAKA 109 Query: 91 AHSTDYTRVHMFYNGLTKLDGKLAPQMVLAEEMLTTDAITWTVKLRKGVVFHDGKPFTPA 150 + STDY R Y+ LT LD PQM LAE + T DA TWTVKLR GV FHDGK T Sbjct: 110 SLSTDYVRCCALYSRLTFLDVSGTPQMELAESIETKDAKTWTVKLRSGVTFHDGKSLTAD 169 Query: 151 DVVYSIMRHKDPATASKVKVVADQFESVKATGPNEVQIKLTSANADLPVILATAQFLIIR 210 DVVYS+ RH DPA SKV +A Q KA N V+I L + NADLP ILA F+I+ Sbjct: 170 DVVYSLKRHLDPAVGSKVAKIAAQMTGFKAVDKNTVEITLANPNADLPSILALHHFMIVA 229 Query: 211 DGTTNFSTPNGTGAFKLKEFTPGVRTIGVRNENYWKTGLPYLDEVELFGIPDEAARVNAL 270 DG T+FS NGTGAFKL++F PGVR++ +N NYWK+G P+LD E I D+ ARVNAL Sbjct: 230 DGATDFSKGNGTGAFKLEKFEPGVRSVMAKNANYWKSGGPHLDSFEFMAISDDNARVNAL 289 Query: 271 LSGDVHWINDVNARSTGRVKGTPGYTVMETKSGQYTDLVIRQDQAPGNSMDFTLGMKYLL 330 LSGD+ +N R+ + G + +T SG YT+L IR DQAPGN DF GMK L+ Sbjct: 290 LSGDIQLAAAINPRALRLLDKQDGVVMSKTTSGNYTNLNIRLDQAPGNKTDFVAGMKSLI 349 Query: 331 DREQIKMAAFRGYAVTANDQPIDPTNRFYFAGLPQRPFDPEKAKFHLEKAGVLGSTIPIV 390 +REQI AA RG NDQP+ P + +Y L + FD +KAKFH EKAGV+G +IP++ Sbjct: 350 NREQIIKAALRGLGEVGNDQPVPPMSPYYNPDLKPKAFDLDKAKFHFEKAGVIGQSIPVI 409 Query: 391 ASVAATGSVDMAVLMQQSAAKIGLKLDVKRVPADGYWSNQWMKVPVGFGNINPRPSADIL 450 AS AA S+DMA++MQ SAA+IG+KLDV+RVP+DGYWSN W+K P+ FGNINPRP+ DIL Sbjct: 410 ASDAAGSSIDMAMIMQASAAQIGVKLDVQRVPSDGYWSNYWLKAPIHFGNINPRPTPDIL 469 Query: 451 LTQFFKSDAQWN 462 + + SDA WN Sbjct: 470 FSLLYASDAPWN 481 >mll7034 [E] COG0747 ABC-type dipeptide transport system, periplasmic component Mlo Mesorhizobium loti Length = 505 Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust. Identities = 216/409 (52%), Positives = 277/409 (67%) Query: 54 LLTASGSVMAQTGKRGGKMRIATQTSSTADTLDPAKTAHSTDYTRVHMFYNGLTKLDGKL 113 +L + + +A T GG + A +SSTADTLDPAK + STDY R YN LT LD Sbjct: 15 VLGRATNAVAATPVSGGTFKAAGWSSSTADTLDPAKASLSTDYVRCCSLYNRLTFLDKDG 74 Query: 114 APQMVLAEEMLTTDAITWTVKLRKGVVFHDGKPFTPADVVYSIMRHKDPATASKVKVVAD 173 QM LAE + DA TWTVKLRKGV FHDGK T DVVYS+ RH D + SKV +A Sbjct: 75 VTQMELAESFDSKDAKTWTVKLRKGVTFHDGKDLTADDVVYSLKRHLDKSVGSKVAKIAA 134 Query: 174 QFESVKATGPNEVQIKLTSANADLPVILATAQFLIIRDGTTNFSTPNGTGAFKLKEFTPG 233 Q KA + V+I L NADLP ILA F+I++DGTT+FS NGTGAF L+ F PG Sbjct: 135 QMTGFKAVDKSTVEITLADPNADLPTILALHHFMIVQDGTTDFSKGNGTGAFVLQTFEPG 194 Query: 234 VRTIGVRNENYWKTGLPYLDEVELFGIPDEAARVNALLSGDVHWINDVNARSTGRVKGTP 293 VR++ +N+NYWK+G PYLD E I D++ARVNALLSGD+++ +N R+ + G Sbjct: 195 VRSVVTKNKNYWKSGKPYLDSFEFIAISDDSARVNALLSGDINFAASINPRAMKLIGGQQ 254 Query: 294 GYTVMETKSGQYTDLVIRQDQAPGNSMDFTLGMKYLLDREQIKMAAFRGYAVTANDQPID 353 G+ + +T SG YTDL IR D PGN DF GMKYL++REQI +A RG NDQP+ Sbjct: 255 GFELSKTTSGNYTDLNIRLDMDPGNKADFVAGMKYLVNREQIVKSALRGLGEIGNDQPVS 314 Query: 354 PTNRFYFAGLPQRPFDPEKAKFHLEKAGVLGSTIPIVASVAATGSVDMAVLMQQSAAKIG 413 P N F+ + + FDP+KAKFH +K+G+LG +IP++AS AAT S+DMAV++Q + A IG Sbjct: 315 PANIFHNPDIKPKAFDPDKAKFHFQKSGLLGQSIPVIASDAATSSIDMAVIIQAAGADIG 374 Query: 414 LKLDVKRVPADGYWSNQWMKVPVGFGNINPRPSADILLTQFFKSDAQWN 462 +KLDV+RVP+DGYW N W+K P+ FGNINPRP+ DIL + + S+A WN Sbjct: 375 MKLDVQRVPSDGYWDNYWLKAPIHFGNINPRPTPDILFSLLYASNAPWN 423 >SMc01642 [E] COG0747 ABC-type dipeptide transport system, periplasmic component Sme Sinorhizobium meliloti Length = 538 Score = 252 bits (644), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 151/437 (34%), Positives = 227/437 (51%), Gaps = 8/437 (1%) Query: 30 GGFTRRDMMRTLLAGSLMTVGGTGLLTASGSVMAQTGKRGGKMRIATQTSSTADTLDPAK 89 G RR+ + A +L T + S AQ KRGG +++ + ++ D+ DPAK Sbjct: 24 GKMNRREFLGR--AAALGIAASTANTLFASSAAAQEPKRGGHLKLGLEGAAATDSRDPAK 81 Query: 90 TAHSTDYTRVHMFYNGLTK---LDGKLAPQMVLAEEMLTTDAITWTVKLRKGVVFHDGKP 146 + + + L + G+ P + + E + DA TWT +RKGV FHDGK Sbjct: 82 ALSQFMFVVGRNWGDMLVESHPTTGEPVPALAESWEP-SADAATWTFTIRKGVKFHDGKE 140 Query: 147 FTPADVVYSIMRHKDPATASKVKVVADQFESVKATGPNEVQIKLTSANADLPVILATAQF 206 T DV+ ++ RH D + S V + +KA G +++ + LT NADLP++L Sbjct: 141 LTIDDVIKTLQRHTDEKSESGALGVMKSIKEIKADG-DKLVLTLTEGNADLPLLLTDYHL 199 Query: 207 LIIRDG-TTNFSTPNGTGAFKLKEFTPGVRTIGVRNENYWKTGLPYLDEVELFGIPDEAA 265 +I +G T N GTG +K+ F PGVR RN + W+T Y+D VEL + D A Sbjct: 200 IIQPNGGTDNPDAMIGTGPYKVASFEPGVRATFERNADDWRTDRGYVDSVELIAMNDATA 259 Query: 266 RVNALLSGDVHWINDVNARSTGRVKGTPGYTVMETKSGQYTDLVIRQDQAPGNSMDFTLG 325 R+ AL SG VH+IN V+ ++ +K P ++ T + ++ + AP ++ D + Sbjct: 260 RIAALSSGQVHFINRVDPKTVNLLKKAPTVEILNTSGRGHYVFIMHCNTAPFDNNDLRMA 319 Query: 326 MKYLLDREQIKMAAFRGYAVTANDQPIDPTNRFYFAGLPQRPFDPEKAKFHLEKAGVLGS 385 +KY +DRE + GY ND PI+ T + G+ QR +DP+KA FH +K+G G Sbjct: 320 LKYAMDRETLVQRILGGYGKVGNDFPINDTYALFPEGIEQRAYDPDKAAFHYKKSGHSGP 379 Query: 386 TIPIVASVAATGSVDMAVLMQQSAAKIGLKLDVKRVPADGYWSNQWMKVPVGFGNINPRP 445 + + VA G+VD AVL Q SA K G++++VKR P DGYWSN W P RP Sbjct: 380 VLLRTSDVAFPGAVDAAVLYQASAKKAGIEIEVKREPGDGYWSNVWNVQPFSTSYWGGRP 439 Query: 446 SADILLTQFFKSDAQWN 462 + D + + + S A WN Sbjct: 440 TQDQMYSTAYLSTADWN 456 >mlr9210 [E] COG0747 ABC-type dipeptide transport system, periplasmic component Mlo Mesorhizobium loti Length = 527 Score = 247 bits (630), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 156/435 (35%), Positives = 221/435 (50%), Gaps = 6/435 (1%) Query: 30 GGFTRRDMMRTLLAGSLMTVGGTGLLTASGSVMAQTGKRGGKMRIATQTSSTADTLDPAK 89 G +RRD + A L LL S + A +GG ++ Q + DTLD A Sbjct: 15 GILSRRDFLGRAAALGLSAPFANSLL--SNAARAAQPVKGGTLKAGLQGGAATDTLDTAH 72 Query: 90 TAHSTDYTRVHMFYNGLTKLDGKLAPQMVLAEEMLTT-DAITWTVKLRKGVVFHDGKPFT 148 + S D T + L ++D K Q LAEE ++ DA WT K+RKGV FHDGK T Sbjct: 73 FSTSVDITFGRAWGEQLVQIDPKGGLQPALAEEWGSSKDAKVWTFKIRKGVHFHDGKEMT 132 Query: 149 PADVVYSIMRHKDPATASKVKVVADQFESVKATGPNEVQIKLTSANADLPVILATAQFLI 208 PADV+ ++ RH D + S + + + G N V L NADLP ++ +I Sbjct: 133 PADVLATMERHSDKNSKSGALGIMQGIDKIAVDGQN-VVFTLKDPNADLPFLMDDYHLII 191 Query: 209 IRDG-TTNFSTPNGTGAFKLKEFTPGVRTIGVRNENYWKTGLPYLDEVELFGIPDEAARV 267 +G N + GTG +K+ PGVR G + YW+ + D+VE+ I D AR+ Sbjct: 192 QPNGGKDNPAAGIGTGPYKVTTNEPGVRLGGEKFAGYWRDDRGFADQVEVIVINDATARM 251 Query: 268 NALLSGDVHWINDVNARSTGRVKGTPGYTVMETKSGQYTDLVIRQDQAPGNSMDFTLGMK 327 +AL SG VH +N V + +K PG T+ + V R AP ++ D L +K Sbjct: 252 SALQSGQVHIVNFVQPKLVDLIKRVPGMTIRNVSGRGHYVFVARCKTAPFDNNDLRLALK 311 Query: 328 YLLDREQIKMAAFRGYAVTANDQPIDPTNRFYFAGLPQRPFDPEKAKFHLEKAGVLGSTI 387 + +DR+++ RGY ND PI+ F + QR +DP+KAKFH +K+G G + Sbjct: 312 FAIDRDEMLDKVLRGYGTVGNDFPINAAYPL-FTEVEQRKYDPDKAKFHYKKSGHDGPVL 370 Query: 388 PIVASVAATGSVDMAVLMQQSAAKIGLKLDVKRVPADGYWSNQWMKVPVGFGNINPRPSA 447 + VA G+VD A L QQSAAK G++L++KR P DGYWS W K P RP+ Sbjct: 371 LRTSDVAFPGAVDAAQLFQQSAAKAGIQLEIKREPGDGYWSEVWQKQPFCASYWGGRPTQ 430 Query: 448 DILLTQFFKSDAQWN 462 D + + + S A WN Sbjct: 431 DQMYSVGYYSKADWN 445