BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0149.p (198 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1093 [GEPR] COG0477 Permeases of the major facilitator superf... 130 1e-30 PA2006 [GEPR] COG0477 Permeases of the major facilitator superfa... 123 2e-28 Z3394 [GEPR] COG0477 Permeases of the major facilitator superfam... 121 9e-28 ECs3031 [GEPR] COG0477 Permeases of the major facilitator superf... 121 9e-28 PA0235 [GEPR] COG0477 Permeases of the major facilitator superfa... 121 1e-27 >RSc1093 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 454 Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 84/196 (42%), Positives = 111/196 (56%), Gaps = 2/196 (1%) Query: 2 PVAALFRDGRAAVTVLLWLISFMNLINLYFLSNWLPTLIRDAGYSTSMAVLIGTSLQVGG 61 PV LF T+LLW + FM+L+ +Y ++NWLPTLI G + ++A I Q+GG Sbjct: 249 PVRQLFLPAFRTGTLLLWSVFFMSLLIVYLMTNWLPTLIHSGGVALALASRIAVMYQLGG 308 Query: 62 VVGTLTLGRFINRFGFTRVLGTCFLLACVSIALIGKVAAMPVLLFLAVIVAGFCIVGGQP 121 VG L +GR ++R+ T VL + L + L G + +L +AV GFCI G Q Sbjct: 309 TVGALVIGRMMDRYPATVVLCCTYGLGAGFLVLTG--VSQGTMLAIAVTGVGFCISGSQI 366 Query: 122 AVNALAGTFYPTTLRSTGIGWALGIGRIGSVVGPVIGGQLIALQWSNGSLFIAAAVPALI 181 NA A FYPT R TGI WALGIGR+GSV G +IGG L+A LF+ AVPA I Sbjct: 367 GANAFAAQFYPTASRVTGISWALGIGRLGSVCGALIGGVLLAANIGFQLLFLLVAVPAAI 426 Query: 182 SALTIARLHRTSRGVS 197 ++L I +R V Sbjct: 427 ASLAIFLCGAQARHVE 442 >PA2006 [GEPR] COG0477 Permeases of the major facilitator superfamily Pae Pseudomonas aeruginosa Length = 450 Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 74/185 (40%), Positives = 109/185 (58%), Gaps = 1/185 (0%) Query: 3 VAALFRDGRAAVTVLLWLISFMNLINLYFLSNWLPTLIRDAGYSTSMAVLIGTSLQVGGV 62 V LFR G A T+LLW F++LI LYF+ +WLP+L++++G + + A L + G Sbjct: 243 VLELFRHGYARPTLLLWATFFVSLILLYFMVSWLPSLLQESGLTRNAANLATSMFLFAGT 302 Query: 63 VGTLTLGRFINRF-GFTRVLGTCFLLACVSIALIGKVAAMPVLLFLAVIVAGFCIVGGQP 121 +G + L +R R+L A + L+G P L V AGFCI+GGQ Sbjct: 303 LGAMLLAWLADRLRSKVRLLAAILAGAALFTLLLGLNHDQPRWLLAFVFAAGFCIIGGQL 362 Query: 122 AVNALAGTFYPTTLRSTGIGWALGIGRIGSVVGPVIGGQLIALQWSNGSLFIAAAVPALI 181 +NA A FYP +R+TG GWALG+GR GS++GP+ G L+ + S ++F+ AA+PA + Sbjct: 363 TLNAFASNFYPAQVRATGTGWALGVGRFGSILGPLFGSLLLGMHISVENIFMLAAIPAGL 422 Query: 182 SALTI 186 +AL I Sbjct: 423 AALLI 427 >Z3394 [GEPR] COG0477 Permeases of the major facilitator superfamily EcZ Escherichia coli O157:H7 EDL933 Length = 452 Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 69/187 (36%), Positives = 109/187 (58%) Query: 3 VAALFRDGRAAVTVLLWLISFMNLINLYFLSNWLPTLIRDAGYSTSMAVLIGTSLQVGGV 62 + LF + +T++LW++ FM+L+ +Y LS+W+PTL+ G A + + Q+GG Sbjct: 244 IRQLFMGRQLPITLMLWVVFFMSLLIIYLLSSWMPTLLNHRGIDLQHASWVTAAFQIGGT 303 Query: 63 VGTLTLGRFINRFGFTRVLGTCFLLACVSIALIGKVAAMPVLLFLAVIVAGFCIVGGQPA 122 +G L LG +++F RVL + + + I +IG L+ LA+ G I G Q Sbjct: 304 LGALALGVLMDKFNPFRVLTLSYAIGAICIVMIGLSQDGLWLMALAIFGTGIGISGSQVG 363 Query: 123 VNALAGTFYPTTLRSTGIGWALGIGRIGSVVGPVIGGQLIALQWSNGSLFIAAAVPALIS 182 +NAL T YPT R+TG+ W+ IGR G++VG + GG ++A+ +S +LF AVPA IS Sbjct: 364 LNALTATLYPTQSRATGVSWSNAIGRCGAIVGSLSGGVMMAMNFSFDTLFFIIAVPAAIS 423 Query: 183 ALTIARL 189 A+ + L Sbjct: 424 AVMLTLL 430 >ECs3031 [GEPR] COG0477 Permeases of the major facilitator superfamily Ecs Escherichia coli O157:H7 Length = 452 Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 69/187 (36%), Positives = 109/187 (58%) Query: 3 VAALFRDGRAAVTVLLWLISFMNLINLYFLSNWLPTLIRDAGYSTSMAVLIGTSLQVGGV 62 + LF + +T++LW++ FM+L+ +Y LS+W+PTL+ G A + + Q+GG Sbjct: 244 IRQLFMGRQLPITLMLWVVFFMSLLIIYLLSSWMPTLLNHRGIDLQHASWVTAAFQIGGT 303 Query: 63 VGTLTLGRFINRFGFTRVLGTCFLLACVSIALIGKVAAMPVLLFLAVIVAGFCIVGGQPA 122 +G L LG +++F RVL + + + I +IG L+ LA+ G I G Q Sbjct: 304 LGALALGVLMDKFNPFRVLTLSYAIGAICIVMIGLSQDGLWLMALAIFGTGIGISGSQVG 363 Query: 123 VNALAGTFYPTTLRSTGIGWALGIGRIGSVVGPVIGGQLIALQWSNGSLFIAAAVPALIS 182 +NAL T YPT R+TG+ W+ IGR G++VG + GG ++A+ +S +LF AVPA IS Sbjct: 364 LNALTATLYPTQSRATGVSWSNAIGRCGAIVGSLSGGVMMAMNFSFDTLFFIIAVPAAIS 423 Query: 183 ALTIARL 189 A+ + L Sbjct: 424 AVMLTLL 430 >PA0235 [GEPR] COG0477 Permeases of the major facilitator superfamily Pae Pseudomonas aeruginosa Length = 448 Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 71/164 (43%), Positives = 101/164 (61%) Query: 4 AALFRDGRAAVTVLLWLISFMNLINLYFLSNWLPTLIRDAGYSTSMAVLIGTSLQVGGVV 63 A +F +A T+LLWL FM L+ +Y L++WLPTL+RD+G S A IG Q GGV+ Sbjct: 254 AVIFSGTYSAGTLLLWLTYFMGLVIVYLLTSWLPTLMRDSGASLEQAAFIGALFQFGGVL 313 Query: 64 GTLTLGRFINRFGFTRVLGTCFLLACVSIALIGKVAAMPVLLFLAVIVAGFCIVGGQPAV 123 + +G ++RF +V+G +LLA V +G+ LL V++AG CI G Q A+ Sbjct: 314 SAVAVGWAMDRFNPHKVIGLFYLLAGVFAWCVGQSLGQVTLLATLVLLAGMCINGAQSAM 373 Query: 124 NALAGTFYPTTLRSTGIGWALGIGRIGSVVGPVIGGQLIALQWS 167 +LA FYPT R+TG+ W LGIGR G+++G IG L+ L W+ Sbjct: 374 PSLAARFYPTQGRATGVSWMLGIGRFGAILGAWIGATLLGLGWN 417