BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0122.p (196 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0666 [L] COG2818 3-methyladenine DNA glycosylase Rso Ralstoni... 208 5e-54 Ztag [L] COG2818 3-methyladenine DNA glycosylase EcZ Escherichia... 199 3e-51 ECs4434 [L] COG2818 3-methyladenine DNA glycosylase Ecs Escheric... 199 3e-51 VC1672 [L] COG2818 3-methyladenine DNA glycosylase Vch Vibrio ch... 199 4e-51 STM3642 [L] COG2818 3-methyladenine DNA glycosylase Sty Salmonel... 198 5e-51 >RSp0666 [L] COG2818 3-methyladenine DNA glycosylase Rso Ralstonia solanacearum Length = 190 Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 95/185 (51%), Positives = 127/185 (68%), Gaps = 1/185 (0%) Query: 12 LVRCGWVNLANPRYVQYHDHEWGVPCHDETRLFEMLNLEGAQAGLSWETVLNKRDSYRDA 71 + RC WV +P + YHD EWG P HD+ L+EML LEGAQAGLSW+T+L KR Y++ Sbjct: 1 MSRCCWVG-EDPLMIAYHDTEWGTPSHDDRHLYEMLVLEGAQAGLSWQTILRKRARYQEV 59 Query: 72 FDDWDAEKIARYDERKVAQLLKNPGIVRNRLKVAATIGNARAYLQLREEVGGLDAYLWGK 131 FD +D ++AR+ ++ LL +PGIVRNR KV A + NAR L++++ VG LD +LW Sbjct: 60 FDGFDPARVARFTPARIETLLADPGIVRNRAKVEAAVVNARKVLEVQDAVGSLDGFLWAF 119 Query: 132 VDGQPIVNRWASLADCPAKTPLSDAISKELAKRGFKFVGSTIIYAYLQGVGVINDHVIDC 191 V G+P+VNRW+S D PA T S A+SK LA RGFKFVG TI YA++Q G+++DH C Sbjct: 120 VGGRPVVNRWSSYRDAPASTEASKAMSKALAARGFKFVGPTICYAFMQATGMVDDHEAGC 179 Query: 192 HCHGR 196 G+ Sbjct: 180 FLAGK 184 >Ztag [L] COG2818 3-methyladenine DNA glycosylase EcZ Escherichia coli O157:H7 EDL933 Length = 187 Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 92/183 (50%), Positives = 128/183 (69%), Gaps = 1/183 (0%) Query: 12 LVRCGWVNLANPRYVQYHDHEWGVPCHDETRLFEMLNLEGAQAGLSWETVLNKRDSYRDA 71 + RCGWV+ +P Y+ YHD+EWGVP D +LFEM+ LEG QAGLSW TVL KR++YR Sbjct: 1 MERCGWVS-QDPLYIAYHDNEWGVPETDRKKLFEMICLEGQQAGLSWITVLKKRENYRAC 59 Query: 72 FDDWDAEKIARYDERKVAQLLKNPGIVRNRLKVAATIGNARAYLQLREEVGGLDAYLWGK 131 F +D K+A E V +L+++ GI+R+R K+ A IGNARAYLQ+ + ++W Sbjct: 60 FHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAYLQMEQNGEPFADFVWSF 119 Query: 132 VDGQPIVNRWASLADCPAKTPLSDAISKELAKRGFKFVGSTIIYAYLQGVGVINDHVIDC 191 V+ QP V + +L++ P TP SDA+SK L KRGFKFVG+TI Y+++Q G++NDHV+ C Sbjct: 120 VNHQPQVTQATTLSEIPTSTPASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGC 179 Query: 192 HCH 194 C+ Sbjct: 180 CCY 182 >ECs4434 [L] COG2818 3-methyladenine DNA glycosylase Ecs Escherichia coli O157:H7 Length = 187 Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 92/183 (50%), Positives = 128/183 (69%), Gaps = 1/183 (0%) Query: 12 LVRCGWVNLANPRYVQYHDHEWGVPCHDETRLFEMLNLEGAQAGLSWETVLNKRDSYRDA 71 + RCGWV+ +P Y+ YHD+EWGVP D +LFEM+ LEG QAGLSW TVL KR++YR Sbjct: 1 MERCGWVS-QDPLYIAYHDNEWGVPETDRKKLFEMICLEGQQAGLSWITVLKKRENYRAC 59 Query: 72 FDDWDAEKIARYDERKVAQLLKNPGIVRNRLKVAATIGNARAYLQLREEVGGLDAYLWGK 131 F +D K+A E V +L+++ GI+R+R K+ A IGNARAYLQ+ + ++W Sbjct: 60 FHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAYLQMEQNGEPFADFVWSF 119 Query: 132 VDGQPIVNRWASLADCPAKTPLSDAISKELAKRGFKFVGSTIIYAYLQGVGVINDHVIDC 191 V+ QP V + +L++ P TP SDA+SK L KRGFKFVG+TI Y+++Q G++NDHV+ C Sbjct: 120 VNHQPQVTQATTLSEIPTSTPASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGC 179 Query: 192 HCH 194 C+ Sbjct: 180 CCY 182 >VC1672 [L] COG2818 3-methyladenine DNA glycosylase Vch Vibrio cholerae Length = 193 Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 94/180 (52%), Positives = 124/180 (68%), Gaps = 1/180 (0%) Query: 15 CGWVNLANPRYVQYHDHEWGVPCHDETRLFEMLNLEGAQAGLSWETVLNKRDSYRDAFDD 74 C W + +P +YHD EWG HD+T+LFE L LEGAQAGLSW TVL KR+ YR AF Sbjct: 9 CAWA-MNHPLEREYHDKEWGRAVHDDTKLFEFLTLEGAQAGLSWLTVLKKREGYRQAFLG 67 Query: 75 WDAEKIARYDERKVAQLLKNPGIVRNRLKVAATIGNARAYLQLREEVGGLDAYLWGKVDG 134 +D +++A+ DE V Q++ +V++R K+A+ NARA L L++E G LDA LW V G Sbjct: 68 YDLQRLAQCDESHVEQIIAEYDVVKHRGKIASVFSNARAALALQQEFGSLDAALWQFVGG 127 Query: 135 QPIVNRWASLADCPAKTPLSDAISKELAKRGFKFVGSTIIYAYLQGVGVINDHVIDCHCH 194 QP +NRW S++D PA T S A+SK L KRGFKFVG TI YA++Q G++NDH++ C H Sbjct: 128 QPKINRWVSMSDVPASTEESKAMSKFLKKRGFKFVGETICYAFMQACGLVNDHLVGCPNH 187 >STM3642 [L] COG2818 3-methyladenine DNA glycosylase Sty Salmonella typhimurium LT2 Length = 193 Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 92/183 (50%), Positives = 124/183 (67%), Gaps = 1/183 (0%) Query: 12 LVRCGWVNLANPRYVQYHDHEWGVPCHDETRLFEMLNLEGAQAGLSWETVLNKRDSYRDA 71 + RC WV+ +P Y+ YHD+EWGVP D +LFEM+ LEG QAGLSW TVL KR++YR Sbjct: 1 MQRCDWVS-QDPLYIAYHDNEWGVPETDSRKLFEMICLEGQQAGLSWITVLKKRENYRAC 59 Query: 72 FDDWDAEKIARYDERKVAQLLKNPGIVRNRLKVAATIGNARAYLQLREEVGGLDAYLWGK 131 F +D +IA E V LL+N GI+R+R K+ A I NARA+L + + ++W Sbjct: 60 FHQFDPVRIAAMQEEDVEHLLQNTGIIRHRGKIQAIISNARAWLAMEQNGESFADFVWSF 119 Query: 132 VDGQPIVNRWASLADCPAKTPLSDAISKELAKRGFKFVGSTIIYAYLQGVGVINDHVIDC 191 VDGQP + + ASL + P TP SDA++K L KRGFKFVG+TI Y+++Q G++NDH+ C Sbjct: 120 VDGQPQITQAASLDEIPTSTPASDALAKALKKRGFKFVGTTICYSFMQACGLVNDHITGC 179 Query: 192 HCH 194 CH Sbjct: 180 FCH 182