BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0089.p (532 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1453 [R] COG0488 ATPase components of ABC transporters with d... 879 0.0 ybiT [R] COG0488 ATPase components of ABC transporters with dupl... 799 0.0 ZybiT [R] COG0488 ATPase components of ABC transporters with dup... 799 0.0 ECs0897 [R] COG0488 ATPase components of ABC transporters with d... 799 0.0 STM0838 [R] COG0488 ATPase components of ABC transporters with d... 785 0.0 >RSc1453 [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains Rso Ralstonia solanacearum Length = 540 Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/539 (78%), Positives = 469/539 (87%), Gaps = 7/539 (1%) Query: 1 VLSTANITMQFGAKPLFENISVKFGDGNRYGLIGANGCGKSTFMKILGGDLEPSGGNVSL 60 +LSTANITMQFG KPLFENISVKFG+GNRYGLIGANGCGKSTFMKILG DLEPS GNV L Sbjct: 1 MLSTANITMQFGPKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILGSDLEPSAGNVML 60 Query: 61 DVNERLGKLRQDQFAYEEMRVLDVVMMGHVEMWAAMSERDAIYANPDATDDDYMKAADLE 120 + RLGKLRQDQFAYE+MRVLDVVMMGH EMWAA ERDAIYANP+ATDDDYMKAADLE Sbjct: 61 EPGVRLGKLRQDQFAYEDMRVLDVVMMGHTEMWAAAQERDAIYANPEATDDDYMKAADLE 120 Query: 121 AKFAEYDGYTAEARAGELLLGVGVPIEQHTGPMSNVAPGWKLRVLLAQALFSNPDILLLD 180 AK+AEYDGYTAEARAGELLLGVG+PI+QH GPMS+VAPGWKLRVLLAQALFSNPD+LLLD Sbjct: 121 AKYAEYDGYTAEARAGELLLGVGIPIDQHNGPMSSVAPGWKLRVLLAQALFSNPDVLLLD 180 Query: 181 EPTNNLDIDTIRWLEEVLNERNSTMIIISHDRHFLNQVCTHMADMDYGTLKIYPGNYDDY 240 EPTNNLDI+TIRWLE VLNERNSTMIIISHDRHFLN VCTHMADMDYGTLK+YPGNYDDY Sbjct: 181 EPTNNLDINTIRWLESVLNERNSTMIIISHDRHFLNSVCTHMADMDYGTLKVYPGNYDDY 240 Query: 241 MLASSQARAQQLAVNAKAKEKVAELQDFVRRFSANKSKARQATSRAKQIDKIKVEDIKPS 300 M AS QAR + A NA+AKE++++LQDFVRRFSANKSKARQATSR K IDKIKVEDIKPS Sbjct: 241 MEASIQARERLQAANARAKERISDLQDFVRRFSANKSKARQATSRLKMIDKIKVEDIKPS 300 Query: 301 SRVNPFVRFEGEKKLHRLAVETQSITKTYDRDIFKNFSIMVEAGEKIAIIGANGAGKTTL 360 SR NPF+RFE EKKLH LAVE ++ KTYDR IF ++ V AGEKIAIIG NGAGKTTL Sbjct: 301 SRQNPFIRFEFEKKLHNLAVEAENARKTYDRKIFDGLTMAVRAGEKIAIIGENGAGKTTL 360 Query: 361 LRSI------GGDVTGLHPDSGEVKWAENANVGYMPQDPTEEFAGGETLTDWMGKWTQEG 414 LRS+ G G+ D G +KWAE+ANVGYMPQD EEF L DWM +WTQ G Sbjct: 361 LRSLLNHSVKTGVQRGIDVDGGIIKWAEHANVGYMPQDTYEEFPEDRDLMDWMSQWTQAG 420 Query: 415 DDDQAVRGILGRLLFSGDDVKKSVKVLSGGEKGRMMYGKLMLGRHNVLLMDEPTNHMDME 474 DDDQ++RG +GRLLFS DD+KKSVKVLSGGEKGRM++GKLMLGRHNVL +DEPTNHMDME Sbjct: 421 DDDQSLRGTMGRLLFSADDIKKSVKVLSGGEKGRMIWGKLMLGRHNVLALDEPTNHMDME 480 Query: 475 SIESLNIALEKYAGTLIFVSHDREFVSSLATRILEVK-NGQVIDFQGGYEDYLASQGIE 532 SIESL +AL+K+ GTLIFVSHDREFVS LATR++EV+ +G + D+ G Y++YL SQG+E Sbjct: 481 SIESLQVALDKFEGTLIFVSHDREFVSGLATRVIEVRPDGTLTDYLGTYDEYLQSQGVE 539 >ybiT [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains Eco Escherichia coli K12 Length = 530 Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/533 (70%), Positives = 450/533 (84%), Gaps = 4/533 (0%) Query: 1 VLSTANITMQFGAKPLFENISVKFGDGNRYGLIGANGCGKSTFMKILGGDLEPSGGNVSL 60 +L ++N+TMQFG+KPLFENISVKFG GNRYGLIGANG GKSTFMKILGGDLEP+ GNVSL Sbjct: 1 MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSL 60 Query: 61 DVNERLGKLRQDQFAYEEMRVLDVVMMGHVEMWAAMSERDAIYANPDATDDDYMKAADLE 120 D NER+GKLRQDQFA+EE VLD V+MGH E+W ERD IYA P+ +++D K ADLE Sbjct: 61 DPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRIYALPEMSEEDGYKVADLE 120 Query: 121 AKFAEYDGYTAEARAGELLLGVGVPIEQHTGPMSNVAPGWKLRVLLAQALFSNPDILLLD 180 K+ E DGY+AEARAGELLLGVG+P+EQH GPMS VAPGWKLRVLLAQALF++PDILLLD Sbjct: 121 VKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFADPDILLLD 180 Query: 181 EPTNNLDIDTIRWLEEVLNERNSTMIIISHDRHFLNQVCTHMADMDYGTLKIYPGNYDDY 240 EPTNNLDIDTIRWLE+VLNER+STMIIISHDRHFLN VCTHMAD+DYG L++YPGNYD+Y Sbjct: 181 EPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEY 240 Query: 241 MLASSQARAQQLAVNAKAKEKVAELQDFVRRFSANKSKARQATSRAKQIDKIKVEDIKPS 300 M A++QAR + LA NAK K ++AELQ FV RFSAN SK+RQATSRA+QIDKIK+E++K S Sbjct: 241 MTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRARQIDKIKLEEVKAS 300 Query: 301 SRVNPFVRFEGEKKLHRLAVETQSITKTYDR-DIFKNFSIMVEAGEKIAIIGANGAGKTT 359 SR NPF+RFE +KKL R A+E + +TK +D +FKN ++++E GEK+A++G NG GK+T Sbjct: 301 SRQNPFIRFEQDKKLFRNALEVEGLTKGFDNGPLFKNLNLLLEVGEKLAVLGTNGVGKST 360 Query: 360 LLRSIGGDVTGLHPDSGEVKWAENANVGYMPQDPTEEFAGGETLTDWMGKWTQEGDDDQA 419 LL+++ GD L PDSG VKW+ENA +GY QD EF T+ +WM +W QEGDD+QA Sbjct: 361 LLKTLVGD---LQPDSGTVKWSENARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQA 417 Query: 420 VRGILGRLLFSGDDVKKSVKVLSGGEKGRMMYGKLMLGRHNVLLMDEPTNHMDMESIESL 479 VR ILGRLLFS DD+KK KVLSGGEKGRM++GKLM+ + N+L+MDEPTNH+DMESIESL Sbjct: 418 VRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESL 477 Query: 480 NIALEKYAGTLIFVSHDREFVSSLATRILEVKNGQVIDFQGGYEDYLASQGIE 532 N+ALE Y GTLIFVSHDREFVSSLATRILE+ +VIDF G YEDYL S+GIE Sbjct: 478 NMALELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDYLRSKGIE 530 >ZybiT [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains EcZ Escherichia coli O157:H7 EDL933 Length = 530 Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/533 (70%), Positives = 450/533 (84%), Gaps = 4/533 (0%) Query: 1 VLSTANITMQFGAKPLFENISVKFGDGNRYGLIGANGCGKSTFMKILGGDLEPSGGNVSL 60 +L ++N+TMQFG+KPLFENISVKFG GNRYGLIGANG GKSTFMKILGGDLEP+ GNVSL Sbjct: 1 MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSL 60 Query: 61 DVNERLGKLRQDQFAYEEMRVLDVVMMGHVEMWAAMSERDAIYANPDATDDDYMKAADLE 120 D NER+GKLRQDQFA+EE VLD V+MGH E+W ERD IYA P+ +++D K ADLE Sbjct: 61 DPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRIYALPEMSEEDGYKVADLE 120 Query: 121 AKFAEYDGYTAEARAGELLLGVGVPIEQHTGPMSNVAPGWKLRVLLAQALFSNPDILLLD 180 K+ E DGY+AEARAGELLLGVG+P+EQH GPMS VAPGWKLRVLLAQALF++PDILLLD Sbjct: 121 VKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFADPDILLLD 180 Query: 181 EPTNNLDIDTIRWLEEVLNERNSTMIIISHDRHFLNQVCTHMADMDYGTLKIYPGNYDDY 240 EPTNNLDIDTIRWLE+VLNER+STMIIISHDRHFLN VCTHMAD+DYG L++YPGNYD+Y Sbjct: 181 EPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEY 240 Query: 241 MLASSQARAQQLAVNAKAKEKVAELQDFVRRFSANKSKARQATSRAKQIDKIKVEDIKPS 300 M A++QAR + LA NAK K ++AELQ FV RFSAN SK+RQATSRA+QIDKIK+E++K S Sbjct: 241 MTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRARQIDKIKLEEVKAS 300 Query: 301 SRVNPFVRFEGEKKLHRLAVETQSITKTYDR-DIFKNFSIMVEAGEKIAIIGANGAGKTT 359 SR NPF+RFE +KKL R A+E + +TK +D +FKN ++++E GEK+A++G NG GK+T Sbjct: 301 SRQNPFIRFEQDKKLFRNALEVEGLTKGFDNGPLFKNLNLLLEVGEKLAVLGTNGVGKST 360 Query: 360 LLRSIGGDVTGLHPDSGEVKWAENANVGYMPQDPTEEFAGGETLTDWMGKWTQEGDDDQA 419 LL+++ GD L PDSG VKW+ENA +GY QD EF T+ +WM +W QEGDD+QA Sbjct: 361 LLKTLVGD---LQPDSGTVKWSENARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQA 417 Query: 420 VRGILGRLLFSGDDVKKSVKVLSGGEKGRMMYGKLMLGRHNVLLMDEPTNHMDMESIESL 479 VR ILGRLLFS DD+KK KVLSGGEKGRM++GKLM+ + N+L+MDEPTNH+DMESIESL Sbjct: 418 VRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESL 477 Query: 480 NIALEKYAGTLIFVSHDREFVSSLATRILEVKNGQVIDFQGGYEDYLASQGIE 532 N+ALE Y GTLIFVSHDREFVSSLATRILE+ +VIDF G YEDYL S+GIE Sbjct: 478 NMALELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDYLRSKGIE 530 >ECs0897 [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains Ecs Escherichia coli O157:H7 Length = 530 Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/533 (70%), Positives = 450/533 (84%), Gaps = 4/533 (0%) Query: 1 VLSTANITMQFGAKPLFENISVKFGDGNRYGLIGANGCGKSTFMKILGGDLEPSGGNVSL 60 +L ++N+TMQFG+KPLFENISVKFG GNRYGLIGANG GKSTFMKILGGDLEP+ GNVSL Sbjct: 1 MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSL 60 Query: 61 DVNERLGKLRQDQFAYEEMRVLDVVMMGHVEMWAAMSERDAIYANPDATDDDYMKAADLE 120 D NER+GKLRQDQFA+EE VLD V+MGH E+W ERD IYA P+ +++D K ADLE Sbjct: 61 DPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRIYALPEMSEEDGYKVADLE 120 Query: 121 AKFAEYDGYTAEARAGELLLGVGVPIEQHTGPMSNVAPGWKLRVLLAQALFSNPDILLLD 180 K+ E DGY+AEARAGELLLGVG+P+EQH GPMS VAPGWKLRVLLAQALF++PDILLLD Sbjct: 121 VKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFADPDILLLD 180 Query: 181 EPTNNLDIDTIRWLEEVLNERNSTMIIISHDRHFLNQVCTHMADMDYGTLKIYPGNYDDY 240 EPTNNLDIDTIRWLE+VLNER+STMIIISHDRHFLN VCTHMAD+DYG L++YPGNYD+Y Sbjct: 181 EPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEY 240 Query: 241 MLASSQARAQQLAVNAKAKEKVAELQDFVRRFSANKSKARQATSRAKQIDKIKVEDIKPS 300 M A++QAR + LA NAK K ++AELQ FV RFSAN SK+RQATSRA+QIDKIK+E++K S Sbjct: 241 MTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRARQIDKIKLEEVKAS 300 Query: 301 SRVNPFVRFEGEKKLHRLAVETQSITKTYDR-DIFKNFSIMVEAGEKIAIIGANGAGKTT 359 SR NPF+RFE +KKL R A+E + +TK +D +FKN ++++E GEK+A++G NG GK+T Sbjct: 301 SRQNPFIRFEQDKKLFRNALEVEGLTKGFDNGPLFKNLNLLLEVGEKLAVLGTNGVGKST 360 Query: 360 LLRSIGGDVTGLHPDSGEVKWAENANVGYMPQDPTEEFAGGETLTDWMGKWTQEGDDDQA 419 LL+++ GD L PDSG VKW+ENA +GY QD EF T+ +WM +W QEGDD+QA Sbjct: 361 LLKTLVGD---LQPDSGTVKWSENARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQA 417 Query: 420 VRGILGRLLFSGDDVKKSVKVLSGGEKGRMMYGKLMLGRHNVLLMDEPTNHMDMESIESL 479 VR ILGRLLFS DD+KK KVLSGGEKGRM++GKLM+ + N+L+MDEPTNH+DMESIESL Sbjct: 418 VRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESL 477 Query: 480 NIALEKYAGTLIFVSHDREFVSSLATRILEVKNGQVIDFQGGYEDYLASQGIE 532 N+ALE Y GTLIFVSHDREFVSSLATRILE+ +VIDF G YEDYL S+GIE Sbjct: 478 NMALELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDYLRSKGIE 530 >STM0838 [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains Sty Salmonella typhimurium LT2 Length = 530 Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/533 (69%), Positives = 447/533 (83%), Gaps = 4/533 (0%) Query: 1 VLSTANITMQFGAKPLFENISVKFGDGNRYGLIGANGCGKSTFMKILGGDLEPSGGNVSL 60 +L ++N+TMQFG+KPLFENISVKFG GNRYGLIGANG GKSTFMKILGGDLEP+ GNVSL Sbjct: 1 MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSL 60 Query: 61 DVNERLGKLRQDQFAYEEMRVLDVVMMGHVEMWAAMSERDAIYANPDATDDDYMKAADLE 120 D NER+GKLRQDQFA+E VLD V+MGH E+W ERD IYA P+ +++D K ADLE Sbjct: 61 DPNERIGKLRQDQFAFETFTVLDTVIMGHGELWEVKQERDRIYALPEMSEEDGYKVADLE 120 Query: 121 AKFAEYDGYTAEARAGELLLGVGVPIEQHTGPMSNVAPGWKLRVLLAQALFSNPDILLLD 180 K+ E DGY+AEARAGELLLGVG+P+EQH G MS VAPGWKLRVLLAQALFSNPDILLLD Sbjct: 121 VKYGEMDGYSAEARAGELLLGVGIPLEQHYGLMSEVAPGWKLRVLLAQALFSNPDILLLD 180 Query: 181 EPTNNLDIDTIRWLEEVLNERNSTMIIISHDRHFLNQVCTHMADMDYGTLKIYPGNYDDY 240 EPTNNLDIDTIRWLE+VLNER+STMIIISHDRHFLN VCTHMAD+DYG L++YPGNYD+Y Sbjct: 181 EPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGDLRVYPGNYDEY 240 Query: 241 MLASSQARAQQLAVNAKAKEKVAELQDFVRRFSANKSKARQATSRAKQIDKIKVEDIKPS 300 M A++QAR + LA NAK K ++AELQ FV RFSAN SK+RQATSRA+QIDKIK+E++K S Sbjct: 241 MTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRARQIDKIKLEEVKAS 300 Query: 301 SRVNPFVRFEGEKKLHRLAVETQSITKTYDR-DIFKNFSIMVEAGEKIAIIGANGAGKTT 359 SR NPF+RFE +KKL R A+E +++TK +D +FKN ++++E GEK+A++G NG GK+T Sbjct: 301 SRQNPFIRFEQDKKLFRNALEVEALTKGFDNGPLFKNVNLLLEVGEKLAVLGTNGVGKST 360 Query: 360 LLRSIGGDVTGLHPDSGEVKWAENANVGYMPQDPTEEFAGGETLTDWMGKWTQEGDDDQA 419 LL+++ GD L D G VKW+ENA +GY QD EF T+ +WM +W QEGDD+QA Sbjct: 361 LLKTLVGD---LDADHGTVKWSENARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQA 417 Query: 420 VRGILGRLLFSGDDVKKSVKVLSGGEKGRMMYGKLMLGRHNVLLMDEPTNHMDMESIESL 479 VR ILGRLLFS DD+KK KVLSGGEKGRM++GKLM+ + N+L+MDEPTNH+DMESIESL Sbjct: 418 VRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESL 477 Query: 480 NIALEKYAGTLIFVSHDREFVSSLATRILEVKNGQVIDFQGGYEDYLASQGIE 532 N+ALE Y GTLIFVSHDREFVSSLATR++E+ +V+DF G Y+DYL S+GIE Sbjct: 478 NMALELYQGTLIFVSHDREFVSSLATRVIEITPERVVDFSGNYDDYLRSKGIE 530