BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0066.p         (162 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1556 [C] COG0277 FAD/FMN-containing dehydrogenases Rso Ralsto...   129   2e-30
BMEI1527 [C] COG0277 FAD/FMN-containing dehydrogenases Bme Bruce...   114   1e-25
mlr7440 [C] COG0277 FAD/FMN-containing dehydrogenases Mlo Mesorh...   106   2e-23
SMc00985 [C] COG0277 FAD/FMN-containing dehydrogenases Sme Sinor...    96   2e-20
AGc1314 [C] COG0277 FAD/FMN-containing dehydrogenases Atu Agroba...    91   1e-18

>RSc1556 [C] COG0277 FAD/FMN-containing dehydrogenases Rso Ralstonia
           solanacearum
          Length = 470

 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 61/108 (56%), Positives = 78/108 (72%)

Query: 16  VGDAGLVTAADEQAPYVKDWLNKWQGRVAVVVRPADTAQTAEVVRLCHQTHTPIVTQGGN 75
           +G A ++TA ++QAPY+ DW  ++ GR   V+RPAD  Q A +VRLC     PIV QGGN
Sbjct: 14  IGGAHVLTAPEDQAPYLTDWRKRFTGRARAVLRPADPEQVAALVRLCAGHGVPIVPQGGN 73

Query: 76  TGMSGGATPDDSGAQVILSTTRMNRIRAVDPINNTMTVDAGVILAHAQ 123
           TG+ GGATPD +G  V++S  R+ R+RAVDPINNT+TVDAG ILA  Q
Sbjct: 74  TGLCGGATPDAAGTAVVISLQRLQRVRAVDPINNTITVDAGCILASVQ 121


>BMEI1527 [C] COG0277 FAD/FMN-containing dehydrogenases Bme Brucella
           melitensis
          Length = 470

 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 83/119 (69%)

Query: 8   LIEQLRSIVGDAGLVTAADEQAPYVKDWLNKWQGRVAVVVRPADTAQTAEVVRLCHQTHT 67
           LIE+  +IVG+   +TA ++ A Y+ +  + + GR  +V+RP  T + A +++L  +T T
Sbjct: 6   LIERFAAIVGEKNALTAPEDIAAYLIEQRDLYHGRTPLVLRPGSTEEVAAIMKLATETRT 65

Query: 68  PIVTQGGNTGMSGGATPDDSGAQVILSTTRMNRIRAVDPINNTMTVDAGVILAHAQEAA 126
           P+V QGGNTG+ GG  PD+SGA +ILS  RMNRIR +D + N +T++AGVIL + Q+AA
Sbjct: 66  PVVPQGGNTGLVGGQQPDESGAAIILSLGRMNRIRNLDTVGNLVTLEAGVILKNLQDAA 124


>mlr7440 [C] COG0277 FAD/FMN-containing dehydrogenases Mlo Mesorhizobium
           loti
          Length = 476

 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 81/130 (62%), Gaps = 4/130 (3%)

Query: 1   MNENTQQL----IEQLRSIVGDAGLVTAADEQAPYVKDWLNKWQGRVAVVVRPADTAQTA 56
           M E  Q+L    I++  +IVGD   +    + APY+ +    W G  ++V+RP    + +
Sbjct: 1   MTEILQKLDPALIDRFAAIVGDKYALRDEQDIAPYLIERRGLWHGATSLVLRPGSVDEVS 60

Query: 57  EVVRLCHQTHTPIVTQGGNTGMSGGATPDDSGAQVILSTTRMNRIRAVDPINNTMTVDAG 116
            ++RL  +T TPIV Q GNTG+ G   PD SG ++ILS +R+NRIR +D ++NT+T +AG
Sbjct: 61  RIMRLATETGTPIVPQSGNTGLVGAQVPDKSGREIILSLSRLNRIREIDILSNTVTAEAG 120

Query: 117 VILAHAQEAA 126
           VIL   QEAA
Sbjct: 121 VILQTLQEAA 130


>SMc00985 [C] COG0277 FAD/FMN-containing dehydrogenases Sme Sinorhizobium
           meliloti
          Length = 496

 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 71/122 (58%)

Query: 5   TQQLIEQLRSIVGDAGLVTAADEQAPYVKDWLNKWQGRVAVVVRPADTAQTAEVVRLCHQ 64
           + +LI     IVG    +TA  + APY+ +    ++G   +V+RP    + + V+RL  Q
Sbjct: 23  SPELIASFVDIVGPGNALTAPADTAPYLVESRGLYRGTTPLVLRPGSVEEVSLVMRLASQ 82

Query: 65  THTPIVTQGGNTGMSGGATPDDSGAQVILSTTRMNRIRAVDPINNTMTVDAGVILAHAQE 124
           T T +V QGGNTG   G  P +  A V+LS  R+NRIR +DP+ N +  DAG ILA  Q+
Sbjct: 83  TRTAVVPQGGNTGHVAGQIPREGKADVVLSLERLNRIRDIDPVGNVIVADAGCILADIQK 142

Query: 125 AA 126
           AA
Sbjct: 143 AA 144


>AGc1314 [C] COG0277 FAD/FMN-containing dehydrogenases Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 478

 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 71/122 (58%)

Query: 5   TQQLIEQLRSIVGDAGLVTAADEQAPYVKDWLNKWQGRVAVVVRPADTAQTAEVVRLCHQ 64
           +  ++++  +IVG+   V    E AP + +    ++G   ++++P    + A +++L  +
Sbjct: 9   SSDILDRFTAIVGEKNAVRDLAEMAPRLVENRGLYRGASPLLLKPGSVEEVAAILKLASE 68

Query: 65  THTPIVTQGGNTGMSGGATPDDSGAQVILSTTRMNRIRAVDPINNTMTVDAGVILAHAQE 124
           T TPIV Q GNTG+ GG TP   G  +ILS  RMNRIR +DP+ N +  DAG IL    +
Sbjct: 69  TGTPIVPQTGNTGLVGGQTPRADGTDIILSLERMNRIRDIDPVANIIVADAGCILDDIHK 128

Query: 125 AA 126
           AA
Sbjct: 129 AA 130