BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0064.p         (80 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BMEII0342 [E] COG0410 ABC-type branched-chain amino acid transpo...    94   9e-20
SMc03119 [E] COG0410 ABC-type branched-chain amino acid transpor...    92   2e-19
livF [E] COG0410 ABC-type branched-chain amino acid transport sy...    92   3e-19
ZlivF [E] COG0410 ABC-type branched-chain amino acid transport s...    92   3e-19
ECs4301 [E] COG0410 ABC-type branched-chain amino acid transport...    92   3e-19

>BMEII0342 [E] COG0410 ABC-type branched-chain amino acid transport systems,
           ATPase component Bme Brucella melitensis
          Length = 274

 Score = 93.6 bits (231), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 43/76 (56%), Positives = 60/76 (78%)

Query: 1   MSGGEQQMLTIARTLMGNPHLLLLDEPSEGVAPVIVEQMANMILQLKRRGMSILLCEQNT 60
           +SGGEQQML IAR L     +LLLDEP+EG+APVIV+++ +++++LK+RGM++LL EQN 
Sbjct: 175 LSGGEQQMLAIARILRTGVKVLLLDEPTEGLAPVIVQRIGDVLVELKKRGMTVLLVEQNF 234

Query: 61  HFAGLVSDRSYTLDQG 76
            FA  V+DR Y +D G
Sbjct: 235 RFAAKVADRFYLMDHG 250


>SMc03119 [E] COG0410 ABC-type branched-chain amino acid transport systems,
           ATPase component Sme Sinorhizobium meliloti
          Length = 233

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 59/78 (75%)

Query: 1   MSGGEQQMLTIARTLMGNPHLLLLDEPSEGVAPVIVEQMANMILQLKRRGMSILLCEQNT 60
           +SGGEQQML IAR L     ++LLDEP+EG+APVIV+++  ++ +LK RGM++LL EQN 
Sbjct: 134 LSGGEQQMLAIARILRTGVRMMLLDEPTEGLAPVIVQRIGEVLKKLKERGMTVLLVEQNF 193

Query: 61  HFAGLVSDRSYTLDQGRM 78
            FA  V+DR Y +D GR+
Sbjct: 194 RFASKVADRFYLMDHGRV 211


>livF [E] COG0410 ABC-type branched-chain amino acid transport systems,
           ATPase component Eco Escherichia coli K12
          Length = 241

 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 44/79 (55%), Positives = 59/79 (74%)

Query: 1   MSGGEQQMLTIARTLMGNPHLLLLDEPSEGVAPVIVEQMANMILQLKRRGMSILLCEQNT 60
           MSGGEQQML I R LM NP LLLLDEPS G+AP+I++Q+ + I QL+ +GM+I L EQN 
Sbjct: 142 MSGGEQQMLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNA 201

Query: 61  HFAGLVSDRSYTLDQGRML 79
           + A  ++DR Y L+ G ++
Sbjct: 202 NQALKLADRGYVLENGHVV 220


>ZlivF [E] COG0410 ABC-type branched-chain amino acid transport systems,
           ATPase component EcZ Escherichia coli O157:H7 EDL933
          Length = 241

 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 44/79 (55%), Positives = 59/79 (74%)

Query: 1   MSGGEQQMLTIARTLMGNPHLLLLDEPSEGVAPVIVEQMANMILQLKRRGMSILLCEQNT 60
           MSGGEQQML I R LM NP LLLLDEPS G+AP+I++Q+ + I QL+ +GM+I L EQN 
Sbjct: 142 MSGGEQQMLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNA 201

Query: 61  HFAGLVSDRSYTLDQGRML 79
           + A  ++DR Y L+ G ++
Sbjct: 202 NQALKLADRGYVLENGHVV 220


>ECs4301 [E] COG0410 ABC-type branched-chain amino acid transport systems,
           ATPase component Ecs Escherichia coli O157:H7
          Length = 241

 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 44/79 (55%), Positives = 59/79 (74%)

Query: 1   MSGGEQQMLTIARTLMGNPHLLLLDEPSEGVAPVIVEQMANMILQLKRRGMSILLCEQNT 60
           MSGGEQQML I R LM NP LLLLDEPS G+AP+I++Q+ + I QL+ +GM+I L EQN 
Sbjct: 142 MSGGEQQMLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNA 201

Query: 61  HFAGLVSDRSYTLDQGRML 79
           + A  ++DR Y L+ G ++
Sbjct: 202 NQALKLADRGYVLENGHVV 220