BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0063.p (546 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll8067_5 [T] COG0642 Signal transduction histidine kinase Mlo M... 237 5e-62 AGl1617_2 [T] COG0642 Signal transduction histidine kinase Atu A... 216 2e-55 mll2384_2 [T] COG0642 Signal transduction histidine kinase Mlo M... 208 2e-53 CC3225_2 [T] COG0642 Signal transduction histidine kinase Ccr Ca... 208 3e-53 ECs5074_1 [T] COG0642 Signal transduction histidine kinase Ecs E... 199 2e-50 >mll8067_5 [T] COG0642 Signal transduction histidine kinase Mlo Mesorhizobium loti Length = 297 Score = 237 bits (605), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 125/251 (49%), Positives = 166/251 (66%), Gaps = 4/251 (1%) Query: 150 DISRRRDAEQALGQARKMEALGQLTGGIAHDFNNLLQVISGYLDIINLALRSDTPDLGRV 209 +++ R AE+ L Q +KM+A+GQLTGGIAHDFNN+L VI G L+++ L D+GR Sbjct: 27 EVAERSKAEEQLRQVQKMDAVGQLTGGIAHDFNNMLAVIIGGLNLLQRKLSKGETDVGRF 86 Query: 210 SRSADSIRKASGKAAMLTQQLLAFARKQRLEGRTINLNSLTEGFTDLVQRTLGGDIEVQT 269 A + +AA LTQ+LLAF+R+Q L+ IN N L G T+L+ RTLG I+V+T Sbjct: 87 VEGA---MDGAHRAAALTQRLLAFSRQQPLKPEPINANRLVGGMTELLMRTLGETIKVET 143 Query: 270 ELASGLWNCRLDPTQMEVALLNVLINARDAMSGKGTVKIHTSNEDLSSEDRAIQLGVKPG 329 +GLW + DP+Q+E ALLN+ +NARDAM G + I TSN + E A + + G Sbjct: 144 AFGAGLWQVKADPSQLESALLNLSVNARDAMPNGGKLTIETSNAYV-DERYARESAIAAG 202 Query: 330 LYVCIAVTDNGPGIPADILPRVMDPFFTTKDEGKGTGLGLSMVYGFVKQSGGSVRIVSSA 389 +V +AVTD G G+ D+L + DPF+TTK GKGTGLGLS VYGFV+QSGG+VRI S Sbjct: 203 QFVLVAVTDTGTGMTPDVLAKAFDPFYTTKGVGKGTGLGLSQVYGFVRQSGGNVRIYSEP 262 Query: 390 ERGTTVSIYFP 400 GTT+ IY P Sbjct: 263 GVGTTIKIYLP 273 >AGl1617_2 [T] COG0642 Signal transduction histidine kinase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 249 Score = 216 bits (549), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 116/232 (50%), Positives = 143/232 (61%), Gaps = 4/232 (1%) Query: 169 ALGQLTGGIAHDFNNLLQVISGYLDIINLALRSDTPDLGRVSRSADSIRKASGKAAMLTQ 228 ++GQLTGG+AHDFNNLLQVI+G L + L D R R ++ + A L Sbjct: 1 SIGQLTGGVAHDFNNLLQVIAGNLQL----LSKDVIGNERAERRLENALAGVHRGAKLAS 56 Query: 229 QLLAFARKQRLEGRTINLNSLTEGFTDLVQRTLGGDIEVQTELASGLWNCRLDPTQMEVA 288 QLLAF R+Q LE R IN+ G DL++R+LG IEV+ + GLWN DP Q+E A Sbjct: 57 QLLAFGRRQALEPRVINIARFVTGMDDLLRRSLGEGIEVEVITSGGLWNTYADPNQVENA 116 Query: 289 LLNVLINARDAMSGKGTVKIHTSNEDLSSEDRAIQLGVKPGLYVCIAVTDNGPGIPADIL 348 LLN+ INARDAM G G + I N L + V G YV +AVTD G G+ +IL Sbjct: 117 LLNLAINARDAMEGHGKLTIEVGNAVLDRDYARKHSEVSAGQYVMLAVTDTGSGMSPEIL 176 Query: 349 PRVMDPFFTTKDEGKGTGLGLSMVYGFVKQSGGSVRIVSSAERGTTVSIYFP 400 +V +PFF+TK EGKGTGLGLSMVYGF KQS G V I S +GTTV +Y P Sbjct: 177 EKVFEPFFSTKPEGKGTGLGLSMVYGFAKQSSGHVNIYSEVGQGTTVKMYLP 228 >mll2384_2 [T] COG0642 Signal transduction histidine kinase Mlo Mesorhizobium loti Length = 329 Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 113/269 (42%), Positives = 170/269 (63%), Gaps = 12/269 (4%) Query: 139 GELKYFFSSQLDISRRRDAEQALGQARKMEALGQLTGGIAHDFNNLLQVISGYLDIINLA 198 G + LD++ RR+ E L Q+++++A+G+LTGG+AHDFNNLL I L + L Sbjct: 58 GRRPEILGTLLDVTERRELEDQLLQSQRLDAIGKLTGGLAHDFNNLLAAI---LSGLGLL 114 Query: 199 LRSDTPDLGRVSRSADSIRKASGKAAMLTQQLLAFARKQRLEGRTINLNSLTEGFTDLVQ 258 R T D + + D R+++ + A L ++LAF+R+Q L+ ++L +L + LV Sbjct: 115 ERHATLD-DQARQVVDLTRRSAKQGAELVSRMLAFSRRQNLKPAAVHLATLGDTMNGLVA 173 Query: 259 RTLGGDIEVQTELASGLWNCRLDPTQMEVALLNVLINARDAMSGKGTVKIHTSNE--DLS 316 LGG I + ++ + +W +D Q+E+AL+N++ NARDAM GT+ +H N +++ Sbjct: 174 PVLGGLIRFEWKIDNSVWLAHVDVGQLELALMNLVFNARDAMPSGGTITVHAQNRVIEIA 233 Query: 317 SEDRAIQLGVKPGLYVCIAVTDNGPGIPADILPRVMDPFFTTKDEGKGTGLGLSMVYGFV 376 SED + PG YV + V D G GIP DIL +V++PFFTTK GKGTGLGLS VYGF+ Sbjct: 234 SED------LPPGDYVVVTVKDTGAGIPQDILAKVVEPFFTTKPVGKGTGLGLSTVYGFI 287 Query: 377 KQSGGSVRIVSSAERGTTVSIYFPATQDQ 405 KQSGGS+RI S+ RGT + ++ P + +Q Sbjct: 288 KQSGGSLRIDSAVGRGTAMELWLPRSIEQ 316 >CC3225_2 [T] COG0642 Signal transduction histidine kinase Ccr Caulobacter vibrioides Length = 257 Score = 208 bits (529), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 120/235 (51%), Positives = 151/235 (64%), Gaps = 3/235 (1%) Query: 166 KMEALGQLTGGIAHDFNNLLQVISGYLDIINLALRSDTPDLGRVSRSADSIRKASGKAAM 225 KMEA+GQLTGG+AHDFNNLL ISG ++I L G V R + + A+ +AA Sbjct: 1 KMEAVGQLTGGLAHDFNNLLAGISGSFEMIGARLAQGRA--GEVERYLTAGQGAARRAAA 58 Query: 226 LTQQLLAFARKQRLEGRTINLNSLTEGFTDLVQRTLGGDIEVQTELASGLWNCRLDPTQM 285 LT +LLAF+R+Q L R + +N L F +LV+RT+G I+V+ A+GLW +D Q+ Sbjct: 59 LTHRLLAFSRRQTLAPRPMVVNRLLPDFVELVRRTVGPSIKVENVAATGLWPTLVDANQL 118 Query: 286 EVALLNVLINARDAMSGKGTVKIHTSNEDLSSEDRAIQLGVKPGLYVCIAVTDNGPGIPA 345 E ALLN+ INARDAM G + I TSN L A + G+ PG YV ++V+D G GI Sbjct: 119 ENALLNLCINARDAMPDGGKIMIETSNRWLDGPA-AREHGLDPGQYVSVSVSDTGTGIDK 177 Query: 346 DILPRVMDPFFTTKDEGKGTGLGLSMVYGFVKQSGGSVRIVSSAERGTTVSIYFP 400 L RV DPFFTTK G+GTGLGLSMVYGF +QS G VRI S GTTV +Y P Sbjct: 178 ATLERVFDPFFTTKPIGQGTGLGLSMVYGFARQSNGHVRIYSEVGHGTTVCLYLP 232 >ECs5074_1 [T] COG0642 Signal transduction histidine kinase Ecs Escherichia coli O157:H7 Length = 640 Score = 199 bits (506), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 108/258 (41%), Positives = 171/258 (66%), Gaps = 17/258 (6%) Query: 146 SSQLDISR--RRDAEQALGQARKMEALGQLTGGIAHDFNNLLQVISGYLDIINLALRSDT 203 ++Q++I++ R+ E+AL ++K++A+GQLTGG+AHDFNNLL VI G L+++N D+ Sbjct: 375 TTQMEIAQTERQGLEEALLHSQKLKAVGQLTGGLAHDFNNLLAVIIGSLELVN----PDS 430 Query: 204 PDLGRVSRSADSIRKASGKAAMLTQQLLAFARKQRLEGRTINLNSLTEGFTDLVQRTLGG 263 PD R+ R+ +A+ + A+LTQ+LLAF+RKQ L + + L +L E ++L++ +L Sbjct: 431 PDAPRIQRAL----QAAERGALLTQRLLAFSRKQSLHPQAVELKTLLEELSELMRHSLPA 486 Query: 264 DIEVQTELASGLWNCRLDPTQMEVALLNVLINARDAMSGK-GTVKIHTSNEDLSSEDRAI 322 + ++ E S W +D +Q+E A++N+++NARDAM G+ G +KI T N+ ++ Sbjct: 487 TLALEIEAQSPAWPAWIDISQLENAIINLVMNARDAMEGQTGIIKIRTWNQRVTRSS--- 543 Query: 323 QLGVKPGLYVCIAVTDNGPGIPADILPRVMDPFFTTKDEGKGTGLGLSMVYGFVKQSGGS 382 G + + V + V D+G G+ + +V +PFFTTK G G+GLGLSMVYGFV+QSGG Sbjct: 544 --GQRQDM-VALEVIDHGCGMSQAVKSQVFEPFFTTKQTGSGSGLGLSMVYGFVRQSGGR 600 Query: 383 VRIVSSAERGTTVSIYFP 400 V I S+ +GTTV + P Sbjct: 601 VEIESAPGQGTTVRLQLP 618