BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0057.p         (74 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

bioB [H] COG0502 Biotin synthase and related enzymes Eco Escheri...    94   5e-20
ECs0853 [H] COG0502 Biotin synthase and related enzymes Ecs Esch...    94   5e-20
YPO1151 [H] COG0502 Biotin synthase and related enzymes Ype Yers...    94   5e-20
ZbioB [H] COG0502 Biotin synthase and related enzymes EcZ Escher...    94   6e-20
STM0794 [H] COG0502 Biotin synthase and related enzymes Sty Salm...    93   1e-19

>bioB [H] COG0502 Biotin synthase and related enzymes Eco Escherichia
           coli K12
          Length = 346

 Score = 94.4 bits (233), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 52/73 (71%)

Query: 1   VRTVAVARIALPHAVIRLSAGRESMSEATQALCFAAGANSIFLGAKLLTTANAPVSADLD 60
           +RT+AVARI +P + +RLSAGRE M+E TQA+CF AGANSIF G KLLTT N     DL 
Sbjct: 244 IRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQ 303

Query: 61  LLQRLGLQAAAAA 73
           L ++LGL     A
Sbjct: 304 LFRKLGLNPQQTA 316


>ECs0853 [H] COG0502 Biotin synthase and related enzymes Ecs Escherichia
           coli O157:H7
          Length = 346

 Score = 94.4 bits (233), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 52/73 (71%)

Query: 1   VRTVAVARIALPHAVIRLSAGRESMSEATQALCFAAGANSIFLGAKLLTTANAPVSADLD 60
           +RT+AVARI +P + +RLSAGRE M+E TQA+CF AGANSIF G KLLTT N     DL 
Sbjct: 244 IRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQ 303

Query: 61  LLQRLGLQAAAAA 73
           L ++LGL     A
Sbjct: 304 LFRKLGLNPQQTA 316


>YPO1151 [H] COG0502 Biotin synthase and related enzymes Ype Yersinia pestis
          Length = 345

 Score = 94.4 bits (233), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 52/73 (71%)

Query: 1   VRTVAVARIALPHAVIRLSAGRESMSEATQALCFAAGANSIFLGAKLLTTANAPVSADLD 60
           +RT+AVARI +P + +RLSAGRE M+E TQA+CF AGANSIF G KLLTT N     DL 
Sbjct: 244 IRTIAVARIMMPSSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPDEDKDLQ 303

Query: 61  LLQRLGLQAAAAA 73
           L ++LGL     A
Sbjct: 304 LFRKLGLNPQQTA 316


>ZbioB [H] COG0502 Biotin synthase and related enzymes EcZ Escherichia
           coli O157:H7 EDL933
          Length = 346

 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 52/73 (71%)

Query: 1   VRTVAVARIALPHAVIRLSAGRESMSEATQALCFAAGANSIFLGAKLLTTANAPVSADLD 60
           +RT+AVARI +P + +RLSAGRE M+E TQA+CF AGANSIF G KLLTT N     DL 
Sbjct: 244 IRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQ 303

Query: 61  LLQRLGLQAAAAA 73
           L ++LGL     A
Sbjct: 304 LFRKLGLNPQQTA 316


>STM0794 [H] COG0502 Biotin synthase and related enzymes Sty Salmonella
           typhimurium LT2
          Length = 346

 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 51/67 (76%)

Query: 1   VRTVAVARIALPHAVIRLSAGRESMSEATQALCFAAGANSIFLGAKLLTTANAPVSADLD 60
           +RT+AVARI +P + +RLSAGRE M+E TQA+CF AGANSIF G KLLTT N     DL 
Sbjct: 244 IRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPAEDKDLQ 303

Query: 61  LLQRLGL 67
           L ++LGL
Sbjct: 304 LFRKLGL 310