BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0032.p (369 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp1040 [P] COG3696 Putative silver efflux pump Rso Ralstonia so... 585 e-167 CC2390 Non COG 194 2e-49 RSp0493 [P] COG3696 Putative silver efflux pump Rso Ralstonia so... 187 3e-47 CC2724 Non COG 182 1e-45 RSp0530 [P] COG3696 Putative silver efflux pump Rso Ralstonia so... 177 3e-44 >RSp1040 [P] COG3696 Putative silver efflux pump Rso Ralstonia solanacearum Length = 1038 Score = 585 bits (1509), Expect = e-167, Method: Compositional matrix adjust. Identities = 281/378 (74%), Positives = 322/378 (85%), Gaps = 9/378 (2%) Query: 1 VLAWLEPRYRQVLGRLVGKSRFVLAATALTLAAIGVLGATIGRDFLPYLDEGSIWLQVQL 60 VL WL PRY+ +L RLVGKSR V+ TLA + +LG +IGRDFLPYLDEGSIWLQV L Sbjct: 502 VLHWLVPRYQALLSRLVGKSRTVIGLAVATLAGVVILGGSIGRDFLPYLDEGSIWLQVTL 561 Query: 61 PPGVSLDKASELADRLRAATREFPEVEHIVTQVGRNDDGTDPFTPSHIEAAVTLHPYSEW 120 PPG+SLDKAS +AD LRAAT EFPE+EHIVTQVGRNDDGTDPFTPSHIE+AVTLHPY EW Sbjct: 562 PPGLSLDKASRMADTLRAATLEFPEIEHIVTQVGRNDDGTDPFTPSHIESAVTLHPYDEW 621 Query: 121 ASGWTKQELIAHMAERYKKLAGIDVGFTQPMIDGVLDKLSGSHSDLAVKIYGNDFGEMRV 180 +G KQ+LIA MAER+++L GIDVGFTQPMIDGVLDKL+G+HSDL VK+YGNDFGE R Sbjct: 622 KTGRDKQQLIAKMAERFRQLPGIDVGFTQPMIDGVLDKLAGAHSDLVVKVYGNDFGETRQ 681 Query: 181 LATAVQGVLQDVPGAADVVIDQEPRLPQVRVNVDRAAAARLGINVADIMALIQTGIGGSP 240 LAT V+ +L+ VPGA DV+IDQEP LPQVR++VDRAAAARLGIN+AD+MALIQTGIGGSP Sbjct: 682 LATEVEHLLKTVPGAQDVIIDQEPPLPQVRIDVDRAAAARLGINIADVMALIQTGIGGSP 741 Query: 241 VTQVFIEERSYNVAAVFNGRARSTPEALGNLTLVAANGAHIALSQVAHISMEDGETTITR 300 VTQVF+EERSY+V A F G +RS PEA+GNL L AANGAHIAL+Q+A I +GETTITR Sbjct: 742 VTQVFVEERSYDVVARFAGASRSNPEAIGNLMLTAANGAHIALAQIAKIRFAEGETTITR 801 Query: 301 EMNRRHLTVRLNLRGRDLASFLDDAKARIAQQVQYDHGRYQVAWGGQFENQQ-------- 352 EMN+RHLTVRLNLRGRDLASFLD+AK RI Q+++YDH RYQ+AWGGQFENQQ Sbjct: 802 EMNKRHLTVRLNLRGRDLASFLDEAKRRIDQEIRYDHTRYQIAWGGQFENQQRAQARLAV 861 Query: 353 -LPMALALMFVLLFAXWR 369 LPM LALMFVLLFA ++ Sbjct: 862 ILPMVLALMFVLLFAEFK 879 >CC2390 Non COG Length = 1057 Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 122/365 (33%), Positives = 193/365 (52%), Gaps = 17/365 (4%) Query: 21 RFVLAATALTLAAIGVLGAT-IGRDFLPYLDEGSIWLQVQLPPGVSLDKASELADRLRAA 79 R A A+ L AI A+ +G +F+P LDEG I + PG SL +A + L A Sbjct: 551 RVAFVAGAVLLVAIAAFAASRMGSEFVPNLDEGDIAMHALRIPGTSLSQAIAMQTALEAK 610 Query: 80 TREFPEVEHIVTQVGRNDDGTDPFTPSHIEAAVTLHPYSEWASGWT-KQELIAHMAERYK 138 + PEV+ +V+++G + TDP PS + + L +W + +L+A + Sbjct: 611 VKTLPEVDRVVSKIGTAEVATDPMPPSVADTFIMLKDRKDWPDPRKPRAQLVAELEAVVA 670 Query: 139 KLAGIDVGFTQPMIDGVLDKLSGSHSDLAVKIYGNDFGEMRVLATAVQGVLQDVPGAADV 198 K+ G + FTQP+ + LSG +D+AVK++G+D ++ + + GV++ V GA DV Sbjct: 671 KVPGNNYEFTQPIQMRFNELLSGVRADVAVKVFGDDLDQLLAIGEQIGGVIEGVEGAQDV 730 Query: 199 VIDQEPRLPQVRVNVDRAAAARLGINVADIMALIQTGIGGSPVTQVFIEERSYNVAAVFN 258 ++Q LP +++ DRAA ARLG+NV D+ +++ T IGG+ QVF +R ++V Sbjct: 731 GVEQVTGLPVLQITPDRAALARLGLNVDDVQSVVATAIGGTVTGQVFEGDRRFDVVVRLP 790 Query: 259 GRARSTPEALGNLTLVAANG-----AHIALSQVAHISMEDGETTITREMNRRHLTVRLNL 313 R + +G L + + L VA I M G I+RE +R + V N+ Sbjct: 791 EAVRGRIDDIGRLRIPLPGAIDQPRGFVPLQDVARIEMVIGPNQISREDGKRRIVVTANV 850 Query: 314 RGRDLASFLDDAKARIAQQVQYDHGRYQVAWGGQFEN-----QQL----PMALALMFVLL 364 RGRDL SF+ + + ++ QV+ G Y + +GG FE Q+L P AL L+F LL Sbjct: 851 RGRDLGSFITEVQRKVGAQVELPTG-YWITYGGAFEQLISAAQRLQLVVPAALLLIFGLL 909 Query: 365 FAXWR 369 +A +R Sbjct: 910 YALFR 914 >RSp0493 [P] COG3696 Putative silver efflux pump Rso Ralstonia solanacearum Length = 1064 Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 121/384 (31%), Positives = 196/384 (51%), Gaps = 17/384 (4%) Query: 1 VLAWLEPRYRQVLGRLVGKSRFVLAATALTLAAIGVLGATIGRDFLPYLDEGSIWLQVQL 60 ++ W Y +L R + VL A+ ++ V +G +F+P L+EG +Q Sbjct: 518 LMGWARRMYAPLLERALAAPAVVLTFAAVAVSVSLVAALRLGAEFVPNLNEGDFSIQAMR 577 Query: 61 PPGVSLDKASELADRL-RAATREFPEVEHIVTQVGRNDDGTDPFTPSHIEAAVTLHPYSE 119 PG L ++ E+ ++ R +FPE+ + + G + TD PS + + L P + Sbjct: 578 VPGTGLAQSLEMQMQIERTLKAKFPEIARVFARTGTAEIATDVMPPSISDGYIMLRPEQD 637 Query: 120 WASG-----WTKQELIAHMAERYKKLAGIDVGFTQPMIDGVLDKLSGSHSDLAVKIYGND 174 W +G + +L+A + + L G F+QP+ + +SG SD+AVK++G+D Sbjct: 638 WPAGPDGTRRDRDQLLADIRATVETLPGNAYEFSQPIQLRFNELISGVRSDVAVKLFGDD 697 Query: 175 FGEMRVLATAVQGVLQDVPGAADVVIDQEPRLPQVRVNVDRAAAARLGINVADIMALIQT 234 + A A+ L + GAA+V I+Q LP + +++DR AAR G+ + I + Sbjct: 698 MAVLEKQAQAIAAQLGRLAGAAEVKIEQTGGLPFLNIDIDREKAARYGLAIGAIQDTVSA 757 Query: 235 GIGGSPVTQVFIEERSYNVAAVFNGRARSTPEALGNLTLVAANG-AHIALSQVAHISMED 293 IGG VF +R + + ARS P ALG L L NG ++ LS+VA + Sbjct: 758 AIGGKGAGTVFQGDRRFGIVVRLPEAARSDPAALGRLPLALPNGQGYVPLSEVATLHEVT 817 Query: 294 GETTITREMNRRHLTVRLNLRGRDLASFLDDAKARIAQQVQYDHGRYQVAWGGQFENQQ- 352 G ++RE +R + V N+RGRD+ASF+ +A+ + Q++ G Y +AWGGQFE Q Sbjct: 818 GPNQVSREDGKRRIVVSANVRGRDIASFVQEAQRALDAQIRLPAG-YWMAWGGQFEQLQS 876 Query: 353 --------LPMALALMFVLLFAXW 368 +P+ALAL+F LLF + Sbjct: 877 ATERLQVVVPLALALVFTLLFMMF 900 >CC2724 Non COG Length = 1080 Score = 182 bits (462), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 112/375 (29%), Positives = 193/375 (51%), Gaps = 13/375 (3%) Query: 4 WLEPRYRQVLGRLVGKSRFVLAATALTLAAIGVLGATIGRDFLPYLDEGSIWLQVQLPPG 63 W + Y +L + V + V+AA + +GR+F P LDE + +Q P Sbjct: 545 WAKVGYAPLLRKAVARPWPVIAAATGLFVVAMITFTFLGREFTPQLDEKDLAVQALRIPS 604 Query: 64 VSLDKASELADRLRAATREFPEVEHIVTQVGRNDDGTDPFTPSHIEAAVTLHPYSEWA-S 122 SL+++ + ++ FPEVE + ++ G + +DP P+ ++ + L EW S Sbjct: 605 TSLEQSLRMQRQIERTIAAFPEVEFVYSKTGTAEVASDPMPPNASDSFIILKAQDEWPDS 664 Query: 123 GWTKQELIAHMAERYKKLAGIDVGFTQPMIDGVLDKLSGSHSDLAVKIYGNDFGEMRVLA 182 +K +L+ M + + L G F+QP+ + ++G D+A+K+YG+D M A Sbjct: 665 KQSKAQLVDRMERKLEGLTGNVYEFSQPIQMRFNELIAGVRGDVAIKVYGDDLAAMTASA 724 Query: 183 TAVQGVLQDVPGAADVVIDQEPRLPQVRVNVDRAAAARLGINVADIMALIQTGIGGSPVT 242 + GVL+ V GAADV ++Q P + V++DR A RLG+ V ++ + +GG Sbjct: 725 DQIAGVLRGVRGAADVKVEQTSGFPTLDVSLDRDAIGRLGLTVEEVADTLAVAMGGRASG 784 Query: 243 QVFIEERSYNVAAVFNGRARSTPEALGNLTLVAANGA------HIALSQVAHISMEDGET 296 VF +R + V R+ +A+G L ++ +GA + L VA S +G Sbjct: 785 LVFQGDRRFEVVVRLPEATRNDLDAIGALPVMLPHGASAGPRLSVPLRDVARFSFSEGLN 844 Query: 297 TITREMNRRHLTVRLNLRGRDLASFLDDAKARIAQQVQYDHGRYQVAWGGQFEN-----Q 351 ++RE +R + V+ N+RG DL SF+ +A+A+++ Q++ G + V W GQFEN Sbjct: 845 QVSRENGKRRVVVQANVRGNDLGSFVSEAQAKVSAQIELPAGSW-VEWSGQFENLKAAQS 903 Query: 352 QLPMALALMFVLLFA 366 +L + + L F+L+FA Sbjct: 904 RLSLVVPLCFLLIFA 918 >RSp0530 [P] COG3696 Putative silver efflux pump Rso Ralstonia solanacearum Length = 1049 Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 104/321 (32%), Positives = 174/321 (54%), Gaps = 1/321 (0%) Query: 35 GVLGATIGRDFLPYLDEGSIWLQVQLPPGVSLDKASELADRLRAATREFPEVEHIVTQVG 94 G L +G F+P + EGSI + P +SL+++ + + P V V+ VG Sbjct: 566 GALMPFLGTAFIPEMKEGSIVPGINRAPNISLEESVRMEMEAMRLVMQVPGVRSAVSGVG 625 Query: 95 RNDDGTDPFTPSHIEAAVTLHPYSEWASGWTKQELIAHMAERYKKLAGIDVGFTQPMIDG 154 R + DP + V+L P +W GWT+ ++ M + L G+ + QP+ D Sbjct: 626 RGESPADPQGQNESTPIVSLKPRDQWPKGWTQDDIAEAMRRALQALPGVQIVMAQPISDR 685 Query: 155 VLDKLSGSHSDLAVKIYGNDFGEMRVLATAVQGVLQDVPGAADVVIDQEPRLPQVRVNVD 214 V + ++G SD+A+K++G+D +R A A+ V Q + GA D+ +++ +++ +D Sbjct: 686 VDEMVTGVRSDVAIKVFGDDLAVLREKAEAIARVAQGIQGAQDMRVERITGQQYLQIAID 745 Query: 215 RAAAARLGINVADIMALIQTGIGGSPVTQVFIEERSYNVAAVFNGRARSTPEALGNLTLV 274 R A AR G+N +D+ +I+T IGG T++F ER + R + EA+ NL + Sbjct: 746 RQAIARHGLNASDVHNVIETAIGGKEATEIFEGERRFGAVVRLPEAYRGSVEAIRNLIVA 805 Query: 275 AANGAHIALSQVAHISMEDGETTITREMNRRHLTVRLNLRGRDLASFLDDAKARIAQQVQ 334 A NGA + L +A I + DG I+RE+ +R + V +N+R RDL F+ + +A +AQ+V+ Sbjct: 806 APNGAQVPLESLARIEVTDGPAQISRELGKRRVVVGVNVRDRDLGGFVAELQAAVAQKVK 865 Query: 335 YDHGRYQVAWGGQFENQQLPM 355 G Y + WGGQF+N + M Sbjct: 866 LPEG-YYLEWGGQFQNMERAM 885