BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0019.p (539 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl2824 [E] COG0747 ABC-type dipeptide transport system, peripla... 537 e-152 SMa1860 [E] COG0747 ABC-type dipeptide transport system, peripla... 522 e-148 mll7034 [E] COG0747 ABC-type dipeptide transport system, peripla... 519 e-147 mlr9210 [E] COG0747 ABC-type dipeptide transport system, peripla... 346 7e-95 SMc01642 [E] COG0747 ABC-type dipeptide transport system, peripl... 333 6e-91 >AGl2824 [E] COG0747 ABC-type dipeptide transport system, periplasmic component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 563 Score = 537 bits (1383), Expect = e-152, Method: Compositional matrix adjust. Identities = 260/526 (49%), Positives = 356/526 (67%), Gaps = 1/526 (0%) Query: 15 SDTAGLMDCLKRGASRRDILKMLLAGGMQATLAGGLATSAASAYAQTPRRGGKLRVGGDT 74 SD A + ++RGA+RR++L M+LAGG+ + + A+ A A TP GG L+ G + Sbjct: 38 SDDAAVEQAIRRGATRRELLHMMLAGGVALSAGSAILGRASKAVAATPVSGGSLKAAGWS 97 Query: 75 ASVSDTLDPAKQSNKTDYSRGTMLYNGLTSLDASLTPQPALAESFSSKDARVWVFKLRRG 134 +S +DTLDPAK S TDY R LY+ LT LD S TPQ LAES +KDA+ W KLR G Sbjct: 98 SSTADTLDPAKASLSTDYVRCCALYSRLTFLDVSGTPQMELAESIETKDAKTWTVKLRSG 157 Query: 135 VSFHDGKPLAPADVVFSLMRHKDPATASKAKTLADQIESVKETGPNEVTVTLTAPNADLP 194 V+FHDGK L DVV+SL RH DPA SK +A Q+ K N V +TL PNADLP Sbjct: 158 VTFHDGKSLTADDVVYSLKRHLDPAVGSKVAKIAAQMTGFKAVDKNTVEITLANPNADLP 217 Query: 195 VIVGTFHFHIVKAGTTDFSAGIGTGPYKLKEFTPGIRSVVVRNENYWKPGKPYLDEIEFV 254 I+ HF IV G TDFS G GTG +KL++F PG+RSV+ +N NYWK G P+LD EF+ Sbjct: 218 SILALHHFMIVADGATDFSKGNGTGAFKLEKFEPGVRSVMAKNANYWKSGGPHLDSFEFM 277 Query: 255 GIGDENARVNALLSGGLDLVANLNPRSIERVKGSAGFAVLETPSGAYTDLILRKDVGPGS 314 I D+NARVNALLSG + L A +NPR++ + G + +T SG YT+L +R D PG+ Sbjct: 278 AISDDNARVNALLSGDIQLAAAINPRALRLLDKQDGVVMSKTTSGNYTNLNIRLDQAPGN 337 Query: 315 NPDFVLAMKYLMDREVMRKNIARGHAVLGNDQPIDPTNPFYLAGLPQRQMDLDKAKYHLQ 374 DFV MK L++RE + K RG +GNDQP+ P +P+Y L + DLDKAK+H + Sbjct: 338 KTDFVAGMKSLINREQIIKAALRGLGEVGNDQPVPPMSPYYNPDLKPKAFDLDKAKFHFE 397 Query: 375 KSGVTGK-IPLVCSAAAMYSVDIATVLQQTAQRVGLDLELKRMPPEGYWSNQWLSNPVGF 433 K+GV G+ IP++ S AA S+D+A ++Q +A ++G+ L+++R+P +GYWSN WL P+ F Sbjct: 398 KAGVIGQSIPVIASDAAGSSIDMAMIMQASAAQIGVKLDVQRVPSDGYWSNYWLKAPIHF 457 Query: 434 GNVNPRPSADVLLTQFFQSQAAWNESRFKSEKFDQLLTSARAEIDPGKRKQMYGDMQTII 493 GN+NPRP+ D+L + + S A WNES++KS KFD+++ AR +D KRKQ+Y +M+ +I Sbjct: 458 GNINPRPTPDILFSLLYASDAPWNESQYKSPKFDKMMLEARGLLDLEKRKQIYFEMERMI 517 Query: 494 HEEAGIGIPMFLALLDGYSSKVKGLSPIPLGGMMGYSFAEHVWLDS 539 +EAG IP +++ +D SSK+KGL PLGGMMGY+FAE+VWL++ Sbjct: 518 ADEAGTIIPAYISNVDAISSKLKGLEANPLGGMMGYAFAEYVWLEA 563 >SMa1860 [E] COG0747 ABC-type dipeptide transport system, periplasmic component Sme Sinorhizobium meliloti Length = 536 Score = 522 bits (1345), Expect = e-148, Method: Compositional matrix adjust. Identities = 257/535 (48%), Positives = 358/535 (66%), Gaps = 3/535 (0%) Query: 7 NKLDLLSASDTAGLMDCLKRGASRRDILKMLLAGGMQATLAGGLATSAASAYAQTPRRGG 66 +K+ + SD A + ++RGA+RR++L+M+LAGG + + A +A A TP GG Sbjct: 3 DKITNWTRSDDAMVETAIRRGATRRELLQMMLAGGAALSAGSLVLGRAGNAVAATPVSGG 62 Query: 67 KLRVGGDTASVSDTLDPAKQSNKTDYSRGTMLYNGLTSLDASLTPQPALAESFSSKDARV 126 LR G +AS +DTLDPAK S TDY R YN L LD TPQ LAE+ +KDA+ Sbjct: 63 TLRAAGWSASTADTLDPAKASLSTDYVRCCSFYNRLAFLDKGGTPQMELAEAIETKDAKT 122 Query: 127 WVFKLRRGVSFHDGKPLAPADVVFSLMRHKDPATASKAKTLADQIESVKETGPNEVTVTL 186 W KLR+GV+FHDGKPLA DV+FSL RH DP+ SK +A Q+ K V +TL Sbjct: 123 WTVKLRKGVTFHDGKPLAADDVIFSLKRHLDPSVGSKVAKIAAQMTGFKAVDKQTVEITL 182 Query: 187 TAPNADLPVIVGTFHFHIVKAGTTDFSAGIGTGPYKLKEFTPGIRSVVVRNENYWKPGKP 246 +PNADLP I+ HF IV GTTDFS G GTG + + F PG+RSV ++N+NYWK G P Sbjct: 183 ASPNADLPTILSMHHFMIVADGTTDFSKGNGTGAFVREVFEPGVRSVGIKNKNYWKSG-P 241 Query: 247 YLDEIEFVGIGDENARVNALLSGGLDLVANLNPRSIERVKGS-AGFAVLETPSGAYTDLI 305 +D E+ I D+++RVNALLSG + L A +NPRS+ V+ AGF + +T SG YT+L Sbjct: 242 NVDSFEYFAISDDSSRVNALLSGDIHLAATINPRSMRLVESQGAGFVLSKTTSGNYTNLN 301 Query: 306 LRKDVGPGSNPDFVLAMKYLMDREVMRKNIARGHAVLGNDQPIDPTNPFYLAGLPQRQMD 365 +R D+ PGS DFV MKYL++RE + K+ RG +GNDQP+ P N ++ L R D Sbjct: 302 MRLDMEPGSKRDFVEGMKYLVNREQIVKSALRGLGEVGNDQPVSPANFYHNPDLKPRAFD 361 Query: 366 LDKAKYHLQKSGVTGK-IPLVCSAAAMYSVDIATVLQQTAQRVGLDLELKRMPPEGYWSN 424 +KAK+H +K+G+ G+ IP+V S AA +VD+A ++Q +A +GL L+++R+P +GYW N Sbjct: 362 PEKAKFHFEKAGMLGQSIPVVASDAANSAVDMAMIIQASAAEIGLKLDVQRVPADGYWDN 421 Query: 425 QWLSNPVGFGNVNPRPSADVLLTQFFQSQAAWNESRFKSEKFDQLLTSARAEIDPGKRKQ 484 WL PV FGN+NPRP+ D+L + + S+A WNES++KSEKFD++L AR +D +RK Sbjct: 422 YWLKAPVHFGNINPRPTPDILFSLLYSSEAPWNESQYKSEKFDKMLIEARGSLDQERRKA 481 Query: 485 MYGDMQTIIHEEAGIGIPMFLALLDGYSSKVKGLSPIPLGGMMGYSFAEHVWLDS 539 +Y +MQ ++ EAG IP +++ +D ++K+KGL PLGG MGY+FAE+VWL++ Sbjct: 482 IYNEMQVMVASEAGTIIPAYISNVDAITAKLKGLEANPLGGQMGYAFAEYVWLEA 536 >mll7034 [E] COG0747 ABC-type dipeptide transport system, periplasmic component Mlo Mesorhizobium loti Length = 505 Score = 519 bits (1336), Expect = e-147, Method: Compositional matrix adjust. Identities = 246/487 (50%), Positives = 331/487 (67%), Gaps = 1/487 (0%) Query: 54 AASAYAQTPRRGGKLRVGGDTASVSDTLDPAKQSNKTDYSRGTMLYNGLTSLDASLTPQP 113 A +A A TP GG + G ++S +DTLDPAK S TDY R LYN LT LD Q Sbjct: 19 ATNAVAATPVSGGTFKAAGWSSSTADTLDPAKASLSTDYVRCCSLYNRLTFLDKDGVTQM 78 Query: 114 ALAESFSSKDARVWVFKLRRGVSFHDGKPLAPADVVFSLMRHKDPATASKAKTLADQIES 173 LAESF SKDA+ W KLR+GV+FHDGK L DVV+SL RH D + SK +A Q+ Sbjct: 79 ELAESFDSKDAKTWTVKLRKGVTFHDGKDLTADDVVYSLKRHLDKSVGSKVAKIAAQMTG 138 Query: 174 VKETGPNEVTVTLTAPNADLPVIVGTFHFHIVKAGTTDFSAGIGTGPYKLKEFTPGIRSV 233 K + V +TL PNADLP I+ HF IV+ GTTDFS G GTG + L+ F PG+RSV Sbjct: 139 FKAVDKSTVEITLADPNADLPTILALHHFMIVQDGTTDFSKGNGTGAFVLQTFEPGVRSV 198 Query: 234 VVRNENYWKPGKPYLDEIEFVGIGDENARVNALLSGGLDLVANLNPRSIERVKGSAGFAV 293 V +N+NYWK GKPYLD EF+ I D++ARVNALLSG ++ A++NPR+++ + G GF + Sbjct: 199 VTKNKNYWKSGKPYLDSFEFIAISDDSARVNALLSGDINFAASINPRAMKLIGGQQGFEL 258 Query: 294 LETPSGAYTDLILRKDVGPGSNPDFVLAMKYLMDREVMRKNIARGHAVLGNDQPIDPTNP 353 +T SG YTDL +R D+ PG+ DFV MKYL++RE + K+ RG +GNDQP+ P N Sbjct: 259 SKTTSGNYTDLNIRLDMDPGNKADFVAGMKYLVNREQIVKSALRGLGEIGNDQPVSPANI 318 Query: 354 FYLAGLPQRQMDLDKAKYHLQKSGVTGK-IPLVCSAAAMYSVDIATVLQQTAQRVGLDLE 412 F+ + + D DKAK+H QKSG+ G+ IP++ S AA S+D+A ++Q +G+ L+ Sbjct: 319 FHNPDIKPKAFDPDKAKFHFQKSGLLGQSIPVIASDAATSSIDMAVIIQAAGADIGMKLD 378 Query: 413 LKRMPPEGYWSNQWLSNPVGFGNVNPRPSADVLLTQFFQSQAAWNESRFKSEKFDQLLTS 472 ++R+P +GYW N WL P+ FGN+NPRP+ D+L + + S A WNES++KSEKFD+LL Sbjct: 379 VQRVPSDGYWDNYWLKAPIHFGNINPRPTPDILFSLLYASNAPWNESQYKSEKFDKLLIE 438 Query: 473 ARAEIDPGKRKQMYGDMQTIIHEEAGIGIPMFLALLDGYSSKVKGLSPIPLGGMMGYSFA 532 AR +D KRK++Y MQ ++ EEAG IP +++ +D SSKVKGL PLGGMMGY+ A Sbjct: 439 ARGSLDQAKRKEIYNQMQVMVSEEAGTIIPAYISNVDALSSKVKGLEANPLGGMMGYAMA 498 Query: 533 EHVWLDS 539 E++WL++ Sbjct: 499 EYLWLEA 505 >mlr9210 [E] COG0747 ABC-type dipeptide transport system, periplasmic component Mlo Mesorhizobium loti Length = 527 Score = 346 bits (888), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 198/512 (38%), Positives = 287/512 (56%), Gaps = 7/512 (1%) Query: 29 SRRDILKMLLAGGMQATLAGGLATSAASAYAQTPRRGGKLRVGGDTASVSDTLDPAKQSN 88 SRRD L A G+ A A L ++AA A AQ P +GG L+ G + +DTLD A S Sbjct: 18 SRRDFLGRAAALGLSAPFANSLLSNAARA-AQ-PVKGGTLKAGLQGGAATDTLDTAHFST 75 Query: 89 KTDYSRGTMLYNGLTSLDASLTPQPALAESF-SSKDARVWVFKLRRGVSFHDGKPLAPAD 147 D + G L +D QPALAE + SSKDA+VW FK+R+GV FHDGK + PAD Sbjct: 76 SVDITFGRAWGEQLVQIDPKGGLQPALAEEWGSSKDAKVWTFKIRKGVHFHDGKEMTPAD 135 Query: 148 VVFSLMRHKDPATASKAKTLADQIESVKETGPNEVTVTLTAPNADLPVIVGTFHFHIVKA 207 V+ ++ RH D + S A + I+ + G N V TL PNADLP ++ +H I Sbjct: 136 VLATMERHSDKNSKSGALGIMQGIDKIAVDGQN-VVFTLKDPNADLPFLMDDYHLIIQPN 194 Query: 208 GTTDF-SAGIGTGPYKLKEFTPGIRSVVVRNENYWKPGKPYLDEIEFVGIGDENARVNAL 266 G D +AGIGTGPYK+ PG+R + YW+ + + D++E + I D AR++AL Sbjct: 195 GGKDNPAAGIGTGPYKVTTNEPGVRLGGEKFAGYWRDDRGFADQVEVIVINDATARMSAL 254 Query: 267 LSGGLDLVANLNPRSIERVKGSAGFAVLETPSGAYTDLILRKDVGPGSNPDFVLAMKYLM 326 SG + +V + P+ ++ +K G + + + R P N D LA+K+ + Sbjct: 255 QSGQVHIVNFVQPKLVDLIKRVPGMTIRNVSGRGHYVFVARCKTAPFDNNDLRLALKFAI 314 Query: 327 DREVMRKNIARGHAVLGNDQPIDPTNPFYLAGLPQRQMDLDKAKYHLQKSGVTGKIPLVC 386 DR+ M + RG+ +GND PI+ P + + QR+ D DKAK+H +KSG G + L Sbjct: 315 DRDEMLDKVLRGYGTVGNDFPINAAYPLFTE-VEQRKYDPDKAKFHYKKSGHDGPVLLRT 373 Query: 387 SAAAM-YSVDIATVLQQTAQRVGLDLELKRMPPEGYWSNQWLSNPVGFGNVNPRPSADVL 445 S A +VD A + QQ+A + G+ LE+KR P +GYWS W P RP+ D + Sbjct: 374 SDVAFPGAVDAAQLFQQSAAKAGIQLEIKREPGDGYWSEVWQKQPFCASYWGGRPTQDQM 433 Query: 446 LTQFFQSQAAWNESRFKSEKFDQLLTSARAEIDPGKRKQMYGDMQTIIHEEAGIGIPMFL 505 + + S+A WNES+F ++KFD++L ARAE+DP KRK++Y DM TI+++E G +PMF Sbjct: 434 YSVGYYSKADWNESQFVNDKFDKMLFQARAELDPEKRKKIYADMGTIVNQEGGTIVPMFN 493 Query: 506 ALLDGYSSKVKGLSPIPLGGMMGYSFAEHVWL 537 +D +KV+G P + GY W+ Sbjct: 494 QFIDATGAKVEGWIDDPNYELSGYYALSRCWI 525 >SMc01642 [E] COG0747 ABC-type dipeptide transport system, periplasmic component Sme Sinorhizobium meliloti Length = 538 Score = 333 bits (854), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 191/518 (36%), Positives = 291/518 (56%), Gaps = 13/518 (2%) Query: 29 SRRDILKMLLAGGMQATLAGGLATSAASAYAQTPRRGGKLRVGGDTASVSDTLDPAKQSN 88 +RR+ L A G+ A+ A L A+SA AQ P+RGG L++G + A+ +D+ DPAK + Sbjct: 27 NRREFLGRAAALGIAASTANTLF--ASSAAAQEPKRGGHLKLGLEGAAATDSRDPAKALS 84 Query: 89 KTDY----SRGTMLYNGLTSLDASLTPQPALAESFS-SKDARVWVFKLRRGVSFHDGKPL 143 + + + G ML + S + P PALAES+ S DA W F +R+GV FHDGK L Sbjct: 85 QFMFVVGRNWGDML---VESHPTTGEPVPALAESWEPSADAATWTFTIRKGVKFHDGKEL 141 Query: 144 APADVVFSLMRHKDPATASKAKTLADQIESVKETGPNEVTVTLTAPNADLPVIVGTFHFH 203 DV+ +L RH D + S A + I+ +K G +++ +TLT NADLP+++ +H Sbjct: 142 TIDDVIKTLQRHTDEKSESGALGVMKSIKEIKADG-DKLVLTLTEGNADLPLLLTDYHLI 200 Query: 204 IVKAGTTDF-SAGIGTGPYKLKEFTPGIRSVVVRNENYWKPGKPYLDEIEFVGIGDENAR 262 I G TD A IGTGPYK+ F PG+R+ RN + W+ + Y+D +E + + D AR Sbjct: 201 IQPNGGTDNPDAMIGTGPYKVASFEPGVRATFERNADDWRTDRGYVDSVELIAMNDATAR 260 Query: 263 VNALLSGGLDLVANLNPRSIERVKGSAGFAVLETPSGAYTDLILRKDVGPGSNPDFVLAM 322 + AL SG + + ++P+++ +K + +L T + I+ + P N D +A+ Sbjct: 261 IAALSSGQVHFINRVDPKTVNLLKKAPTVEILNTSGRGHYVFIMHCNTAPFDNNDLRMAL 320 Query: 323 KYLMDREVMRKNIARGHAVLGNDQPIDPTNPFYLAGLPQRQMDLDKAKYHLQKSGVTGKI 382 KY MDRE + + I G+ +GND PI+ T + G+ QR D DKA +H +KSG +G + Sbjct: 321 KYAMDRETLVQRILGGYGKVGNDFPINDTYALFPEGIEQRAYDPDKAAFHYKKSGHSGPV 380 Query: 383 PLVCSAAAM-YSVDIATVLQQTAQRVGLDLELKRMPPEGYWSNQWLSNPVGFGNVNPRPS 441 L S A +VD A + Q +A++ G+++E+KR P +GYWSN W P RP+ Sbjct: 381 LLRTSDVAFPGAVDAAVLYQASAKKAGIEIEVKREPGDGYWSNVWNVQPFSTSYWGGRPT 440 Query: 442 ADVLLTQFFQSQAAWNESRFKSEKFDQLLTSARAEIDPGKRKQMYGDMQTIIHEEAGIGI 501 D + + + S A WN++RFK FD++L AR+E+D KRK MY M ++ +E G+ + Sbjct: 441 QDQMYSTAYLSTADWNDTRFKRPDFDKILLEARSELDEAKRKDMYRTMAMMVRDEGGLIL 500 Query: 502 PMFLALLDGYSSKVKGLSPIPLGGMMGYSFAEHVWLDS 539 PMF ++ VKG M A VWLD+ Sbjct: 501 PMFNDFVNAAGKTVKGYVHDIGNDMSNGYVATRVWLDA 538