BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0001.p (261 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YPO0184 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 259 4e-69 mlr4519 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 249 6e-66 PA3936 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 243 4e-64 tauC [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transpor... 240 3e-63 SMb21528 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate tran... 238 8e-63 >YPO0184 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Ype Yersinia pestis Length = 284 Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 144/252 (57%), Positives = 182/252 (72%), Gaps = 1/252 (0%) Query: 11 TVRISVAAGIAILALWWLIAQTGWVPHLFLPTPSEVINVARSIWE-DGYANATLTEHVGA 69 T+ IS+A +++ALWW + + LFLP P +V++ +I G+ +ATL +H+ A Sbjct: 32 TLWISIATLASVVALWWAVTALQLIGPLFLPAPQQVLHQLWTIASPQGFMDATLWQHLAA 91 Query: 70 SLLRILTAGVIAVSLGIPVGLLMGLNRWVKGVLDTPIEFYWPLPPLAYLPLMIIWLGIGE 129 SL RI A + AV LG+P G+ MGLN V+GVLD IE Y P+PPLAYLPLM+IW GIGE Sbjct: 92 SLGRIFVALLAAVVLGVPTGIAMGLNSNVRGVLDPLIEIYRPVPPLAYLPLMVIWFGIGE 151 Query: 130 ASKITLLTLAMFAPVVLSAQAGVRSLPLERVNAALSLGATRWQLLVEIVLPSALPEILTG 189 SKI L+ LA+FAPV L+A AGVRS+ RV AA +LGA+RWQ+L +VLPSALPEILTG Sbjct: 152 TSKILLIYLAIFAPVTLAAVAGVRSVAHVRVRAARALGASRWQVLWFVVLPSALPEILTG 211 Query: 190 IRIALGVGWSTLVAAELIAANRGIGYMIMSASHFLATDAVFVGIALIAICAFVFSYGMRL 249 IRI LGVGWSTLVAAELIAA RG+G+M+ SA FLATD V GI++IAI AF +R Sbjct: 212 IRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEFLATDVVIAGISVIAIIAFGMELSLRA 271 Query: 250 LERALVPWKGKS 261 ++R L PW G+ Sbjct: 272 IQRRLTPWYGEQ 283 >mlr4519 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Mlo Mesorhizobium loti Length = 286 Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 134/255 (52%), Positives = 179/255 (70%), Gaps = 1/255 (0%) Query: 8 EGATVR-ISVAAGIAILALWWLIAQTGWVPHLFLPTPSEVINVARSIWEDGYANATLTEH 66 +G + R IS + +LA W L A+ V +FLP+P V N + DG+ +ATL +H Sbjct: 32 KGVSARMISAVTILVVLAAWALSARLQLVSPVFLPSPVAVWNKLIVVISDGFVDATLLQH 91 Query: 67 VGASLLRILTAGVIAVSLGIPVGLLMGLNRWVKGVLDTPIEFYWPLPPLAYLPLMIIWLG 126 ASL R+ A V A+ +G+PVGL +G++ +G+ D +EF P+PPLAYLPL+IIW G Sbjct: 92 TVASLGRVFAALVAALLIGVPVGLAIGISTVGRGIFDPLLEFLRPIPPLAYLPLVIIWFG 151 Query: 127 IGEASKITLLTLAMFAPVVLSAQAGVRSLPLERVNAALSLGATRWQLLVEIVLPSALPEI 186 IGE SKI ++ +AM APV LS +GVR + ER+NAA SLGAT+ Q++ ++LPSALP I Sbjct: 152 IGEPSKILVIAIAMLAPVALSTASGVRGVSQERINAARSLGATKRQVVRHVILPSALPSI 211 Query: 187 LTGIRIALGVGWSTLVAAELIAANRGIGYMIMSASHFLATDAVFVGIALIAICAFVFSYG 246 LTG+RIALG GWSTLVAAEL+AA RG+G+MI SA+ FL TD V +GI +IA AFV + Sbjct: 212 LTGLRIALGAGWSTLVAAELVAATRGLGFMIQSAAQFLVTDVVIMGILVIAAIAFVLEFT 271 Query: 247 MRLLERALVPWKGKS 261 +R +ERALVPW G+ Sbjct: 272 IRRIERALVPWAGRE 286 >PA3936 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Pae Pseudomonas aeruginosa Length = 272 Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 127/225 (56%), Positives = 165/225 (73%) Query: 33 GWVPHLFLPTPSEVINVARSIWEDGYANATLTEHVGASLLRILTAGVIAVSLGIPVGLLM 92 GWV LFLP P ++ + +W++GY +A+L +HVG SLLR+L A AV IP+G+LM Sbjct: 47 GWVDVLFLPAPEQLFEALQRLWQEGYLDASLLQHVGTSLLRVLLALGAAVLTAIPLGVLM 106 Query: 93 GLNRWVKGVLDTPIEFYWPLPPLAYLPLMIIWLGIGEASKITLLTLAMFAPVVLSAQAGV 152 GLN LD +EFY P+PPLAYLPL++IW GIGE SK+ L+ LA+FAP++++ AGV Sbjct: 107 GLNPLAGAALDPLVEFYRPIPPLAYLPLIVIWFGIGELSKVLLIYLALFAPLLIATAAGV 166 Query: 153 RSLPLERVNAALSLGATRWQLLVEIVLPSALPEILTGIRIALGVGWSTLVAAELIAANRG 212 R + RV A LGA+RWQ++ ++LPSALPE+LTG+RIALGVGWSTLVAAELIAANRG Sbjct: 167 RRVDRSRVQAVRCLGASRWQVVRYVILPSALPEVLTGLRIALGVGWSTLVAAELIAANRG 226 Query: 213 IGYMIMSASHFLATDAVFVGIALIAICAFVFSYGMRLLERALVPW 257 +G+M+ SA+ FLATD V VGI LIA A F G+R ++R W Sbjct: 227 LGFMVQSAAQFLATDVVVVGILLIAAIALAFELGLRWVQRRFAAW 271 >tauC [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Eco Escherichia coli K12 Length = 275 Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 139/250 (55%), Positives = 178/250 (71%), Gaps = 1/250 (0%) Query: 12 VRISVAAGIAILALWWLIAQTGWVPHLFLPTPSEVINVARSI-WEDGYANATLTEHVGAS 70 V +S+ +L +WW +A + LFLP P +V+ +I G+ +ATL +H+ AS Sbjct: 24 VTLSIGTLAVLLTVWWTVATLQLISPLFLPPPQQVLEKLLTIAGPQGFMDATLWQHLAAS 83 Query: 71 LLRILTAGVIAVSLGIPVGLLMGLNRWVKGVLDTPIEFYWPLPPLAYLPLMIIWLGIGEA 130 L RI+ A AV GIPVG+ MGL+ V+G+LD IE Y P+PPLAYLPLM+IW GIGE Sbjct: 84 LTRIMLALFAAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIGET 143 Query: 131 SKITLLTLAMFAPVVLSAQAGVRSLPLERVNAALSLGATRWQLLVEIVLPSALPEILTGI 190 SKI L+ LA+FAPV +SA AGV+S+ R+ AA SLGA+R Q+L ++LP ALPEILTG+ Sbjct: 144 SKILLIYLAIFAPVAMSALAGVKSVQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGL 203 Query: 191 RIALGVGWSTLVAAELIAANRGIGYMIMSASHFLATDAVFVGIALIAICAFVFSYGMRLL 250 RI LGVGWSTLVAAELIAA RG+G+M+ SA FLATD V GIA+IAI AF+ G+R L Sbjct: 204 RIGLGVGWSTLVAAELIAATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRAL 263 Query: 251 ERALVPWKGK 260 +R L PW G+ Sbjct: 264 QRRLTPWHGE 273 >SMb21528 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Sme Sinorhizobium meliloti Length = 275 Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 130/254 (51%), Positives = 192/254 (75%) Query: 7 GEGATVRISVAAGIAILALWWLIAQTGWVPHLFLPTPSEVINVARSIWEDGYANATLTEH 66 G+G + IS+ +A +ALW L+ + GW+ LFLP+P V + +G +N+TL +H Sbjct: 21 GDGMSGHISLLTALAFIALWLLVTEMGWIKPLFLPSPLAVWDKFVIALTEGVSNSTLAQH 80 Query: 67 VGASLLRILTAGVIAVSLGIPVGLLMGLNRWVKGVLDTPIEFYWPLPPLAYLPLMIIWLG 126 ASL R+L A ++A+ +PVG+LMG+NR V+G+ D IEFY PLPPLAYLPL+IIWLG Sbjct: 81 TLASLGRVLGAFLLALVTAVPVGILMGVNRVVRGLFDPIIEFYRPLPPLAYLPLIIIWLG 140 Query: 127 IGEASKITLLTLAMFAPVVLSAQAGVRSLPLERVNAALSLGATRWQLLVEIVLPSALPEI 186 IGE K+ L+ LA+FAP+ ++A+AGVRS+ E+++AA ++GATR Q++ ++L +ALPEI Sbjct: 141 IGEFPKVFLIYLAIFAPMAIAARAGVRSVSTEQIHAAYAMGATRAQVIGHVILKAALPEI 200 Query: 187 LTGIRIALGVGWSTLVAAELIAANRGIGYMIMSASHFLATDAVFVGIALIAICAFVFSYG 246 TG+RI +GVGW+TLVAAE++AA+RG+G+M+++A+ +LA+D V +GI +I + AF F Sbjct: 201 FTGMRIGIGVGWTTLVAAEMVAAHRGLGFMVLNAAEYLASDTVIMGIVVIGVFAFAFDLM 260 Query: 247 MRLLERALVPWKGK 260 +R LE+AL+PWKGK Sbjct: 261 IRYLEKALIPWKGK 274