BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0033.0082.p         (94 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGc2571 [E] COG1126 ABC-type polar amino acid transport system, ...    82   4e-16
CAC0879 [E] COG1126 ABC-type polar amino acid transport system, ...    81   6e-16
AGl381 [E] COG1126 ABC-type polar amino acid transport system, A...    78   6e-15
SMa0508 [E] COG1126 ABC-type polar amino acid transport system, ...    78   6e-15
AGc2580 [E] COG1126 ABC-type polar amino acid transport system, ...    77   8e-15

>AGc2571 [E] COG1126 ABC-type polar amino acid transport system, ATPase
          component Atu Agrobacterium tumefaciens strain C58
          (Cereon)
          Length = 244

 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 53/67 (79%)

Query: 26 IVRLDQVYKSFGDNQVLKGVSFEVARGEMIAIIGASGSGKSTALRCIDRLETIDSGSIEV 85
          ++ + +V KS+G N+VLKG++ +V  GE+IAIIG SGSGKST LRCI+ LETI +GSI V
Sbjct: 3  LIEITEVRKSYGSNEVLKGINLDVEPGEVIAIIGKSGSGKSTLLRCINGLETISAGSISV 62

Query: 86 AGIRVDD 92
          AG ++ D
Sbjct: 63 AGAQLLD 69


>CAC0879 [E] COG1126 ABC-type polar amino acid transport system, ATPase
          component Cac Clostridium acetobutylicum
          Length = 243

 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 54/66 (81%)

Query: 26 IVRLDQVYKSFGDNQVLKGVSFEVARGEMIAIIGASGSGKSTALRCIDRLETIDSGSIEV 85
          +++++ ++K++GDN+VLKG+S E+  GE++A+IG SG+GKST LRC++ LE  DSG++ +
Sbjct: 1  MIKIESLHKTYGDNEVLKGISLEIKAGEIVAVIGPSGTGKSTFLRCLNYLERPDSGTLLI 60

Query: 86 AGIRVD 91
            +RVD
Sbjct: 61 GDVRVD 66


>AGl381 [E] COG1126 ABC-type polar amino acid transport system, ATPase
          component Atu Agrobacterium tumefaciens strain C58
          (Cereon)
          Length = 243

 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 48/61 (78%)

Query: 27 VRLDQVYKSFGDNQVLKGVSFEVARGEMIAIIGASGSGKSTALRCIDRLETIDSGSIEVA 86
          V ++ V+KSFG  +VLKGVS  V RGE+ A+IG SGSGKST LRC++ LE I+SG IE+A
Sbjct: 4  VIVENVHKSFGALEVLKGVSLTVGRGEVFALIGRSGSGKSTLLRCMNGLEKINSGRIEIA 63

Query: 87 G 87
          G
Sbjct: 64 G 64


>SMa0508 [E] COG1126 ABC-type polar amino acid transport system, ATPase
          component Sme Sinorhizobium meliloti
          Length = 243

 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 50/68 (73%)

Query: 26 IVRLDQVYKSFGDNQVLKGVSFEVARGEMIAIIGASGSGKSTALRCIDRLETIDSGSIEV 85
          +V    + KSFG  QVLKGVS  V  GE++A+IG SGSGKST LRC++ LE++DSG IEV
Sbjct: 3  VVVAKNIRKSFGGLQVLKGVSLTVEGGEVVALIGGSGSGKSTFLRCLNGLESVDSGEIEV 62

Query: 86 AGIRVDDR 93
          AG R+  +
Sbjct: 63 AGHRMSRK 70


>AGc2580 [E] COG1126 ABC-type polar amino acid transport system, ATPase
          component Atu Agrobacterium tumefaciens strain C58
          (Cereon)
          Length = 243

 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 38/66 (57%), Positives = 49/66 (74%)

Query: 26 IVRLDQVYKSFGDNQVLKGVSFEVARGEMIAIIGASGSGKSTALRCIDRLETIDSGSIEV 85
          +V +DQV+K +G  +VLKGVS  V  G+++AIIG SGSGKST LRCI+ LE   SG+I  
Sbjct: 3  VVTIDQVHKRYGALEVLKGVSLNVEAGQVVAIIGRSGSGKSTMLRCINGLEEFQSGNITA 62

Query: 86 AGIRVD 91
          AG RV+
Sbjct: 63 AGHRVE 68