BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0081.p (217 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl980GM [E] COG0765 ABC-type amino acid transport system, perme... 244 1e-64 AGc2581 [E] COG0765 ABC-type amino acid transport system, permea... 231 1e-60 SMa0081 [E] COG0765 ABC-type amino acid transport system, permea... 217 2e-56 AGc2569 [E] COG0765 ABC-type amino acid transport system, permea... 200 2e-51 AGl666 [E] COG0765 ABC-type amino acid transport system, permeas... 195 8e-50 >AGl980GM [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 219 Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 119/215 (55%), Positives = 162/215 (75%), Gaps = 1/215 (0%) Query: 4 NFSWTYFFFMVQSIGWTLVLSALAFVLGGIGGFLVMLARISPRAWLRRPAILFIESVQGI 63 F W F F++ ++ WT++L+ +A V GGI GF + LAR S LR A +I+ +QGI Sbjct: 5 TFGWNEFGFLLTALQWTVLLTIIALVGGGIVGFFIALARTSDNKLLRIAAGTYIQVIQGI 64 Query: 64 PLLILLFIVYFGLSVYGLVLPALVAAGLAMMIYASAYLGDIWRGCVEAMPRPQWEASECL 123 P+L++LF+ Y+GLS+ GL LP L+AAG +M IY S YL +IWRGC++A+P+ QWEASE L Sbjct: 65 PVLMILFLSYYGLSLAGLELPPLIAAGASMTIYTSGYLAEIWRGCIQAVPKQQWEASESL 124 Query: 124 SLTRWQTLRLVIIPQATRLSLPPTIGFLVQLIKMTSLASVIGFVELTRAGQIINNSIFQP 183 +LTR Q R VI+PQA R+SLPPT+GF VQ++K TS+AS+IGFVEL RAGQ+INN+ FQP Sbjct: 125 ALTRAQQYRYVILPQAIRISLPPTVGFAVQVVKNTSIASIIGFVELARAGQLINNATFQP 184 Query: 184 FLVFLLVGSFYFLLCYPLSRWSASMERKLNV-SHR 217 F VF+ V YF++CYPLS+ S +ER+L+ S+R Sbjct: 185 FRVFVAVAVLYFIVCYPLSQLSRWLERRLHAGSNR 219 >AGc2581 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 217 Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 108/216 (50%), Positives = 158/216 (73%) Query: 2 MGNFSWTYFFFMVQSIGWTLVLSALAFVLGGIGGFLVMLARISPRAWLRRPAILFIESVQ 61 M F W F F+++ GW++VL+A+AF +G + G + R+S +R A +I +Q Sbjct: 1 MSTFGWPEFLFLLRGAGWSIVLTAIAFSIGSLTGGFFAIMRLSQYGSVRNVAAGYITVIQ 60 Query: 62 GIPLLILLFIVYFGLSVYGLVLPALVAAGLAMMIYASAYLGDIWRGCVEAMPRPQWEASE 121 IP+L++LF+ Y+GL+++G +P L+AA +++ +Y SAYL +IWRG ++A+P+PQWEAS Sbjct: 61 SIPVLMILFMSYYGLTLFGFEIPPLLAASVSLSVYVSAYLAEIWRGSIQAVPKPQWEASA 120 Query: 122 CLSLTRWQTLRLVIIPQATRLSLPPTIGFLVQLIKMTSLASVIGFVELTRAGQIINNSIF 181 L+LTR+Q R VI+PQA RLSLPPT+GFLVQL+K TS+ SV+GFVEL+RAGQ++NN+ F Sbjct: 121 SLALTRFQQYRYVILPQALRLSLPPTVGFLVQLVKNTSIVSVVGFVELSRAGQLVNNATF 180 Query: 182 QPFLVFLLVGSFYFLLCYPLSRWSASMERKLNVSHR 217 +PF VF +V YF +C+PLSR S +ER L+V Sbjct: 181 RPFQVFFVVALLYFAICFPLSRLSRHLERVLHVGRN 216 >SMa0081 [E] COG0765 ABC-type amino acid transport system, permease component Sme Sinorhizobium meliloti Length = 218 Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 109/213 (51%), Positives = 151/213 (70%) Query: 1 MMGNFSWTYFFFMVQSIGWTLVLSALAFVLGGIGGFLVMLARISPRAWLRRPAILFIESV 60 M+ F W F +V + WT+ LSA+AF G +GG LV L R+S LR A FI Sbjct: 1 MIRAFGWNEFLVIVAAAQWTIALSAIAFAGGSVGGLLVALMRVSETRALRLFATGFIRVF 60 Query: 61 QGIPLLILLFIVYFGLSVYGLVLPALVAAGLAMMIYASAYLGDIWRGCVEAMPRPQWEAS 120 QG PLL+ LF+V+FG++++G + +AA +A+ ++ASA+LG+IWRGC+EA+P+ Q EA+ Sbjct: 61 QGTPLLMQLFLVFFGMNIFGFAINPWIAATIALALHASAFLGEIWRGCIEAVPKGQREAA 120 Query: 121 ECLSLTRWQTLRLVIIPQATRLSLPPTIGFLVQLIKMTSLASVIGFVELTRAGQIINNSI 180 L L ++++R VI+PQA R+++ PT+GFLVQLIK TSLAS+IGF ELTR GQIINN+ Sbjct: 121 TALGLRYFRSMRHVILPQAARIAVAPTVGFLVQLIKGTSLASIIGFTELTRQGQIINNAT 180 Query: 181 FQPFLVFLLVGSFYFLLCYPLSRWSASMERKLN 213 F PFLVF V + YFLLC+PLS + ME + + Sbjct: 181 FSPFLVFGTVAAVYFLLCWPLSLIARRMETRFS 213 >AGc2569 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 219 Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 154/212 (72%) Query: 6 SWTYFFFMVQSIGWTLVLSALAFVLGGIGGFLVMLARISPRAWLRRPAILFIESVQGIPL 65 +W ++ + WT++LS ++F GG+ L++ RIS + +R A ++E QG PL Sbjct: 6 TWDILRNLLLATRWTVLLSLVSFAGGGLVALLLLFMRISRKKSMRVFARYYVELFQGTPL 65 Query: 66 LILLFIVYFGLSVYGLVLPALVAAGLAMMIYASAYLGDIWRGCVEAMPRPQWEASECLSL 125 L+ LFI +FGL + G+ +PA +AAGL ++++A+A+L +IWRGCVE++ + QWEAS L++ Sbjct: 66 LMQLFIAFFGLGLVGIDVPAWLAAGLTLILWAAAFLTEIWRGCVESVAKGQWEASASLAM 125 Query: 126 TRWQTLRLVIIPQATRLSLPPTIGFLVQLIKMTSLASVIGFVELTRAGQIINNSIFQPFL 185 R Q +R VI+PQA R+++PPT+GF VQ+IK T++ S+IGFVEL++AG ++ N+ FQPF Sbjct: 126 GRLQQMRYVILPQAMRVAIPPTVGFFVQVIKGTAVTSIIGFVELSKAGTVVTNATFQPFT 185 Query: 186 VFLLVGSFYFLLCYPLSRWSASMERKLNVSHR 217 V+ LV YF LC+PLS+ S +ERKLNV+HR Sbjct: 186 VYGLVALIYFALCWPLSKSSQILERKLNVAHR 217 >AGl666 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 216 Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 100/216 (46%), Positives = 152/216 (70%) Query: 2 MGNFSWTYFFFMVQSIGWTLVLSALAFVLGGIGGFLVMLARISPRAWLRRPAILFIESVQ 61 M + FF++Q + WTL L+ + F+ GG+ G V LAR++ ++R ++ FI Q Sbjct: 1 MASIGPNELFFLMQGLKWTLALTLIGFIGGGVFGLCVALARVADSPAIQRASMAFIAVFQ 60 Query: 62 GIPLLILLFIVYFGLSVYGLVLPALVAAGLAMMIYASAYLGDIWRGCVEAMPRPQWEASE 121 G PLL+ LF+VY+G+++ GL + A +A +A ++ASA+LG+IWRG ++A+P+ Q EA+ Sbjct: 61 GTPLLMQLFVVYYGVALAGLNVDAWIAVAIAFTLHASAFLGEIWRGGIQAVPKGQTEAAN 120 Query: 122 CLSLTRWQTLRLVIIPQATRLSLPPTIGFLVQLIKMTSLASVIGFVELTRAGQIINNSIF 181 L L ++ V++PQA ++SLP TIGFLVQLIK TSLA+++GFVEL+RAGQI++N F Sbjct: 121 ALGLHYVSRMKDVVLPQAFKISLPATIGFLVQLIKGTSLAAIVGFVELSRAGQIVSNQTF 180 Query: 182 QPFLVFLLVGSFYFLLCYPLSRWSASMERKLNVSHR 217 +P VF +VG YFL+C+PLS W A +E++L + R Sbjct: 181 RPLTVFAIVGIIYFLICWPLSLWGAGVEKRLQAASR 216