BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0068.p (314 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA4734 [S] COG3662 Uncharacterized protein conserved in bacteria... 356 4e-98 RSp1255 [S] COG3662 Uncharacterized protein conserved in bacteri... 289 5e-78 CC2570 Non COG 137 2e-32 MT0848 [S] COG3662 Uncharacterized protein conserved in bacteria... 63 7e-10 Rv0826 [S] COG3662 Uncharacterized protein conserved in bacteria... 63 8e-10 >PA4734 [S] COG3662 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 293 Score = 356 bits (913), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 176/291 (60%), Positives = 219/291 (75%), Gaps = 2/291 (0%) Query: 23 MEFLRQRIEANVLAISR-GPGSADFLQPPGDPGLFGPDSAAWQVHSDFTAMLTGGVAALL 81 ME +R+ IE+ VL+++ G DF P GDPGLFGPD+A W+VH DF++M+ GG+ ALL Sbjct: 1 MESVRRHIESQVLSLTGLAVGGVDFESPKGDPGLFGPDAACWKVHGDFSSMMIGGIGALL 60 Query: 82 LQMLHPLPLAGVWDHSNFQADMLGRLRRTAQFVAGTTFGSRADAERLIARVKQIHLGVTG 141 LQMLHPL LAGVWDHSNF+ D+LGRLRRT QF++ TT+G ADAERLI RV++IH V G Sbjct: 61 LQMLHPLALAGVWDHSNFRDDLLGRLRRTGQFISATTYGPLADAERLIERVRRIHESVIG 120 Query: 142 VAPDGRPYAASDPDLLTWVHVAEVHCFLQGYLRYRRPDFPAARQDQYLDEIACVAEALGA 201 PDG PY+ASDPDLLTWVHVAEV FL+ YLRY PD P + QD+Y EIA VAE LGA Sbjct: 121 QLPDGTPYSASDPDLLTWVHVAEVSSFLKSYLRYLNPDLPGSEQDRYYSEIALVAERLGA 180 Query: 202 REVPRSRAAIADYIARMRPQLRCDDRTRATLQLVLNAPAPNTVAQPWTRLMMRGGVDLLP 261 R VPR R IA Y+ MRP+LRCD+RTR ++++ NAPAP+T+A+P+ LM+R G +LLP Sbjct: 181 RAVPRDRQQIAAYLEAMRPRLRCDERTREVVRILFNAPAPSTLARPFGALMLRAGAELLP 240 Query: 262 PWAQEMLGVTPRGPLRRELLRRSVLLAAQPIRWAMRNGSIHLARRRMGLPP 312 WA ML + P PL+R L+R SV + +RWA+RN S+H A RRMGLPP Sbjct: 241 EWAGSMLDL-PFSPLQRRLIRGSVRRSVPLLRWAVRNASMHRACRRMGLPP 290 >RSp1255 [S] COG3662 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 298 Score = 289 bits (740), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 149/278 (53%), Positives = 189/278 (67%), Gaps = 3/278 (1%) Query: 26 LRQRIEANVLAISRGPG--SADFLQPPGDPGLFGPDSAAWQVHSDFTAMLTGGVAALLLQ 83 LR+RI V ++R G + D PPGDPGLFGPD+ WQVH+DF +M+ GGV+ALLLQ Sbjct: 8 LRERIVTQVRGMTRASGGLTLDIASPPGDPGLFGPDAVCWQVHADFPSMMAGGVSALLLQ 67 Query: 84 MLHPLPLAGVWDHSNFQADMLGRLRRTAQFVAGTTFGSRADAERLIARVKQIHLGVTGVA 143 LHP LAG+WDHS+F+ D+ GRL RTAQFVAGTT+GSR DA LI RVK IH V G+A Sbjct: 68 ALHPRALAGIWDHSSFRDDLQGRLGRTAQFVAGTTYGSRRDALALIERVKAIHSRVHGIA 127 Query: 144 PDGRPYAASDPDLLTWVHVAEVHCFLQGYLRYRRPDFPAARQDQYLDEIACVAEALGARE 203 PDGRPY+A+DPDLLTWVHVAE+ FL GYLRY RQD+Y +E A VA LGAR+ Sbjct: 128 PDGRPYSANDPDLLTWVHVAEMSSFLAGYLRYVDAHLSGDRQDRYFEETALVAMLLGARD 187 Query: 204 VPRSRAAIADYIARMRPQLRCDDRTRATLQLVLNAPAPNTVAQPWTRLMMRGGVDLLPPW 263 VP SRAA+ Y+ MR +L DRTR ++++++ AP QP R+ + G+ LLPPW Sbjct: 188 VPTSRAAVQAYLNAMRAELVASDRTRTVVEVLMSWQAPRPSLQPAVRMFLDAGIQLLPPW 247 Query: 264 AQEMLGVTPRGPLRRELLRRSVLLAAQPIRWAMRNGSI 301 A ML + + LR ++ A +RWA+R GS+ Sbjct: 248 ALTMLALE-QPTLRAAFTTAAMRTLAPTLRWALREGSV 284 >CC2570 Non COG Length = 299 Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 80/226 (35%), Positives = 113/226 (50%), Gaps = 1/226 (0%) Query: 45 DFLQPPGDPGLFGPDSAAWQVHSDFTAMLTGGVAALLLQMLHPLPLAGVWDHSNFQADML 104 D+ PPG+P L P S W+V+ + A+ GGVAA+LL+ P +GVWDHS F+AD + Sbjct: 13 DYANPPGEPALLDPGSMHWRVYKNPIALAVGGVAAVLLEFAEPRIRSGVWDHSTFKADPI 72 Query: 105 GRLRRTAQFVAGTTFGSRADAERLIARVKQIHLGVTGVAPDGRPYAASDPDLLTWVHVAE 164 GR RT +G + A R+I V +H VTG P G Y A DP+LL WV Sbjct: 73 GRAMRTGTAALIGVYGPASAARRVIQGVTHMHARVTGETPGGEAYTALDPELLDWVAATA 132 Query: 165 VHCFLQGYLRYRRPDFPAARQDQYLDEIACVAEALGAREVPRSRAAIADYIARMRPQLRC 224 V+ F+ Y R+ P A + ++ +E A VA GA P S A + + P+ Sbjct: 133 VYGFVTAYDRFVAP-LTEADKTRFYEEAAPVARLYGATASPGSEAEFVAMLQALAPRFEP 191 Query: 225 DDRTRATLQLVLNAPAPNTVAQPWTRLMMRGGVDLLPPWAQEMLGV 270 L+ + + A V +P R + R V LLPP +E L + Sbjct: 192 HPIVDEFLETIASGKAAPVVPRPLHRALARAAVSLLPPMVRETLAL 237 >MT0848 [S] COG3662 Uncharacterized protein conserved in bacteria MtC Mycobacterium tuberculosis CDC1551 Length = 363 Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 77/184 (41%), Gaps = 8/184 (4%) Query: 56 FGPDSAAWQVHSDFTAMLTGGVAALLLQMLHPLPLAGVWDHSNFQADMLGRLRRTAQFVA 115 GPDS W+ D+ ML G A + Q +HP A V DHS F + RL R+ + Sbjct: 64 LGPDSLTWRYFGDWRGMLQGPWAGSM-QNMHPQLGAAVEDHSTFFRERWPRLLRSLYPIG 122 Query: 116 GTTF-GSRADAERLIARVKQIHLGVTGVAPDGRPYAASDPDLLTWVHVAEVHCFLQGYLR 174 G F G RA + +V+ H+ + GV GR Y A +PD+ W H L R Sbjct: 123 GVVFDGDRAPVTGV--QVRDYHITIKGVDGAGRRYHALNPDVFYWAHATFFVGTLHVAER 180 Query: 175 YRRPDFPAARQDQYLDEIACVAEALG--AREVPRSRAAIADYIARM-RPQLRCDDRTRAT 231 + A++ Q DE G R VP + DY M R L + RA Sbjct: 181 FCG-GLTEAQRRQLFDEHVQWYRMYGMSMRPVPATWEEFQDYWDHMCRNVLENNFAARAV 239 Query: 232 LQLV 235 L L Sbjct: 240 LDLT 243 >Rv0826 [S] COG3662 Uncharacterized protein conserved in bacteria Mtu Mycobacterium tuberculosis H37Rv Length = 351 Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 77/184 (41%), Gaps = 8/184 (4%) Query: 56 FGPDSAAWQVHSDFTAMLTGGVAALLLQMLHPLPLAGVWDHSNFQADMLGRLRRTAQFVA 115 GPDS W+ D+ ML G A + Q +HP A V DHS F + RL R+ + Sbjct: 52 LGPDSLTWRYFGDWRGMLQGPWAGSM-QNMHPQLGAAVEDHSTFFRERWPRLLRSLYPIG 110 Query: 116 GTTF-GSRADAERLIARVKQIHLGVTGVAPDGRPYAASDPDLLTWVHVAEVHCFLQGYLR 174 G F G RA + +V+ H+ + GV GR Y A +PD+ W H L R Sbjct: 111 GVVFDGDRAPVTGV--QVRDYHITIKGVDGAGRRYHALNPDVFYWAHATFFVGTLHVAER 168 Query: 175 YRRPDFPAARQDQYLDEIACVAEALG--AREVPRSRAAIADYIARM-RPQLRCDDRTRAT 231 + A++ Q DE G R VP + DY M R L + RA Sbjct: 169 FCG-GLTEAQRRQLFDEHVQWYRMYGMSMRPVPATWEEFQDYWDHMCRNVLENNFAARAV 227 Query: 232 LQLV 235 L L Sbjct: 228 LDLT 231