BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0033.0021.p         (164 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp1224_2 [NT] COG0840 Methyl-accepting chemotaxis protein Rso R...   194   5e-50
RSc3412 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral...   193   1e-49
YPO4062 [NT] COG0840 Methyl-accepting chemotaxis protein Ype Yer...   192   3e-49
RSp1363 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral...   191   6e-49
YPO1675 [NT] COG0840 Methyl-accepting chemotaxis protein Ype Yer...   189   2e-48

>RSp1224_2 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia
           solanacearum
          Length = 381

 Score =  194 bits (494), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 103/150 (68%), Positives = 123/150 (82%)

Query: 1   VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKQLIGDSVE 60
           VID IAFQTNILALNAAVEAARAGEQGRGFAVVA EVR+LAQRSASAA+EIK LIG SV 
Sbjct: 232 VIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRALAQRSASAAREIKDLIGASVG 291

Query: 61  KVGDGSRLVAQAGDTMQEVVHSVARVTEIVREITLASQEQSDGIEQVNLAITHIDEATQQ 120
           KV  GSRLV +AG TM ++V  V RV+ ++ EI+LA+ EQ+DGI QV+ A+TH+D+ TQ+
Sbjct: 292 KVASGSRLVGEAGKTMDDIVSQVKRVSGMIAEISLATAEQTDGIMQVSQAVTHLDQITQE 351

Query: 121 NAALVEEAAAAARSMQDQAASLTEAVSVFR 150
           NA LVE++A AA S++ QA  L EAV VFR
Sbjct: 352 NATLVEQSALAAESLRVQATRLVEAVGVFR 381


>RSc3412 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia
           solanacearum
          Length = 515

 Score =  193 bits (490), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 105/151 (69%), Positives = 127/151 (84%)

Query: 1   VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKQLIGDSVE 60
           VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVRSLAQRSA+AAKEIK LI  SVE
Sbjct: 363 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSAAAAKEIKALITSSVE 422

Query: 61  KVGDGSRLVAQAGDTMQEVVHSVARVTEIVREITLASQEQSDGIEQVNLAITHIDEATQQ 120
           +V  G+ LV +AG TM+++V ++ RV+ IV EI+ AS EQS G+ QV  A++ +DEATQQ
Sbjct: 423 QVEQGTTLVDRAGATMEQIVGAIQRVSNIVAEISSASAEQSSGVSQVGQAVSQMDEATQQ 482

Query: 121 NAALVEEAAAAARSMQDQAASLTEAVSVFRL 151
           NAALVE++AAAA S+Q QA  L +AV+VF+L
Sbjct: 483 NAALVEQSAAAASSLQGQAQQLVQAVAVFKL 513


>YPO4062 [NT] COG0840 Methyl-accepting chemotaxis protein Ype Yersinia
           pestis
          Length = 649

 Score =  192 bits (487), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 105/151 (69%), Positives = 125/151 (82%)

Query: 1   VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKQLIGDSVE 60
           VI+ IAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSA AAKEI+ LIG+SV 
Sbjct: 461 VINSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSAQAAKEIEGLIGESVS 520

Query: 61  KVGDGSRLVAQAGDTMQEVVHSVARVTEIVREITLASQEQSDGIEQVNLAITHIDEATQQ 120
           +V  G+ LV  AG+TM+E+V SV+ V +I+ EI  AS EQS GI QV+LAI+ +D  TQQ
Sbjct: 521 QVNAGTSLVKNAGNTMEEIVRSVSHVRDIMAEIASASDEQSRGITQVSLAISEMDSTTQQ 580

Query: 121 NAALVEEAAAAARSMQDQAASLTEAVSVFRL 151
           NAALVEE+AAAA S+ +QA  L +AV+VFRL
Sbjct: 581 NAALVEESAAAADSLAEQAILLAQAVAVFRL 611


>RSp1363 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia
           solanacearum
          Length = 543

 Score =  191 bits (485), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 104/155 (67%), Positives = 125/155 (80%)

Query: 1   VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKQLIGDSVE 60
           VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRSLAQRSA+AAKEIK LI DSV 
Sbjct: 363 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAAAAKEIKALIEDSVG 422

Query: 61  KVGDGSRLVAQAGDTMQEVVHSVARVTEIVREITLASQEQSDGIEQVNLAITHIDEATQQ 120
            V  G+  V +AG  +++VV  +  VT IV EI+ +S+EQSDGIEQ+N AIT +D+ATQ+
Sbjct: 423 HVSTGTAKVEEAGQIIRDVVAGIQNVTNIVSEISASSREQSDGIEQINEAITQMDKATQE 482

Query: 121 NAALVEEAAAAARSMQDQAASLTEAVSVFRLDTAL 155
           NA+LVEE+A AA+++QDQA  L + VS F+L   L
Sbjct: 483 NASLVEESATAAQALQDQANQLADMVSTFKLHADL 517


>YPO1675 [NT] COG0840 Methyl-accepting chemotaxis protein Ype Yersinia
           pestis
          Length = 557

 Score =  189 bits (481), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 103/151 (68%), Positives = 125/151 (82%)

Query: 1   VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKQLIGDSVE 60
           VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA EVR+LAQRSA AAKEIK LI DSV 
Sbjct: 367 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKGLIDDSVN 426

Query: 61  KVGDGSRLVAQAGDTMQEVVHSVARVTEIVREITLASQEQSDGIEQVNLAITHIDEATQQ 120
           +V  GS LV  AG+TM ++V++V RVT+I+ EI  AS EQS GI+Q+  A+  +D  TQQ
Sbjct: 427 RVDLGSVLVESAGETMGDIVNAVTRVTDIMGEIASASDEQSRGIDQIGQAVAEMDRVTQQ 486

Query: 121 NAALVEEAAAAARSMQDQAASLTEAVSVFRL 151
           NA+LVEE+A+AA S+++QA+ LT+A+SVF L
Sbjct: 487 NASLVEESASAAASLEEQASMLTQAMSVFVL 517