BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0033.0003.p (212 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3264_1 [R] COG2823 Predicted periplasmic or secreted lipoprot... 130 2e-30 HI1658 [R] COG2823 Predicted periplasmic or secreted lipoprotein... 119 4e-27 PA4426 [R] COG2823 Predicted periplasmic or secreted lipoprotein... 117 2e-26 STM3267 [R] COG2823 Predicted periplasmic or secreted lipoprotei... 113 4e-25 yraP [R] COG2823 Predicted periplasmic or secreted lipoprotein E... 107 1e-23 >RSc3264_1 [R] COG2823 Predicted periplasmic or secreted lipoprotein Rso Ralstonia solanacearum Length = 199 Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 76/190 (40%), Positives = 114/190 (60%) Query: 3 RLRRPLAAVALGGMVALSLQGCFAVFAGGALATTFAATDRRTLGAQTEDKSIVVKGEARI 62 RL+R + AL G+ A L CF +FAG ATDRR QT D+ + ++ E + Sbjct: 10 RLKRTVVLAALAGITATQLTACFPLFAGAVAGGVALATDRRPTATQTIDRGLQMEAENSL 69 Query: 63 PEVVASGSHVNVTAFNRKVLLSGEVPDEASKAAAERETKAIQNVDTVYNELEVGPSSSFG 122 + +HVNVT +NRKVLL+GE DE K + + ++N V NE+ +G SSFG Sbjct: 70 IARYSGLAHVNVTVYNRKVLLTGEARDEQVKQQISQYAQKLENAREVVNEMTIGEFSSFG 129 Query: 123 SRSSDALITSKVLASLVDDKTLYSSAFKITTERGIVYMLGRVTQREGQRAAQIASGVSGV 182 +R++D +T+KV A+L + L ++ K+TTE VY++G VT+ EG+ A ++A V GV Sbjct: 130 ARTNDTYLTTKVKAALAGTEGLPWNSIKVTTEAQAVYLMGVVTESEGEHATEVARTVGGV 189 Query: 183 NKVVTLFEYI 192 KVV +F+Y+ Sbjct: 190 GKVVKVFDYV 199 >HI1658 [R] COG2823 Predicted periplasmic or secreted lipoprotein Hin Haemophilus influenzae Length = 193 Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 70/189 (37%), Positives = 107/189 (56%), Gaps = 4/189 (2%) Query: 7 PLAAVALGGMVALSLQGCFAVFAGGALATTFAATDRRTLGAQTEDKSIVVKGEARI---P 63 PL +A+ + LQGC A GG ATD RT G Q +D+++ K E + Sbjct: 5 PLKKLAILLGATIFLQGCVAAVIGGGAVAAKVATDPRTTGTQIDDETLEFKVENAVEKDA 64 Query: 64 EVVASGSHVNVTAFNRKVLLSGEVPDEASKAAAERETKAIQNVDTVYNELEVGPSSSFGS 123 ++ A G VN ++N +VLL G+VP+ K A K ++ V+ VYNEL V P SF Sbjct: 65 QIKAEG-RVNAVSYNGRVLLIGQVPNSDVKDTATALAKGVEGVNEVYNELTVSPKISFAQ 123 Query: 124 RSSDALITSKVLASLVDDKTLYSSAFKITTERGIVYMLGRVTQREGQRAAQIASGVSGVN 183 S D+ +T++V + + D + ++ K+ +E G V++LG VTQ + AA IAS +SGV Sbjct: 124 ISKDSWLTTQVKSKMFVDGRVKATDVKVISENGEVFLLGNVTQSQANAAADIASKISGVK 183 Query: 184 KVVTLFEYI 192 KV+ +F+Y+ Sbjct: 184 KVIKVFKYL 192 >PA4426 [R] COG2823 Predicted periplasmic or secreted lipoprotein Pae Pseudomonas aeruginosa Length = 192 Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 61/154 (39%), Positives = 94/154 (61%), Gaps = 3/154 (1%) Query: 43 RTLGAQTEDKSIVVKGEARIPEV---VASGSHVNVTAFNRKVLLSGEVPDEASKAAAERE 99 RT+G++ +D I K I + + SH+ V ++N VL++G+ P K+ AE+ Sbjct: 39 RTIGSKIDDSLIETKAAVNIAKADPALDKDSHIVVVSYNGIVLIAGQTPRADLKSKAEQA 98 Query: 100 TKAIQNVDTVYNELEVGPSSSFGSRSSDALITSKVLASLVDDKTLYSSAFKITTERGIVY 159 + +Q V V+NEL+V SS +R++DA IT+K+ ++ D + SS K+ TE GIVY Sbjct: 99 ARTVQKVKNVHNELQVTSPSSLLARNNDAWITTKLKTQMLSDPNVPSSRIKVVTENGIVY 158 Query: 160 MLGRVTQREGQRAAQIASGVSGVNKVVTLFEYIT 193 M+G V Q+E +A ++A GV GV K+V LFEYI Sbjct: 159 MMGLVNQQEAAQAVRVAQGVDGVQKIVKLFEYIN 192 >STM3267 [R] COG2823 Predicted periplasmic or secreted lipoprotein Sty Salmonella typhimurium LT2 Length = 191 Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 75/189 (39%), Positives = 109/189 (57%), Gaps = 7/189 (3%) Query: 7 PLAAVALGGMVALSLQGCFAVFAGGALATTF-AATDRRTLGAQTEDKSIVVKGEARIP-- 63 PLA + + AL LQGC A G A AATD R++G Q +D ++ ++ + + Sbjct: 6 PLAVL----ISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLELRVSSALSKD 61 Query: 64 EVVASGSHVNVTAFNRKVLLSGEVPDEASKAAAERETKAIQNVDTVYNELEVGPSSSFGS 123 E + + +NVTA+ KVLL G+ P+ A A++ ++ VYNE+ G G+ Sbjct: 62 EQIKKETRINVTAYQGKVLLVGQSPNSELSARAKQIAMGVEGTTEVYNEIRQGQPIGLGT 121 Query: 124 RSSDALITSKVLASLVDDKTLYSSAFKITTERGIVYMLGRVTQREGQRAAQIASGVSGVN 183 S+D IT+KV + L+ + SS K+TTE G V++LG VT+REG+ AA IAS VSGV Sbjct: 122 ASNDTWITTKVRSQLLTSDQVKSSNVKVTTENGEVFLLGLVTEREGKAAADIASRVSGVK 181 Query: 184 KVVTLFEYI 192 +V T F YI Sbjct: 182 RVTTAFTYI 190 >yraP [R] COG2823 Predicted periplasmic or secreted lipoprotein Eco Escherichia coli K12 Length = 191 Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/178 (39%), Positives = 102/178 (57%), Gaps = 3/178 (1%) Query: 18 ALSLQGCFAVFAGGALATTF-AATDRRTLGAQTEDKSIVVKGEARIP--EVVASGSHVNV 74 AL LQGC A G A AATD R++G Q +D ++ V+ + + E + + +NV Sbjct: 13 ALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSKDEQIKKEARINV 72 Query: 75 TAFNRKVLLSGEVPDEASKAAAERETKAIQNVDTVYNELEVGPSSSFGSRSSDALITSKV 134 TA+ KVLL G+ P+ A A++ + + VYNE+ G G S+D IT+KV Sbjct: 73 TAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPIGLGEASNDTWITTKV 132 Query: 135 LASLVDDKTLYSSAFKITTERGIVYMLGRVTQREGQRAAQIASGVSGVNKVVTLFEYI 192 + L+ + SS K+TTE G V+++G VT+RE + AA IAS VSGV +V T F +I Sbjct: 133 RSQLLTSDLVKSSNVKVTTENGEVFLMGLVTEREAKAAADIASRVSGVKRVTTAFTFI 190