BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0177.p         (178 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1887_2 [S] COG4950 Uncharacterized protein conserved in bacte...   192   4e-49
SMb20279 Non COG                                                       82   8e-16
AGpA623 [S] COG4950 Uncharacterized protein conserved in bacteri...    78   1e-14

>RSc1887_2 [S] COG4950 Uncharacterized protein conserved in bacteria Rso
           Ralstonia solanacearum
          Length = 188

 Score =  192 bits (488), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 102/170 (60%), Positives = 124/170 (72%), Gaps = 4/170 (2%)

Query: 2   STPVYDISKDVIDQLAGLAAGSPLHGLRHQRDKVAVASQGSYDTLFDPALEGIGLDERLL 61
           STPV     DV+D+ AGL  GS  H LRH RDKVAVA+QGS+D LFD AL G+   ERLL
Sbjct: 4   STPV----NDVVDRAAGLDDGSAAHTLRHARDKVAVATQGSHDALFDAALPGLTPGERLL 59

Query: 62  VALYACRLAGASDLAAHYRARAEAVPADAAQLAAADSGEPEQLPQGRLRAMLVFTRALTQ 121
           VALYACRL  A +L AHYRAR    P DAA L A + G+P  L   RLRA+L F R L +
Sbjct: 60  VALYACRLTPAPELGAHYRARLAETPVDAAALQAVEQGDPATLADARLRAILAFARTLIE 119

Query: 122 RPVEGDKAAIEKLPAAGISTPAVVALSQLIAFVSYQLRVVAGLKAMRAAA 171
           RP++GD+ A+ +LPAAG++TP VV LSQLIAF+SYQ R+VAGL+A+R A+
Sbjct: 120 RPIDGDRDALLRLPAAGLATPDVVTLSQLIAFLSYQTRLVAGLRALREAS 169


>SMb20279 Non COG
          Length = 167

 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 89/163 (54%), Gaps = 10/163 (6%)

Query: 11  DVIDQLAGLAAGSPLHGLRHQRDKVAVASQGSYDTLFDPALEGIGLDERLLVALYACRLA 70
           DVID + GL + SP+  LR +R K+   +Q S+D    PA  G      +  AL A R+ 
Sbjct: 8   DVIDAVLGLDSSSPVLALRERRAKLKHFTQTSHDAALLPAEPG-NFSYAMRAAL-AARIT 65

Query: 71  G---ASDLAAHYRARAEAVPADAAQLAAADSGEPEQLPQG--RLRAMLVFTRALTQRPVE 125
           G   A++L AHY+A+ E   +     + AD   P   P+G  RL  ML     +T +P E
Sbjct: 66  GLWKATELQAHYKAQLEEKGSKPELRSIAD---PAFRPEGDKRLATMLAHVDLVTLKPKE 122

Query: 126 GDKAAIEKLPAAGISTPAVVALSQLIAFVSYQLRVVAGLKAMR 168
             +A IE L + G+    +V L+ LIAFV+YQ+ VVAGLK +R
Sbjct: 123 ATRANIEALYSVGLDDRDIVTLAGLIAFVNYQVLVVAGLKMLR 165


>AGpA623 [S] COG4950 Uncharacterized protein conserved in bacteria Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 178

 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 79/160 (49%), Gaps = 1/160 (0%)

Query: 10  KDVIDQLAGLAAGSPLHGLRHQRDKVAVASQGSYDTLFDPAL-EGIGLDERLLVALYACR 68
           +DVID++ GL A S L  LR +R K+   +Q SY     PA         R  +A     
Sbjct: 17  EDVIDRVLGLDANSDLLKLRERRSKLKHLTQTSYLAALRPAEPRNFSYALRAALAARMSA 76

Query: 69  LAGASDLAAHYRARAEAVPADAAQLAAADSGEPEQLPQGRLRAMLVFTRALTQRPVEGDK 128
           L  A +L AHY  R       + Q + AD     Q    RL+A+L     +T  P    +
Sbjct: 77  LWKAKELHAHYIERLAEEEGGSDQASVADPSSVLQHTDSRLQAILNHVDLVTLTPKNATR 136

Query: 129 AAIEKLPAAGISTPAVVALSQLIAFVSYQLRVVAGLKAMR 168
             IEKL A G+    +V L+ LIA+V+YQ+ VVAGLK MR
Sbjct: 137 ENIEKLYAVGLDDRDIVTLAGLIAYVNYQVLVVAGLKMMR 176