BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0157.p (263 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc2566 [ET] COG0834 ABC-type amino acid transport/signal transd... 262 4e-70 RSc2103 [ET] COG0834 ABC-type amino acid transport/signal transd... 261 8e-70 YPO3257 [ET] COG0834 ABC-type amino acid transport/signal transd... 236 4e-62 SMa0082 [ET] COG0834 ABC-type amino acid transport/signal transd... 174 2e-43 mlr4897 [ET] COG0834 ABC-type amino acid transport/signal transd... 174 2e-43 >AGc2566 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 261 Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 129/257 (50%), Positives = 175/257 (68%), Gaps = 3/257 (1%) Query: 5 KTILALAALATLTG---TACADNLADIQKAGVVKIGVPQDFAPYGSVTSDLQLQGLDIDV 61 + +LA+AA++ G A AD L DI G +++ VPQDF P+GSV +D+ QG DIDV Sbjct: 5 RLLLAIAAVSVTLGFSPAAFADALGDISSRGTIRVAVPQDFPPFGSVGTDMAPQGYDIDV 64 Query: 62 AKLVAKGLGVKAELVPVPISSRMAFLQTHKIDLIISTLGKNAEREKVIDFSQGYAPYNNS 121 A L+ + LGVK ELVPV ++R+ +LQT+K+DL+IS+LGKN +REKVIDFS YAP+ N Sbjct: 65 ANLIGEKLGVKVELVPVTSANRVPYLQTNKVDLVISSLGKNPDREKVIDFSTAYAPFFNG 124 Query: 122 VFGVAAIKVAGPADLANQTVGVARSTFEDLMLTDSVPKSTVIKRYEDNNGLISAYVSGQV 181 VF ++ VA DL+ +T+GV R EDL LT P T IKRYEDNNG ISA+++GQV Sbjct: 125 VFAPDSVTVAKAEDLSGKTIGVTRGAVEDLELTKVAPADTTIKRYEDNNGTISAFLAGQV 184 Query: 182 QIVGTGDFVAYALAEKTPNNKPLLKYIINVSTCYVGMNKGESALMAKVNEALTASKKSGE 241 + V TG+ VA A+ K P +P LK++I S CY+G+NK + AL+ KVN + +K G Sbjct: 185 EAVATGNVVAAAILAKNPPKRPELKFLIKNSPCYIGLNKEQPALLEKVNAIIATAKTDGS 244 Query: 242 LNGIVKKWLNVPLPEKM 258 LN I +KWL LP+ + Sbjct: 245 LNTIAQKWLKTDLPKDL 261 >RSc2103 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Rso Ralstonia solanacearum Length = 267 Score = 261 bits (668), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 127/239 (53%), Positives = 172/239 (71%) Query: 20 ACADNLADIQKAGVVKIGVPQDFAPYGSVTSDLQLQGLDIDVAKLVAKGLGVKAELVPVP 79 A AD LA+IQKAGV+++ +P DF P+GS+ +DL+LQG DID+A LVAK LGVKAELVPV Sbjct: 29 AHADALANIQKAGVIRVAIPNDFPPFGSLGTDLKLQGYDIDMANLVAKELGVKAELVPVT 88 Query: 80 ISSRMAFLQTHKIDLIISTLGKNAEREKVIDFSQGYAPYNNSVFGVAAIKVAGPADLANQ 139 ++R+ FL T K+D++IS+LGKNAER KVIDF+Q YAP+ SV+G + + PADLA + Sbjct: 89 STNRIPFLTTGKVDVVISSLGKNAERAKVIDFTQAYAPFPKSVYGPKDVSIKTPADLAGK 148 Query: 140 TVGVARSTFEDLMLTDSVPKSTVIKRYEDNNGLISAYVSGQVQIVGTGDFVAYALAEKTP 199 T+GV R + EDL LT P S IKRYEDNN +Y+ GQVQ+V G+ VA A+ E+T Sbjct: 149 TIGVTRGSTEDLALTAVAPASATIKRYEDNNATAQSYLIGQVQLVTLGNIVANAVNERTR 208 Query: 200 NNKPLLKYIINVSTCYVGMNKGESALMAKVNEALTASKKSGELNGIVKKWLNVPLPEKM 258 + +K+ + + CYVG+ KGE AL+ KVN A+T K G LN + ++W+ +PLP K+ Sbjct: 209 LRQLDVKFPVEDTPCYVGVAKGEPALLEKVNAAITKLKSDGRLNDLSQRWIKMPLPAKL 267 >YPO3257 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Ype Yersinia pestis Length = 262 Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 117/257 (45%), Positives = 168/257 (65%), Gaps = 2/257 (0%) Query: 1 MKFVKTILALAALATLTGTAC--ADNLADIQKAGVVKIGVPQDFAPYGSVTSDLQLQGLD 58 M K +L L A+ L AD L IQ+ GV+++ VPQDF P+GSV +DLQ QG D Sbjct: 1 MNIKKRMLWLWAVLVLVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD 60 Query: 59 IDVAKLVAKGLGVKAELVPVPISSRMAFLQTHKIDLIISTLGKNAEREKVIDFSQGYAPY 118 ID+A+ +A + +K +LV V ++R+ +LQT K+DL+IS+LGKN EREK I FS+ YAP+ Sbjct: 61 IDMAQYLADKMKLKLQLVSVTSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAYAPF 120 Query: 119 NNSVFGVAAIKVAGPADLANQTVGVARSTFEDLMLTDSVPKSTVIKRYEDNNGLISAYVS 178 VFG ++ P LA +T+GV R ED++L++ PK+ I+RYEDNN +SAY+S Sbjct: 121 FLGVFGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSEIAPKAAQIRRYEDNNTTLSAYLS 180 Query: 179 GQVQIVGTGDFVAYALAEKTPNNKPLLKYIINVSTCYVGMNKGESALMAKVNEALTASKK 238 GQV + TG+ V ALA + P P+ K+++ S CY+G+ +GE AL AKV+ + + + Sbjct: 181 GQVNYLATGNLVISALARQNPKQAPVAKFMLKDSPCYIGLRQGEPALKAKVDALIGDALQ 240 Query: 239 SGELNGIVKKWLNVPLP 255 LNG+ +KWL PLP Sbjct: 241 DNTLNGLSEKWLKAPLP 257 >SMa0082 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Sme Sinorhizobium meliloti Length = 271 Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 96/251 (38%), Positives = 150/251 (59%), Gaps = 1/251 (0%) Query: 6 TILALAALATLTGTACADNLADIQKAGVVKIGVPQDFAPYGSVTSDLQLQGLDIDVAKLV 65 ++L A +A L A A + I+ AG VK+G+ DF P+G + ++ Q G D DVAKL+ Sbjct: 16 SVLGAAIVAGLVAPAAAQTVETIKSAGTVKVGMLVDFPPFGIMDANNQPDGYDADVAKLL 75 Query: 66 AKGLGVKAELVPVPISSRMAFLQTHKIDLIISTLGKNAEREKVIDFSQGYAPYNNSVFGV 125 AK LGV+ +VPV +R+ +LQ++++DL++++LG ER K +DFSQ YA + VFG Sbjct: 76 AKELGVEVTIVPVTGPNRIPYLQSNQVDLLVASLGITEERAKNVDFSQPYAGISIGVFGA 135 Query: 126 AAIKVAGPADLANQTVGVARSTFEDLMLTDSVPKSTVIKRYEDNNGLISAYVSGQVQIVG 185 A + V P DLA +T+GVAR++ +D T P+ I+R++D+ + A +SGQV+++G Sbjct: 136 ADLAVTKPEDLAGKTIGVARASTQDTATTKIAPQDANIQRFDDDASAVQALLSGQVELIG 195 Query: 186 TGDFVAYALAEKTPNNKPLLKYIINVSTCYVGMNKGESALMAKVNEALTASKKSGELNGI 245 + VA + P + K ++ + + KG S ++ VN L K G+LN I Sbjct: 196 VSNVVAAQIEAAAP-GRFNQKLQLSQQVQGIAVRKGSSEMLKFVNGFLDKVKADGQLNAI 254 Query: 246 VKKWLNVPLPE 256 +KWL PLPE Sbjct: 255 HEKWLGSPLPE 265 >mlr4897 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Mlo Mesorhizobium loti Length = 269 Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 100/248 (40%), Positives = 150/248 (60%), Gaps = 1/248 (0%) Query: 7 ILALAALATLTGTACADNLADIQKAGVVKIGVPQDFAPYGSVTSDLQLQGLDIDVAKLVA 66 +L A L T A AD LADI KAG + +GV DF P+ S ++D+ L+G D+DVA+ +A Sbjct: 16 VLGAAGLGIATQAANADALADITKAGTINVGVFADFPPFSSASADMSLKGYDMDVAQYIA 75 Query: 67 KGLGVKAELVPVPISSRMAFLQTHKIDLIISTLGKNAEREKVIDFSQGYAPYNNSVFGVA 126 L VK V V +R+ +L H++D+++S +G + ERE+VIDF+ YAPY +V G A Sbjct: 76 DTLKVKLNPVAVTGQNRIPYLNDHRVDILMS-VGYSKEREQVIDFAAAYAPYYIAVIGPA 134 Query: 127 AIKVAGPADLANQTVGVARSTFEDLMLTDSVPKSTVIKRYEDNNGLISAYVSGQVQIVGT 186 A+ V G DLA++++ V R T ED LT++ P S IKR+++ N +I A++SGQ Q++ Sbjct: 135 AMSVKGKEDLADKSIAVNRGTLEDTSLTEAAPASADIKRFDNYNSVIQAFISGQTQLMVV 194 Query: 187 GDFVAYALAEKTPNNKPLLKYIINVSTCYVGMNKGESALMAKVNEALTASKKSGELNGIV 246 G+ V + K KP K+ + S ++G+NK E L VN+A+ G+L+ Sbjct: 195 GNDVGAQVLAKQDVLKPEQKFQLLTSPSHIGLNKNEDGLKKAVNDAIAKMLADGKLDESS 254 Query: 247 KKWLNVPL 254 K WL PL Sbjct: 255 KAWLKTPL 262