BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0089.p (241 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0923 [C] COG2086 Electron transfer flavoprotein, beta subunit... 399 e-111 PA2952 [C] COG2086 Electron transfer flavoprotein, beta subunit ... 338 8e-93 NMA0242 [C] COG2086 Electron transfer flavoprotein, beta subunit... 326 3e-89 NMB2155 [C] COG2086 Electron transfer flavoprotein, beta subunit... 326 3e-89 BMEI0096 [C] COG2086 Electron transfer flavoprotein, beta subuni... 325 6e-89 >RSc0923 [C] COG2086 Electron transfer flavoprotein, beta subunit Rso Ralstonia solanacearum Length = 249 Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust. Identities = 201/241 (83%), Positives = 219/241 (90%), Gaps = 2/241 (0%) Query: 1 VDYNVKVRVKSDGSGVDIANVKMSMNPFDEIAVEEAVRLKEGGKVTEVIAVSAGVTQCQE 60 +DYNVKVRVK+DGSGVD+ANVKMSMNPFDEIAVEEAVRLKE G TEVIAVS GV QCQE Sbjct: 11 IDYNVKVRVKADGSGVDLANVKMSMNPFDEIAVEEAVRLKEAGVATEVIAVSCGVAQCQE 70 Query: 61 TLRTAMAIGADRGILAEVAADVELQPLAVAKILKALAEKEQPQLIILGKQAIDDDCNQTG 120 TLRTAMAIGADRGIL E ELQPLAVAK+LKAL +KEQPQLIILGKQAIDDD NQTG Sbjct: 71 TLRTAMAIGADRGILVETGE--ELQPLAVAKLLKALIDKEQPQLIILGKQAIDDDANQTG 128 Query: 121 QMLAALLGWPQATFASKVVLEEGKVTVTREVDGGLETLALTLPAIITTDLRLNEPRYVTL 180 QMLAAL G PQATFASKV +++G+ +VTREVDGGLETL++ LPA++TTDLRLNEPRYVTL Sbjct: 129 QMLAALAGLPQATFASKVQIDDGRASVTREVDGGLETLSVKLPAVVTTDLRLNEPRYVTL 188 Query: 181 PNIMKAKKKQLDTVKPDELGVDVAPRVKTLKVTEPAKRSAGVKVPDVATLVAKLKNEAKV 240 PNIMKAKKKQLDTVKP++LGVDVAPR+KTLKV EP KRSAGV VPDVATLVAKLK EAKV Sbjct: 189 PNIMKAKKKQLDTVKPEDLGVDVAPRLKTLKVAEPPKRSAGVMVPDVATLVAKLKTEAKV 248 Query: 241 I 241 + Sbjct: 249 L 249 >PA2952 [C] COG2086 Electron transfer flavoprotein, beta subunit Pae Pseudomonas aeruginosa Length = 249 Score = 338 bits (866), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 176/241 (73%), Positives = 196/241 (81%), Gaps = 2/241 (0%) Query: 1 VDYNVKVRVKSDGSGVDIANVKMSMNPFDEIAVEEAVRLKEGGKVTEVIAVSAGVTQCQE 60 VDYNVKVRVK+D SGVD+ANVKMSMNPF EIAVEEAVRLKE G TE++AVS G T QE Sbjct: 11 VDYNVKVRVKADNSGVDLANVKMSMNPFCEIAVEEAVRLKEKGVATEIVAVSVGPTAAQE 70 Query: 61 TLRTAMAIGADRGILAEVAADVELQPLAVAKILKALAEKEQPQLIILGKQAIDDDCNQTG 120 LRTA+A+GADR IL E ++ EL LAVAK+LKA+ +KEQPQL+ILGKQAID D NQTG Sbjct: 71 QLRTALALGADRAILVE--SNDELNSLAVAKLLKAVVDKEQPQLVILGKQAIDSDNNQTG 128 Query: 121 QMLAALLGWPQATFASKVVLEEGKVTVTREVDGGLETLALTLPAIITTDLRLNEPRYVTL 180 QMLAAL G+ Q TFASKV + KV VTRE+DGGL+T+AL LPAI+TTDLRLNEPRY +L Sbjct: 129 QMLAALTGYAQGTFASKVEVAGDKVNVTREIDGGLQTVALNLPAIVTTDLRLNEPRYASL 188 Query: 181 PNIMKAKKKQLDTVKPDELGVDVAPRVKTLKVTEPAKRSAGVKVPDVATLVAKLKNEAKV 240 PNIMKAKKK LD V PD LGV A VKTLKV PA RSAG+KV VA LV KLKNEAKV Sbjct: 189 PNIMKAKKKPLDVVTPDALGVSTASTVKTLKVEAPAARSAGIKVKSVAELVEKLKNEAKV 248 Query: 241 I 241 I Sbjct: 249 I 249 >NMA0242 [C] COG2086 Electron transfer flavoprotein, beta subunit NmA Neisseria meningitidis Z2491 Length = 249 Score = 326 bits (835), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 164/241 (68%), Positives = 192/241 (79%), Gaps = 2/241 (0%) Query: 1 VDYNVKVRVKSDGSGVDIANVKMSMNPFDEIAVEEAVRLKEGGKVTEVIAVSAGVTQCQE 60 VDYNVKVRVK+DGS VDI NVKMSMNPFDEIAVEEAVRLKE GKV+E++AVS G +C+E Sbjct: 11 VDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVEEAVRLKEAGKVSEIVAVSLGEKKCEE 70 Query: 61 TLRTAMAIGADRGILAEVAADVELQPLAVAKILKALAEKEQPQLIILGKQAIDDDCNQTG 120 TLRTA+A+GADR I V D +L+ LAVAK+LKA+A+KE PQ+ LGKQAIDDD NQ Sbjct: 71 TLRTALAMGADRAI--HVETDTKLESLAVAKLLKAVADKENPQIFFLGKQAIDDDANQVA 128 Query: 121 QMLAALLGWPQATFASKVVLEEGKVTVTREVDGGLETLALTLPAIITTDLRLNEPRYVTL 180 QMLAALL Q TFASKV +E G+V + RE+DGG ET+AL LPA+I+ DLRLNEPR+V L Sbjct: 129 QMLAALLNAAQGTFASKVHIEGGEVQIVREIDGGEETIALKLPAVISADLRLNEPRFVKL 188 Query: 181 PNIMKAKKKQLDTVKPDELGVDVAPRVKTLKVTEPAKRSAGVKVPDVATLVAKLKNEAKV 240 PNIM AKKK L+ + P +L D+ PR+KT+K EP R AGVKV VA LV KLKNEAKV Sbjct: 189 PNIMAAKKKPLEKLAPADLATDILPRLKTVKFAEPKARQAGVKVASVAELVEKLKNEAKV 248 Query: 241 I 241 I Sbjct: 249 I 249 >NMB2155 [C] COG2086 Electron transfer flavoprotein, beta subunit Nme Neisseria meningitidis MC58 Length = 249 Score = 326 bits (835), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 164/241 (68%), Positives = 193/241 (80%), Gaps = 2/241 (0%) Query: 1 VDYNVKVRVKSDGSGVDIANVKMSMNPFDEIAVEEAVRLKEGGKVTEVIAVSAGVTQCQE 60 VDYNVKVRVK+DGS VDI NVKMSMNPFDEIAVEEAVRLKE GKV+E++AVS G +C+E Sbjct: 11 VDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVEEAVRLKEAGKVSEIVAVSLGEKKCEE 70 Query: 61 TLRTAMAIGADRGILAEVAADVELQPLAVAKILKALAEKEQPQLIILGKQAIDDDCNQTG 120 TLRTA+A+GADR I V D +L+ LAVAK+LKA+A+KE PQ+ LGKQAIDDD NQ Sbjct: 71 TLRTALAMGADRAI--HVETDTKLESLAVAKLLKAVADKENPQIFFLGKQAIDDDANQVA 128 Query: 121 QMLAALLGWPQATFASKVVLEEGKVTVTREVDGGLETLALTLPAIITTDLRLNEPRYVTL 180 QMLAALL Q TFASKV +E +V + RE+DGG ET+AL LPA+I+ DLRLNEPR+V L Sbjct: 129 QMLAALLNAAQGTFASKVQIEGDEVQIVREIDGGEETIALKLPAVISADLRLNEPRFVKL 188 Query: 181 PNIMKAKKKQLDTVKPDELGVDVAPRVKTLKVTEPAKRSAGVKVPDVATLVAKLKNEAKV 240 PNIM AKKK L+ + PD+L D++PR+KT+K EP R AGVKV VA LV KLKNEAKV Sbjct: 189 PNIMAAKKKPLEKLTPDDLVADISPRLKTVKFAEPKARQAGVKVASVAELVEKLKNEAKV 248 Query: 241 I 241 I Sbjct: 249 I 249 >BMEI0096 [C] COG2086 Electron transfer flavoprotein, beta subunit Bme Brucella melitensis Length = 248 Score = 325 bits (833), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 162/235 (68%), Positives = 187/235 (79%), Gaps = 2/235 (0%) Query: 1 VDYNVKVRVKSDGSGVDIANVKMSMNPFDEIAVEEAVRLKEGGKVTEVIAVSAGVTQCQE 60 VDYNVK+RVK DGSGV++ANVKMSMNPFDEIAVEEA+RLKE GKVTE++AVS G Q QE Sbjct: 11 VDYNVKIRVKGDGSGVELANVKMSMNPFDEIAVEEAIRLKEAGKVTEIVAVSVGPAQAQE 70 Query: 61 TLRTAMAIGADRGILAEVAADVELQPLAVAKILKALAEKEQPQLIILGKQAIDDDCNQTG 120 TLRTA+A+GADR IL V D ++PL VAK+LK + E E+P L+ LGKQAIDDD NQTG Sbjct: 71 TLRTALAMGADRAIL--VKTDETVEPLGVAKVLKGVVEAEKPDLVFLGKQAIDDDSNQTG 128 Query: 121 QMLAALLGWPQATFASKVVLEEGKVTVTREVDGGLETLALTLPAIITTDLRLNEPRYVTL 180 QML+ALL W QATFASKV L EG VTREVDGGL+T+ + LPAI+T DLRLN+PRY +L Sbjct: 129 QMLSALLNWSQATFASKVELGEGSAKVTREVDGGLQTIDVKLPAIVTVDLRLNQPRYASL 188 Query: 181 PNIMKAKKKQLDTVKPDELGVDVAPRVKTLKVTEPAKRSAGVKVPDVATLVAKLK 235 PNIMKAKKK LD P + G D+APR+K LK EP R AGVKV V+ LV KLK Sbjct: 189 PNIMKAKKKPLDEKSPADFGADIAPRLKVLKTEEPGGRKAGVKVGSVSELVEKLK 243