BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0083.p (216 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl980GM [E] COG0765 ABC-type amino acid transport system, perme... 279 3e-75 AGc2581 [E] COG0765 ABC-type amino acid transport system, permea... 257 1e-68 SMa0081 [E] COG0765 ABC-type amino acid transport system, permea... 237 1e-62 AGc2569 [E] COG0765 ABC-type amino acid transport system, permea... 216 3e-56 YPO3255 [E] COG0765 ABC-type amino acid transport system, permea... 205 6e-53 >AGl980GM [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 219 Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 137/213 (64%), Positives = 170/213 (79%) Query: 2 LAEFSFDNFMFLLEAARWTLLLSALAFIGGGIAGFIVALMRTSHLAPLRLLSAVYIQIIQ 61 L F ++ F FLL A +WT+LL+ +A +GGGI GF +AL RTS LR+ + YIQ+IQ Sbjct: 3 LRTFGWNEFGFLLTALQWTVLLTIIALVGGGIVGFFIALARTSDNKLLRIAAGTYIQVIQ 62 Query: 62 GTPVLIILFLSFYGLAIFGYKLPPMVAATIAMTIYSSAYLGEIWRGCIEAVPVPQWEAST 121 G PVL+ILFLS+YGL++ G +LPP++AA +MTIY+S YL EIWRGCI+AVP QWEAS Sbjct: 63 GIPVLMILFLSYYGLSLAGLELPPLIAAGASMTIYTSGYLAEIWRGCIQAVPKQQWEASE 122 Query: 122 ALAMTRWQQLRYVILPQAVRISLPPTVGFLVQIVKNTSIASIIGLVELAQAGKLVSNATF 181 +LA+TR QQ RYVILPQA+RISLPPTVGF VQ+VKNTSIASIIG VELA+AG+L++NATF Sbjct: 123 SLALTRAQQYRYVILPQAIRISLPPTVGFAVQVVKNTSIASIIGFVELARAGQLINNATF 182 Query: 182 QPFLVFPIVAGIYFFFCYPLSRFAFALERKYHA 214 QPF VF VA +YF CYPLS+ + LER+ HA Sbjct: 183 QPFRVFVAVAVLYFIVCYPLSQLSRWLERRLHA 215 >AGc2581 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 217 Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 122/215 (56%), Positives = 170/215 (79%) Query: 2 LAEFSFDNFMFLLEAARWTLLLSALAFIGGGIAGFIVALMRTSHLAPLRLLSAVYIQIIQ 61 ++ F + F+FLL A W+++L+A+AF G + G A+MR S +R ++A YI +IQ Sbjct: 1 MSTFGWPEFLFLLRGAGWSIVLTAIAFSIGSLTGGFFAIMRLSQYGSVRNVAAGYITVIQ 60 Query: 62 GTPVLIILFLSFYGLAIFGYKLPPMVAATIAMTIYSSAYLGEIWRGCIEAVPVPQWEAST 121 PVL+ILF+S+YGL +FG+++PP++AA++++++Y SAYL EIWRG I+AVP PQWEAS Sbjct: 61 SIPVLMILFMSYYGLTLFGFEIPPLLAASVSLSVYVSAYLAEIWRGSIQAVPKPQWEASA 120 Query: 122 ALAMTRWQQLRYVILPQAVRISLPPTVGFLVQIVKNTSIASIIGLVELAQAGKLVSNATF 181 +LA+TR+QQ RYVILPQA+R+SLPPTVGFLVQ+VKNTSI S++G VEL++AG+LV+NATF Sbjct: 121 SLALTRFQQYRYVILPQALRLSLPPTVGFLVQLVKNTSIVSVVGFVELSRAGQLVNNATF 180 Query: 182 QPFLVFPIVAGIYFFFCYPLSRFAFALERKYHAHR 216 +PF VF +VA +YF C+PLSR + LER H R Sbjct: 181 RPFQVFFVVALLYFAICFPLSRLSRHLERVLHVGR 215 >SMa0081 [E] COG0765 ABC-type amino acid transport system, permease component Sme Sinorhizobium meliloti Length = 218 Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 112/212 (52%), Positives = 160/212 (75%) Query: 1 MLAEFSFDNFMFLLEAARWTLLLSALAFIGGGIAGFIVALMRTSHLAPLRLLSAVYIQII 60 M+ F ++ F+ ++ AA+WT+ LSA+AF GG + G +VALMR S LRL + +I++ Sbjct: 1 MIRAFGWNEFLVIVAAAQWTIALSAIAFAGGSVGGLLVALMRVSETRALRLFATGFIRVF 60 Query: 61 QGTPVLIILFLSFYGLAIFGYKLPPMVAATIAMTIYSSAYLGEIWRGCIEAVPVPQWEAS 120 QGTP+L+ LFL F+G+ IFG+ + P +AATIA+ +++SA+LGEIWRGCIEAVP Q EA+ Sbjct: 61 QGTPLLMQLFLVFFGMNIFGFAINPWIAATIALALHASAFLGEIWRGCIEAVPKGQREAA 120 Query: 121 TALAMTRWQQLRYVILPQAVRISLPPTVGFLVQIVKNTSIASIIGLVELAQAGKLVSNAT 180 TAL + ++ +R+VILPQA RI++ PTVGFLVQ++K TS+ASIIG EL + G++++NAT Sbjct: 121 TALGLRYFRSMRHVILPQAARIAVAPTVGFLVQLIKGTSLASIIGFTELTRQGQIINNAT 180 Query: 181 FQPFLVFPIVAGIYFFFCYPLSRFAFALERKY 212 F PFLVF VA +YF C+PLS A +E ++ Sbjct: 181 FSPFLVFGTVAAVYFLLCWPLSLIARRMETRF 212 >AGc2569 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 219 Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 110/215 (51%), Positives = 160/215 (74%), Gaps = 2/215 (0%) Query: 4 EFS-FDNFMFLLEAARWTLLLSALAFIGGGIAGFIVALMRTSHLAPLRLLSAVYIQIIQG 62 EFS +D LL A RWT+LLS ++F GGG+ ++ MR S +R+ + Y+++ QG Sbjct: 3 EFSTWDILRNLLLATRWTVLLSLVSFAGGGLVALLLLFMRISRKKSMRVFARYYVELFQG 62 Query: 63 TPVLIILFLSFYGLAIFGYKLPPMVAATIAMTIYSSAYLGEIWRGCIEAVPVPQWEASTA 122 TP+L+ LF++F+GL + G +P +AA + + ++++A+L EIWRGC+E+V QWEAS + Sbjct: 63 TPLLMQLFIAFFGLGLVGIDVPAWLAAGLTLILWAAAFLTEIWRGCVESVAKGQWEASAS 122 Query: 123 LAMTRWQQLRYVILPQAVRISLPPTVGFLVQIVKNTSIASIIGLVELAQAGKLVSNATFQ 182 LAM R QQ+RYVILPQA+R+++PPTVGF VQ++K T++ SIIG VEL++AG +V+NATFQ Sbjct: 123 LAMGRLQQMRYVILPQAMRVAIPPTVGFFVQVIKGTAVTSIIGFVELSKAGTVVTNATFQ 182 Query: 183 PFLVFPIVAGIYFFFCYPLSRFAFALERKYH-AHR 216 PF V+ +VA IYF C+PLS+ + LERK + AHR Sbjct: 183 PFTVYGLVALIYFALCWPLSKSSQILERKLNVAHR 217 >YPO3255 [E] COG0765 ABC-type amino acid transport system, permease component Ype Yersinia pestis Length = 217 Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 106/209 (50%), Positives = 146/209 (69%) Query: 6 SFDNFMFLLEAARWTLLLSALAFIGGGIAGFIVALMRTSHLAPLRLLSAVYIQIIQGTPV 65 +D LL AARWTLLLS AF GG + + LMR SH + +Y ++ QGTP+ Sbjct: 5 DWDIIRNLLLAARWTLLLSLTAFFGGTLVTLPLMLMRLSHWRWAARVVRLYTELFQGTPL 64 Query: 66 LIILFLSFYGLAIFGYKLPPMVAATIAMTIYSSAYLGEIWRGCIEAVPVPQWEASTALAM 125 L+ LFL+F+GLA+FG + P AA +A+T+++SA+L +IW G I A+P QWEAS L + Sbjct: 65 LMQLFLAFFGLALFGIDVSPWTAAAMALTLFTSAFLVDIWCGSIAALPKGQWEASRCLGL 124 Query: 126 TRWQQLRYVILPQAVRISLPPTVGFLVQIVKNTSIASIIGLVELAQAGKLVSNATFQPFL 185 + Q L VI PQA+RI++ PTVGF VQ++K T++ASIIG VEL +AG +++N T+QPF Sbjct: 125 SFHQTLFRVIAPQAMRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFK 184 Query: 186 VFPIVAGIYFFFCYPLSRFAFALERKYHA 214 VF +VA YF CYPLSR++ LE+K+HA Sbjct: 185 VFGLVALGYFLMCYPLSRYSHYLEKKFHA 213