BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0071.p (389 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC1764 [R] COG2071 Predicted glutamine amidotransferases Cac Cl... 125 2e-28 SP2072 [R] COG2071 Predicted glutamine amidotransferases Spn Str... 122 1e-27 FN0505 [R] COG2071 Predicted glutamine amidotransferases Fnu Fus... 121 3e-27 L120396 [R] COG2071 Predicted glutamine amidotransferases Lla La... 117 5e-26 FN0218 [R] COG2071 Predicted glutamine amidotransferases Fnu Fus... 115 2e-25 >CAC1764 [R] COG2071 Predicted glutamine amidotransferases Cac Clostridium acetobutylicum Length = 241 Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 68/178 (38%), Positives = 95/178 (53%), Gaps = 3/178 (1%) Query: 196 LRDYAKHLDGLVLQGGADVSPQSYAQAATRPEWSGDRVRDMYELELLHEFIEAGKPVLGI 255 +++Y +DGL+L GG D++P Y + T RD YE +L + +E P+LGI Sbjct: 49 IKNYIDIIDGLILSGGEDINPLFYGENPTNKINYTSPERDEYEKKLYLKALEEDMPILGI 108 Query: 256 CRGCQLINVAFGGTLYQDIATDVPTAIPH--VNEQYDSNYHALHFPQGSSLAGMVKTENA 313 CRG QL+N GG LYQDI V + H V + YH ++ + S L + E Sbjct: 109 CRGLQLMNSVSGGNLYQDINMQVENSNGHSPVGISKSNLYHTVNIVKNSKLFNIFCEEEI 168 Query: 314 IVNSIHHQAVHNLGRDLSVEAVSGPDQIVEAIRYRKAPFVMGLQWHPEFHRAGGPELL 371 VNS HHQA+ L + A S D IVE I ++ FV+G+QWHPE+ + PE L Sbjct: 169 KVNSFHHQAIKKLSDKFIISAQS-SDGIVEGIEHKYNTFVLGVQWHPEYLSSKYPEFL 225 >SP2072 [R] COG2071 Predicted glutamine amidotransferases Spn Streptococcus pneumoniae TIGR4 Length = 242 Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 66/167 (39%), Positives = 95/167 (56%), Gaps = 8/167 (4%) Query: 196 LRDYAKHLDGLVLQGGADVSPQSYAQAATRPEWSGDRVRDMYELELLHEFIEAGKPVLGI 255 +RDY + +D L+L GG +V PQ Y + T + VRD +EL LL E + KP++ I Sbjct: 65 VRDYVEMIDKLILTGGQNVHPQFYGEKKTVESDDYNLVRDEFELALLKEALRQNKPIMAI 124 Query: 256 CRGCQLINVAFGGTLYQDIATDVPTAIPHVNEQYDSNYHALHFPQGSSLAGMVKTENAIV 315 CRG QL+NVAFGGTL Q+I +P H++ +GS +A + E+ V Sbjct: 125 CRGVQLVNVAFGGTLNQEIEGH-WQGLPF------GTSHSIETVEGSVVAKLFGKESQ-V 176 Query: 316 NSIHHQAVHNLGRDLSVEAVSGPDQIVEAIRYRKAPFVMGLQWHPEF 362 NS+H Q++ +L + V A+ DQ +EAI ++GLQWHPEF Sbjct: 177 NSVHRQSIKDLAPNFRVTAIDSRDQTIEAIESIDEHRIIGLQWHPEF 223 >FN0505 [R] COG2071 Predicted glutamine amidotransferases Fnu Fusobacterium nucleatum Length = 243 Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 83/233 (35%), Positives = 121/233 (51%), Gaps = 14/233 (6%) Query: 132 MQRTLKIGVSARIFHPESGAKGLRSKTLQYLEESIAQWVMSRDVLVFMIPTVNTNGLVHP 191 M+R IG+S+ + ESG+ + Y+ + V+ + +IP TN V Sbjct: 1 MERKTIIGISSSVIVDESGSFAGYKRA--YVNKDYVDAVVRAGGVPLIIP-FTTNKEVII 57 Query: 192 SNIRLRDYAKHLDGLVLQGGADVSPQSYAQAATRPEWSGDRVRDMYELELLHEFIEAGKP 251 S +L +DGL+L GG DVSP +Y Q ++ RD YE+ LL E + P Sbjct: 58 SQAQL------IDGLILSGGHDVSPYNYGQEPSQKLGETFPERDTYEMILLEESKKRNIP 111 Query: 252 VLGICRGCQLINVAFGGTLYQDIATDVPTAIPHVNEQYDSNY--HALHFPQGSSLAGMVK 309 +LGICRG QLINVA GGTLYQD++ +P I N+ H + + S ++ + Sbjct: 112 ILGICRGSQLINVAAGGTLYQDLSL-IPGNILKHNQVNKPTLKTHIIKIEENSIISSVFG 170 Query: 310 TENAIVNSIHHQAVHNLGRDLSVEAVSGPDQIVEAIRYRKAPFVMGLQWHPEF 362 E +VNS HHQA+ + D V A D +VEAI ++ F++ +QWHPE Sbjct: 171 KE-TMVNSFHHQAIDKVADDFKVVA-RANDGVVEAIEHKTYKFLVAVQWHPEM 221 >L120396 [R] COG2071 Predicted glutamine amidotransferases Lla Lactococcus lactis Length = 236 Score = 117 bits (293), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 68/169 (40%), Positives = 97/169 (57%), Gaps = 7/169 (4%) Query: 195 RLRDYAKHLDGLVLQGGADVSPQSYAQAATRPEWSGDRVRDMYELELLHEFIEAGKPVLG 254 +++Y +D +VL GGADVSP Y + + D +RD +EL + +EA KP+LG Sbjct: 52 NIKNYLTLVDKIVLTGGADVSPYLYGEEPNAKLGTTDPIRDRFELATIKAALEANKPILG 111 Query: 255 ICRGCQLINVAFGGTLYQDIATDVPTAIPHVNEQYDSNY--HALHFPQGSSLAGMVKTEN 312 +CRG QL+NV FGG LYQD++ + I H+ H + Q S+L + EN Sbjct: 112 VCRGLQLLNVYFGGRLYQDLS-QTSSQIKHLQSPTPQEIPTHHISVEQESALGFL--PEN 168 Query: 313 AIVNSIHHQAVHNLGRDLSVEAVSGPDQIVEAIRYRKAPFVMGLQWHPE 361 +VNS HHQ + +LG+ L+ A G D +VEAI K V+ +QWHPE Sbjct: 169 YMVNSFHHQVIKDLGQGLTAIA-HGNDGLVEAIE-NKEKHVLAVQWHPE 215 >FN0218 [R] COG2071 Predicted glutamine amidotransferases Fnu Fusobacterium nucleatum Length = 289 Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/178 (40%), Positives = 101/178 (56%), Gaps = 21/178 (11%) Query: 196 LRDYAKHLDGLVLQGGADVSPQSYAQA------ATRPEWSGDRVRDMYELELLHEFIEAG 249 +R+ K LDGL+L GG DV P Y + A PE RD++E+ L+ I+ Sbjct: 56 IREQVKLLDGLILSGGRDVDPHFYGEEPLEKLEAIFPE------RDVHEMALIRAAIDLK 109 Query: 250 KPVLGICRGCQLINVAFGGTLYQDIATDVPTAIPHVNEQYDSNY---HALHFPQGSSLAG 306 KP+L ICRG Q++NV +GGTLYQDI+ I H Q S+Y H+++ + S L Sbjct: 110 KPILAICRGMQILNVTYGGTLYQDISYAPGEHIKHC--QVGSSYQATHSINIDKNSILFK 167 Query: 307 MV-KTENAIVNSIHHQAVHNLGRDLSVEAVSGPDQIVEAIRYRKAP--FVMGLQWHPE 361 M K+E VNS HHQA+ + + L V A + PD I+EA+ FV+G+Q+HPE Sbjct: 168 MADKSEIERVNSFHHQALKQVAKGLKVVA-TAPDGIIEAVERENEDEVFVIGVQFHPE 224