BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0003.p         (217 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0402 [R] COG2802 Uncharacterized protein, similar to the N-te...   100   4e-21
PA4012 [R] COG2802 Uncharacterized protein, similar to the N-ter...    96   4e-20
VC2303 [R] COG2802 Uncharacterized protein, similar to the N-ter...    86   5e-17
DR2189 [R] COG2802 Uncharacterized protein, similar to the N-ter...    66   6e-11
mll4430 [R] COG2802 Uncharacterized protein, similar to the N-te...    61   2e-09

>RSc0402 [R] COG2802 Uncharacterized protein, similar to the N-terminal
           domain of Lon protease Rso Ralstonia solanacearum
          Length = 216

 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 95/184 (51%), Gaps = 3/184 (1%)

Query: 24  STLFPEGRLPLQIFEVRYLDMIGKCIAEGSSFGVVALTEGSEVRRPGQSERFVGVGTLAR 83
           + LFP G LPL+IFE RY+DM+  C+ E + FGV  +  G+EV     +   V +G +A 
Sbjct: 27  TVLFPGGLLPLRIFEARYIDMVRTCLREQTPFGVCLIERGNEVAADTPTVP-VDIGCIAH 85

Query: 84  IQEWSTPSPGLMRIACLGSERFRIVQAEQQKHGLWTAQVEMMEADRAVTIPEELRNTSQA 143
           I E      GL+ I   G++RF++   +    GL    VE + AD      E   +   A
Sbjct: 86  IVECDMEQLGLLMIKARGTQRFKVRSVDTTVGGLLRGTVEPIGADLEDCKGELFDDCVNA 145

Query: 144 LDNLLQSVLRQGLPDSEVPIAAPYRLDDCGWVANRWAEMMPISVNLKQSLLALDNPLLRL 203
           L  ++ ++      + +VP+A PY      WV NR  E++P+ +  KQ L+ L +  +R+
Sbjct: 146 LRRIVTTL--GAREEGQVPLAEPYDWASPSWVGNRLCELLPVPLKAKQKLMELMDAGMRI 203

Query: 204 ELVQ 207
           E+V 
Sbjct: 204 EIVH 207


>PA4012 [R] COG2802 Uncharacterized protein, similar to the N-terminal
           domain of Lon protease Pae Pseudomonas aeruginosa
          Length = 197

 Score = 96.3 bits (238), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 107/204 (52%), Gaps = 21/204 (10%)

Query: 16  TIPLFPLASTLFPEGRLPLQIFEVRYLDMIGKCIAEGSSFGVVALTEGSEVRRPGQS-ER 74
            +PLFPL + LFP  RL LQIFE RYLDMI +C+ +G+ FGVV + EG EV   G++  R
Sbjct: 2   KLPLFPLNAVLFPGCRLDLQIFEARYLDMISRCMKQGTGFGVVTIGEGREV---GEAPSR 58

Query: 75  FVGVGTLARIQEWSTPSPGLMRIACLGSERFRIVQAEQQKHGLWTAQVEMMEADRAVTIP 134
              VG  A +++W     GL+ I   G  RF+++  E Q   L   ++E  E      +P
Sbjct: 59  LAMVGCEASVRDWQQRPNGLLGIRVEGGRRFQVLSVEVQADQLSVGEIEWFE-----DLP 113

Query: 135 EE-LRNTSQALDNLLQSVLRQGLPDSEVPIAAPYRL--DDCGW--VANRWAEMMPISVNL 189
           E+ L      L  LL SVL      +E P+ A   +  +  G   +AN+ A ++P     
Sbjct: 114 EQPLTYEHNDLAALL-SVL------AEHPMVAALEMGGEPGGQQDLANQLAYLLPFDTER 166

Query: 190 KQSLLALDNPLLRLELVQDALDEL 213
           K  LLAL +  ++L  +Q  L+ L
Sbjct: 167 KLELLALPDAQMQLARIQVLLEHL 190


>VC2303 [R] COG2802 Uncharacterized protein, similar to the N-terminal
           domain of Lon protease Vch Vibrio cholerae
          Length = 193

 Score = 85.9 bits (211), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 83/172 (48%), Gaps = 10/172 (5%)

Query: 15  QTIPLFPLASTLFPEGRLPLQIFEVRYLDMIGKCIAEGSSFGVVALTEGSEVRRPGQSER 74
           + I LFPL+S + PEG++ L+IFE RY  M+ +C   GS FG+      S       SE 
Sbjct: 2   EEIMLFPLSSVVLPEGKMKLRIFEPRYQRMVAQCSKTGSGFGLCLFDSKSNKNANELSE- 60

Query: 75  FVGVGTLARIQEWSTPSPGLMRIACLGSERFRIVQAEQQKHGLWTAQVEMMEADRAVTIP 134
               GTL +I ++ T S GL+ I  +G  RF I +   +  GL  A V+           
Sbjct: 61  ---FGTLVKIVDFETLSDGLLGITVVGIRRFAIRKVRVEYDGLRIATVQWFPD----WPS 113

Query: 135 EELRNTSQALDNLLQSVLRQGLPDSEVPIAAPYRLDDCGWVANRWAEMMPIS 186
           +EL    + L   LQ V RQ     E+     +  DD  WV  RW E++P+S
Sbjct: 114 QELLERERFLGEQLQEVYRQFPQIGELHSLCFF--DDASWVCQRWLELLPLS 163


>DR2189 [R] COG2802 Uncharacterized protein, similar to the N-terminal
           domain of Lon protease Dra Deinococcus radiodurans
          Length = 213

 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 50/92 (54%), Gaps = 1/92 (1%)

Query: 16  TIPLFPLASTLFPEGRLPLQIFEVRYLDMIGKCIAEGSSFGVVALTEGSEVRRPGQSERF 75
           ++PLFPL + LFP   LPL +FE RY  ++ +  A G  FGVV +  G +   P   ER 
Sbjct: 8   SLPLFPLPTVLFPGQALPLYVFEERYRALLRRVQASGEPFGVVWIERGRDSTLP-LHERL 66

Query: 76  VGVGTLARIQEWSTPSPGLMRIACLGSERFRI 107
             VGTLA + E      G   I  +G ERFR+
Sbjct: 67  SLVGTLAHLTEAEVHEDGTSSILVVGGERFRL 98


>mll4430 [R] COG2802 Uncharacterized protein, similar to the N-terminal
           domain of Lon protease Mlo Mesorhizobium loti
          Length = 224

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 2/95 (2%)

Query: 16  TIPLFPL-ASTLFPEGRLPLQIFEVRYLDMIGKCIAEGSSFGVVALTEGSEVRRPGQSER 74
           TIP+FPL  + L P GR+PL IFE RYL M+ + +A     GV+       +R  G+ E 
Sbjct: 18  TIPIFPLEGALLLPGGRMPLNIFEPRYLQMVDEAVAGSRLIGVIQPRLDGALREDGEPE- 76

Query: 75  FVGVGTLARIQEWSTPSPGLMRIACLGSERFRIVQ 109
              VG   RI  +S    G   I+  G  RFRI  
Sbjct: 77  LCNVGCAGRIIAFSETGDGRYLISLQGVFRFRIAH 111