BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0130.p (274 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3044 [KG] COG1349 Transcriptional regulators of sugar metabol... 305 7e-83 PA3583 [KG] COG1349 Transcriptional regulators of sugar metaboli... 258 8e-69 mll0711 Non COG 245 6e-65 YPO0120 [KG] COG1349 Transcriptional regulators of sugar metabol... 244 2e-64 BMEI1750 [KG] COG1349 Transcriptional regulators of sugar metabo... 244 2e-64 >RSc3044 [KG] COG1349 Transcriptional regulators of sugar metabolism Rso Ralstonia solanacearum Length = 261 Score = 305 bits (781), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 146/241 (60%), Positives = 188/241 (78%) Query: 23 MLNPRQQTLLECVRKHGTISVEELAQQLNVTTQTVRRDVKAMVDASLLARYHGGVGLLSS 82 ++ PR + +LE VR+HG +V+ LA+ L VT QT+RRD++ + D LLARYHGGVGL SS Sbjct: 7 LMLPRHRQILEYVRQHGDATVDALARVLGVTAQTIRRDIRQLEDERLLARYHGGVGLPSS 66 Query: 83 TENIAYPERQVMHADAKRRIGRTVAARVPDGCSLILNLGTTTEEVARALQQHKNLHVVTN 142 ENI Y +RQV+H DAKRRI VA + G SLI+N+GTTTEE+++AL K L V+TN Sbjct: 67 VENIDYDQRQVLHIDAKRRIAEVVARHIEPGRSLIINIGTTTEEISKALVGRKGLRVITN 126 Query: 143 NLNVANSLASNPALEVIIAGGVVRARDRGIVGEATIDFIRQFKVDIGIIGISSIEMDGVL 202 NLNVA+ L+ +P EVI+AGG+VR RDRGIVGEATIDF++QF+VD+GIIG+SSI+ DG L Sbjct: 127 NLNVASILSGSPDAEVIVAGGLVRNRDRGIVGEATIDFMKQFRVDVGIIGVSSIDEDGTL 186 Query: 203 RDFDAREVKVAQTIIEQSRQVWLVADASKFGRQALVKMAHLSQIDVLFTDAPPPPELATL 262 D+D REV+VAQTIIEQSR+VWL AD SKFGR+A+V++ H+SQID FTD P P + + Sbjct: 187 LDYDYREVRVAQTIIEQSREVWLAADHSKFGRRAVVRLGHISQIDKFFTDLPVPEPMVEV 246 Query: 263 L 263 Sbjct: 247 F 247 >PA3583 [KG] COG1349 Transcriptional regulators of sugar metabolism Pae Pseudomonas aeruginosa Length = 251 Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 124/247 (50%), Positives = 177/247 (71%), Gaps = 1/247 (0%) Query: 24 LNPRQQTLLECVRKHGTISVEELAQQLNVTTQTVRRDVKAMVDASLLARYHGGVGLLSST 83 L PRQQ+++E VR+ G +S+EE+AQ VT QT+RRD+ + + LL RYHGG SS Sbjct: 3 LPPRQQSIIEEVRERGYLSIEEMAQMFAVTPQTIRRDINQLAEQGLLRRYHGGAAYDSSI 62 Query: 84 ENIAYPERQVMHADAKRRIGRTVAARVPDGCSLILNLGTTTEEVARALQQHKNLHVVTNN 143 EN AY R D K+RI VA+ VPD SL +N+GTTTE +ARAL H+NL ++TNN Sbjct: 63 ENTAYTMRADQMRDEKQRIAEAVASLVPDNASLFINIGTTTEAIARALLNHRNLKIITNN 122 Query: 144 LNVANSLASNPALEVIIAGGVVRARDRGIVGEATIDFIRQFKVDIGIIGISSIEMDGVLR 203 L+VA +L++ EV++AGG VR+ D GIVG+A +DFI+QF+VD ++GIS I+ DG L Sbjct: 123 LHVAATLSAKEDFEVLVAGGTVRS-DGGIVGQAAVDFIQQFRVDFALVGISGIDEDGSLL 181 Query: 204 DFDAREVKVAQTIIEQSRQVWLVADASKFGRQALVKMAHLSQIDVLFTDAPPPPELATLL 263 DFD +EV+V+Q II+ +RQV+L AD+SKFGR A+V++ +S ++ + +D+PPP +A L+ Sbjct: 182 DFDYQEVRVSQAIIDNARQVFLAADSSKFGRNAVVRLGPISLVNRVISDSPPPAAIARLM 241 Query: 264 AETDVEV 270 A+ V + Sbjct: 242 AQHKVHL 248 >mll0711 Non COG Length = 255 Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 120/248 (48%), Positives = 165/248 (66%) Query: 24 LNPRQQTLLECVRKHGTISVEELAQQLNVTTQTVRRDVKAMVDASLLARYHGGVGLLSST 83 L+PR +++ + HG + V++LA NVT QT+R+D+ + D LL+R HGG S Sbjct: 3 LSPRHAEIIQMAKDHGRVLVDDLATHFNVTPQTIRKDLNDLCDQRLLSRIHGGALFPSGI 62 Query: 84 ENIAYPERQVMHADAKRRIGRTVAARVPDGCSLILNLGTTTEEVARALQQHKNLHVVTNN 143 EN+ Y R+ + AD K IGR A +PD SL +N+GTTTE V++AL H L V+TNN Sbjct: 63 ENMEYEARRKIAADEKEAIGRAAARLIPDNASLFINIGTTTEAVSKALLDHNGLMVITNN 122 Query: 144 LNVANSLASNPALEVIIAGGVVRARDRGIVGEATIDFIRQFKVDIGIIGISSIEMDGVLR 203 +NVAN + P++EV+IAGGVVR D G+VGEA +DFIRQFKVD +IG S+I+ DG L Sbjct: 123 INVANRMRIYPSIEVVIAGGVVRGSDGGVVGEAAVDFIRQFKVDYAVIGASAIDHDGALL 182 Query: 204 DFDAREVKVAQTIIEQSRQVWLVADASKFGRQALVKMAHLSQIDVLFTDAPPPPELATLL 263 DFD REVKVAQ II +R V LV+D +KF R A V++ HLSQ++ TD P + + Sbjct: 183 DFDFREVKVAQAIIANARHVILVSDQTKFERTAPVRIGHLSQVNTFITDRCDIPSVRKIC 242 Query: 264 AETDVEVV 271 E +V+++ Sbjct: 243 QEAEVQLI 250 >YPO0120 [KG] COG1349 Transcriptional regulators of sugar metabolism Ype Yersinia pestis Length = 252 Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 118/244 (48%), Positives = 166/244 (68%) Query: 27 RQQTLLECVRKHGTISVEELAQQLNVTTQTVRRDVKAMVDASLLARYHGGVGLLSSTENI 86 R ++E VR G +S EEL + V+ QT+RRD+ + D + + R+HGG L SS+ N Sbjct: 6 RHDAIIELVRLQGYVSTEELVEHFAVSPQTIRRDLNELADQNKIHRHHGGAALPSSSVNA 65 Query: 87 AYPERQVMHADAKRRIGRTVAARVPDGCSLILNLGTTTEEVARALQQHKNLHVVTNNLNV 146 AY +R+VM ++ K RI + VA+++PDG +L +++GTT E VA AL HK L VVTNNLNV Sbjct: 66 AYNDRKVMWSEEKARIAQRVASQIPDGATLFIDIGTTPEAVAHALMNHKGLRVVTNNLNV 125 Query: 147 ANSLASNPALEVIIAGGVVRARDRGIVGEATIDFIRQFKVDIGIIGISSIEMDGVLRDFD 206 A L + +I+AGG VR RD GI+GEAT+DFI QF++D GI+GIS I+MDG L +FD Sbjct: 126 ATLLTAKEDFRLILAGGEVRTRDGGIIGEATLDFISQFRLDYGILGISGIDMDGSLLEFD 185 Query: 207 AREVKVAQTIIEQSRQVWLVADASKFGRQALVKMAHLSQIDVLFTDAPPPPELATLLAET 266 EV+ + IIE SR V LV D SKFGR A+V + +++ ID LFTD PP + ++ + Sbjct: 186 YHEVRTKRAIIENSRCVMLVTDHSKFGRNAMVNLGNMNLIDYLFTDQQPPASVMKIIEQH 245 Query: 267 DVEV 270 +V++ Sbjct: 246 EVQL 249 >BMEI1750 [KG] COG1349 Transcriptional regulators of sugar metabolism Bme Brucella melitensis Length = 286 Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 127/248 (51%), Positives = 164/248 (66%) Query: 24 LNPRQQTLLECVRKHGTISVEELAQQLNVTTQTVRRDVKAMVDASLLARYHGGVGLLSST 83 L PR ++E R+ G + V++LA +VT QTVR+D+ + A LL R HGG S Sbjct: 26 LTPRHHAIVELARRKGQVLVDDLAVAFDVTPQTVRKDLNDLCRARLLRRIHGGALYPSGV 85 Query: 84 ENIAYPERQVMHADAKRRIGRTVAARVPDGCSLILNLGTTTEEVARALQQHKNLHVVTNN 143 EN+ Y R+ + A K IGR AA +PDG SL +N+GTTTE V+ AL H +L V+TNN Sbjct: 86 ENMEYEARRRIAAHEKESIGRATAAIIPDGASLFINIGTTTEAVSHALVDHNHLMVITNN 145 Query: 144 LNVANSLASNPALEVIIAGGVVRARDRGIVGEATIDFIRQFKVDIGIIGISSIEMDGVLR 203 +NVAN+L P++EV+IAGGVVRA D GIVGEA +DFIRQFKVD IIG S+I+ DG L Sbjct: 146 INVANTLRVYPSIEVVIAGGVVRASDGGIVGEAAVDFIRQFKVDFAIIGTSAIDEDGALL 205 Query: 204 DFDAREVKVAQTIIEQSRQVWLVADASKFGRQALVKMAHLSQIDVLFTDAPPPPELATLL 263 DFD REVKVAQ II +R V LV D++K R A V++ HLSQ++ TD +L L Sbjct: 206 DFDFREVKVAQAIIANARHVILVTDSTKLERTAPVRIGHLSQVNTFITDRCTSLQLQDLC 265 Query: 264 AETDVEVV 271 E VE++ Sbjct: 266 REHGVELI 273