BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0089.p         (55 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NMB1950 [J] COG0828 Ribosomal protein S21 Nme Neisseria meningit...    86   2e-17
NMA0502 [J] COG0828 Ribosomal protein S21 NmA Neisseria meningit...    86   2e-17
RSc0008 [J] COG0828 Ribosomal protein S21 Rso Ralstonia solanace...    76   2e-14
rpsU [J] COG0828 Ribosomal protein S21 Eco Escherichia coli K12        62   4e-10
ZrpsU [J] COG0828 Ribosomal protein S21 EcZ Escherichia coli O15...    62   4e-10

>NMB1950 [J] COG0828 Ribosomal protein S21 Nme Neisseria meningitidis MC58
          Length = 70

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 48/55 (87%)

Query: 1  MRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRIRSQQLPKKLY 55
          MRRFKR +EKTGLLTELRARE YEKPT ERKRK AAAVKR  KR+RSQQLP K+Y
Sbjct: 16 MRRFKRAVEKTGLLTELRAREAYEKPTTERKRKKAAAVKRLQKRLRSQQLPPKMY 70


>NMA0502 [J] COG0828 Ribosomal protein S21 NmA Neisseria meningitidis
          Z2491
          Length = 70

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 48/55 (87%)

Query: 1  MRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRIRSQQLPKKLY 55
          MRRFKR +EKTGLLTELRARE YEKPT ERKRK AAAVKR  KR+RSQQLP K+Y
Sbjct: 16 MRRFKRAVEKTGLLTELRAREAYEKPTTERKRKKAAAVKRLQKRLRSQQLPPKMY 70


>RSc0008 [J] COG0828 Ribosomal protein S21 Rso Ralstonia solanacearum
          Length = 70

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/55 (72%), Positives = 45/55 (81%)

Query: 1  MRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRIRSQQLPKKLY 55
          +RRF+R IE+TGL+ ELRAR  YEKPT ERKRK AAAV R  KR+RSQ LPKKLY
Sbjct: 16 LRRFRREIERTGLIKELRARTAYEKPTTERKRKKAAAVSRTRKRLRSQMLPKKLY 70


>rpsU [J] COG0828 Ribosomal protein S21 Eco Escherichia coli K12
          Length = 71

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/45 (66%), Positives = 37/45 (82%)

Query: 1  MRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRI 45
          +RRFKR+ EK G+L E+R REFYEKPT ERKR  A+AVKRH K++
Sbjct: 16 LRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKL 60


>ZrpsU [J] COG0828 Ribosomal protein S21 EcZ Escherichia coli O157:H7
          EDL933
          Length = 71

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/45 (66%), Positives = 37/45 (82%)

Query: 1  MRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRI 45
          +RRFKR+ EK G+L E+R REFYEKPT ERKR  A+AVKRH K++
Sbjct: 16 LRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKL 60