BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0066.p         (42 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2543 [L] COG0350 Methylated DNA-protein cysteine methyltransf...    68   5e-12

>RSc2543 [L] COG0350 Methylated DNA-protein cysteine methyltransferase Rso
           Ralstonia solanacearum
          Length = 173

 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 31/39 (79%), Positives = 35/39 (89%), Gaps = 1/39 (2%)

Query: 1   VIPCHRVTAAGGLGGFSHHDDEDGFHLEVKRWLLRHEGV 39
           +IPCHRV +A G+GGFS+HD EDGFHL VKRWLLRHEGV
Sbjct: 133 LIPCHRVVSASGIGGFSNHD-EDGFHLNVKRWLLRHEGV 170