BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0029.p         (97 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0526 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit Rso Ra...   162   1e-40
PA0009 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit Pae Pse...   146   1e-35
NMB1932 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit Nme Ne...   145   3e-35
NMA0521 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit NmA Ne...   145   3e-35
SMc00855 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit Sme S...   139   1e-33

>RSc0526 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit Rso Ralstonia
          solanacearum
          Length = 325

 Score =  162 bits (411), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 75/82 (91%), Positives = 78/82 (95%)

Query: 1  MLTFQQIILKLQEYWDAQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRP 60
          MLTFQQ+ILKLQ YWDAQGCALLQP D+EVGAGTSH  TFLRAIGPEPWRAAYVQPSRRP
Sbjct: 1  MLTFQQLILKLQSYWDAQGCALLQPIDLEVGAGTSHVHTFLRAIGPEPWRAAYVQPSRRP 60

Query: 61 KDGRYGENPNRMQHYYQYQVVL 82
          KDGRYGENPNR+QHYYQYQVVL
Sbjct: 61 KDGRYGENPNRLQHYYQYQVVL 82


>PA0009 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit Pae Pseudomonas
          aeruginosa
          Length = 315

 Score =  146 bits (368), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 70/80 (87%)

Query: 3  TFQQIILKLQEYWDAQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRPKD 62
          TFQ +IL LQ YW  QGC +LQPYDMEVGAGT HTATFLRAIGPE W AAYVQPSRRP D
Sbjct: 10 TFQDLILALQNYWAEQGCVVLQPYDMEVGAGTFHTATFLRAIGPETWNAAYVQPSRRPTD 69

Query: 63 GRYGENPNRMQHYYQYQVVL 82
          GRYGENPNR+QHYYQ+QVVL
Sbjct: 70 GRYGENPNRLQHYYQFQVVL 89


>NMB1932 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit Nme Neisseria
          meningitidis MC58
          Length = 301

 Score =  145 bits (365), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 64/82 (78%), Positives = 73/82 (89%)

Query: 1  MLTFQQIILKLQEYWDAQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRP 60
          MLTFQQII KLQ +W  +GC ++QP+DMEVGAGTSH AT LRA+GPEPW AAYVQPSRRP
Sbjct: 1  MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRALGPEPWFAAYVQPSRRP 60

Query: 61 KDGRYGENPNRMQHYYQYQVVL 82
          KDGRYG+NPNR+QHYYQ+QV L
Sbjct: 61 KDGRYGDNPNRLQHYYQFQVAL 82


>NMA0521 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit NmA Neisseria
          meningitidis Z2491
          Length = 301

 Score =  145 bits (365), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 64/82 (78%), Positives = 73/82 (89%)

Query: 1  MLTFQQIILKLQEYWDAQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRP 60
          MLTFQQII KLQ +W  +GC ++QP+DMEVGAGTSH AT LRA+GPEPW AAYVQPSRRP
Sbjct: 1  MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRALGPEPWFAAYVQPSRRP 60

Query: 61 KDGRYGENPNRMQHYYQYQVVL 82
          KDGRYG+NPNR+QHYYQ+QV L
Sbjct: 61 KDGRYGDNPNRLQHYYQFQVAL 82


>SMc00855 [J] COG0752 Glycyl-tRNA synthetase, alpha subunit Sme
          Sinorhizobium meliloti
          Length = 311

 Score =  139 bits (351), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 62/80 (77%), Positives = 70/80 (87%)

Query: 3  TFQQIILKLQEYWDAQGCALLQPYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRPKD 62
          +FQ +IL L  YW  +GCA+LQPYDMEVGAGT H AT LRA+GP+PWRAAYVQPSRRP D
Sbjct: 6  SFQALILTLHNYWADKGCAVLQPYDMEVGAGTFHPATTLRALGPKPWRAAYVQPSRRPTD 65

Query: 63 GRYGENPNRMQHYYQYQVVL 82
          GRYGENPNR+QHYYQYQV+L
Sbjct: 66 GRYGENPNRLQHYYQYQVIL 85