BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0001.p         (120 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2731 [H] COG0853 Aspartate 1-decarboxylase Rso Ralstonia sola...   204   5e-53
aq_476 [H] COG0853 Aspartate 1-decarboxylase Aae Aquifex aeolicus     147   7e-36
DR0718 [H] COG0853 Aspartate 1-decarboxylase Dra Deinococcus rad...   142   2e-34
XF0231 [H] COG0853 Aspartate 1-decarboxylase Xfa Xylella fastidi...   140   1e-33
NMB1282 [H] COG0853 Aspartate 1-decarboxylase Nme Neisseria meni...   138   3e-33

>RSc2731 [H] COG0853 Aspartate 1-decarboxylase Rso Ralstonia solanacearum
          Length = 120

 Score =  204 bits (518), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 95/120 (79%), Positives = 110/120 (91%)

Query: 1   MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI 60
           MQR MLRAK+HRA+VTQ DL+YEGSCGIDEDLL+AAD+RE+EKIELYNVNNGERFSTY I
Sbjct: 1   MQRNMLRAKLHRATVTQADLDYEGSCGIDEDLLDAADMREYEKIELYNVNNGERFSTYII 60

Query: 61  RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVASYKPKVVFVDDKNRITSLKAI 120
           +GKRGSGEISLNGAAAR AH+GD LIICTYAPM++EEVA+YKPK+V + D NRI  +KA+
Sbjct: 61  KGKRGSGEISLNGAAARRAHVGDKLIICTYAPMNEEEVANYKPKIVLLGDGNRIKEIKAV 120


>aq_476 [H] COG0853 Aspartate 1-decarboxylase Aae Aquifex aeolicus
          Length = 124

 Score =  147 bits (370), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 66/118 (55%), Positives = 90/118 (76%)

Query: 1   MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI 60
           M R ML++KIHR +VT  DL+YEGS  +DE L+E AD++ FEKI++YN+NNG RF TY I
Sbjct: 1   MLREMLKSKIHRLTVTDADLHYEGSLSLDEYLMELADLKPFEKIDVYNINNGARFQTYVI 60

Query: 61  RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVASYKPKVVFVDDKNRITSLK 118
              R SGE+ LNGAAARL H GDL+II +YA  ++EE+ +Y PK++FV++KN+   +K
Sbjct: 61  PAPRYSGEVKLNGAAARLGHKGDLIIIASYAQYTEEELENYAPKLIFVNEKNQPVEVK 118


>DR0718 [H] COG0853 Aspartate 1-decarboxylase Dra Deinococcus radiodurans
          Length = 120

 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 87/120 (72%)

Query: 1   MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI 60
           M+RIM RAKIHRA+VTQ DL+Y GS  ID+DLL+AADI   EK++++N+ NG R  TYA+
Sbjct: 1   MERIMFRAKIHRATVTQADLDYVGSVTIDQDLLDAADILVNEKVDIWNITNGNRLHTYAL 60

Query: 61  RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVASYKPKVVFVDDKNRITSLKAI 120
            G RGSG I +NGAAA L   GD++II  +   S+EE  + +PKVV VD KNR+  L+ +
Sbjct: 61  SGPRGSGVIGINGAAAHLMRPGDMVIIAAFGNFSEEEARTLEPKVVLVDAKNRLLELQPV 120


>XF0231 [H] COG0853 Aspartate 1-decarboxylase Xfa Xylella fastidiosa 9a5c
          Length = 142

 Score =  140 bits (352), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 63/115 (54%), Positives = 85/115 (73%)

Query: 1   MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI 60
           MQ  +L+AKIHRA+V+  +LNYEGS  ID  LLEAA + EFEK+ ++NV NG RF+TYAI
Sbjct: 17  MQLSLLKAKIHRATVSHSELNYEGSIAIDGLLLEAAGLYEFEKVHIWNVTNGARFTTYAI 76

Query: 61  RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVASYKPKVVFVDDKNRIT 115
           R + GSG IS+NG AAR   +GDL+I+  +A MS++E A + P +V+VD  N +T
Sbjct: 77  RAEHGSGIISVNGGAARYVQVGDLVIVAAFAQMSEDEAAVFSPNLVYVDAANAMT 131


>NMB1282 [H] COG0853 Aspartate 1-decarboxylase Nme Neisseria meningitidis
           MC58
          Length = 127

 Score =  138 bits (348), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 67/114 (58%), Positives = 84/114 (73%)

Query: 1   MQRIMLRAKIHRASVTQCDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAI 60
           M R ML  KIHRA+VT+ DLNY GS  +D+DLL+AA I   EK+ + N NNGERF TY I
Sbjct: 1   MFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDAAGIYPNEKVAIVNNNNGERFETYTI 60

Query: 61  RGKRGSGEISLNGAAARLAHLGDLLIICTYAPMSDEEVASYKPKVVFVDDKNRI 114
            GKRGSG I LNGAAARL   GD++II +Y  +S+ E+A+++PKVV VD  N+I
Sbjct: 61  AGKRGSGVICLNGAAARLVQKGDIVIIMSYVQLSEPEIAAHEPKVVLVDGNNKI 114