BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0108.p         (163 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA1657 [S] COG3516 Uncharacterized protein conserved in bacteria...   174   9e-44
VCA0107 [S] COG3516 Uncharacterized protein conserved in bacteri...   170   1e-42
YPO3707 [S] COG3516 Uncharacterized protein conserved in bacteri...   152   3e-37
Z0264 [S] COG3516 Uncharacterized protein conserved in bacteria ...   136   2e-32
ECs0233 [S] COG3516 Uncharacterized protein conserved in bacteri...   136   2e-32

>PA1657 [S] COG3516 Uncharacterized protein conserved in bacteria Pae
           Pseudomonas aeruginosa
          Length = 168

 Score =  174 bits (440), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 81/158 (51%), Positives = 118/158 (74%), Gaps = 1/158 (0%)

Query: 3   DGSVAPKERVNIVYRPATGDAKSEVELPLKLLVVGDYTLRNDDTPIEEMKPVNIDKDNFN 62
           +GSVAPKER+N+ ++PATG A+ E+ELPLKLL +GDYT R D+  +E+ KP+ IDK  F+
Sbjct: 4   EGSVAPKERINVTFKPATGGAQEEIELPLKLLAIGDYTQRADERKVEDRKPIGIDKMTFD 63

Query: 63  DVLKAQKLSLDLTVPNKLDDKADPDAVLAMNMSFEHINDFTPDAIVDKVPELRQMIALRD 122
           +VL  Q+L L L+VPN+L ++   D  LA+ +    + DF P +IV++VPEL++++ LRD
Sbjct: 64  EVLAKQELGLTLSVPNRLQEEGGSDE-LAVGLQINSMKDFNPASIVEQVPELKKLMELRD 122

Query: 123 ALKALKGPLGNIPDFRKKVQELIEDEGVRARLLSELGI 160
           AL ALKGPLGN P FRK ++ ++ D+  R+R+L ELG+
Sbjct: 123 ALVALKGPLGNAPAFRKAIESVLADDESRSRVLGELGL 160


>VCA0107 [S] COG3516 Uncharacterized protein conserved in bacteria Vch
           Vibrio cholerae
          Length = 168

 Score =  170 bits (430), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 84/158 (53%), Positives = 116/158 (73%), Gaps = 2/158 (1%)

Query: 3   DGSVAPKERVNIVYRPATGDAKSEVELPLKLLVVGDYTLRNDDTPIEEMKPVNIDKDNFN 62
           +GSVAPKER+NI Y PATGDA++EVELPLK LVVGD+    + TP+EE   V +DK+NF 
Sbjct: 4   EGSVAPKERINIKYIPATGDAQAEVELPLKTLVVGDFKGHAEQTPLEERATVTVDKNNFE 63

Query: 63  DVLKAQKLSLDLTVPNKLDDKADPDAVLAMNMSFEHINDFTPDAIVDKVPELRQMIALRD 122
            V++  +L +  TV NKL D  D +A L + ++F+ + DF PDA+  +VPEL+++I LR+
Sbjct: 64  AVMRESELKITATVKNKLTD--DENAELPVELNFKSLADFAPDAVASQVPELKKLIELRE 121

Query: 123 ALKALKGPLGNIPDFRKKVQELIEDEGVRARLLSELGI 160
           AL ALKGPLGNIP FR+++Q L+  E  R +LL+EL +
Sbjct: 122 ALVALKGPLGNIPAFRERLQSLLNSEESREKLLAELNL 159


>YPO3707 [S] COG3516 Uncharacterized protein conserved in bacteria Ype
           Yersinia pestis
          Length = 165

 Score =  152 bits (385), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 78/157 (49%), Positives = 112/157 (71%), Gaps = 2/157 (1%)

Query: 4   GSVAPKERVNIVYRPATGDAKSEVELPLKLLVVGDYTLRNDDTPIEEMKPVNIDKDNFND 63
            SVAPKER+NI Y P TGD  +E+ELPL LLVVGD     ++T IEE + V+++K+NFN 
Sbjct: 7   SSVAPKERINIKYVPNTGDQVAEIELPLNLLVVGDLKGVREETSIEERQVVSVNKNNFNS 66

Query: 64  VLKAQKLSLDLTVPNKLDDKADPDAVLAMNMSFEHINDFTPDAIVDKVPELRQMIALRDA 123
           V+    +SL   VPN+L+   + D  +A  +S + ++DF+PD +  KVPEL++++ LR+A
Sbjct: 67  VMNEANISLSFNVPNRLEGDGEEDMPVA--LSIKGLDDFSPDNVAKKVPELKKILELREA 124

Query: 124 LKALKGPLGNIPDFRKKVQELIEDEGVRARLLSELGI 160
           L ALKGPLGNIP FR ++Q+L+ +E +R +LL EL I
Sbjct: 125 LVALKGPLGNIPAFRSRLQDLLGNEDMREQLLKELDI 161


>Z0264 [S] COG3516 Uncharacterized protein conserved in bacteria EcZ
           Escherichia coli O157:H7 EDL933
          Length = 166

 Score =  136 bits (342), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 107/158 (67%), Gaps = 3/158 (1%)

Query: 3   DGSVAPKERVNIVYRPATGDAKSEVELPLKLLVVGDYTLRNDDTPIEEMKPVNIDKDNFN 62
           +GSVAP+ER+NI Y P T    +EVELPL +LVVGD     + + ++E + V+++K NF 
Sbjct: 6   EGSVAPRERINISYVPKTDGQTAEVELPLNMLVVGDTGNTQETSSLDERQAVSVNKHNFG 65

Query: 63  DVLKAQKLSLDLTVPNKLDDKADPDAV-LAMNMSFEHINDFTPDAIVDKVPELRQMIALR 121
            V+    + L+ TVP  L      D + +A+N+  + ++DF+PD++  +VPE+ +++ LR
Sbjct: 66  AVMAEAAIGLNFTVPATLKGSTTDDEMNVALNI--KSLDDFSPDSVARQVPEVNKLLELR 123

Query: 122 DALKALKGPLGNIPDFRKKVQELIEDEGVRARLLSELG 159
           +AL ALKGP+GN+P FR ++Q L+E+E  R +LL E+G
Sbjct: 124 EALTALKGPMGNLPAFRTQLQALLENEESREQLLKEIG 161


>ECs0233 [S] COG3516 Uncharacterized protein conserved in bacteria Ecs
           Escherichia coli O157:H7
          Length = 166

 Score =  136 bits (342), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 107/158 (67%), Gaps = 3/158 (1%)

Query: 3   DGSVAPKERVNIVYRPATGDAKSEVELPLKLLVVGDYTLRNDDTPIEEMKPVNIDKDNFN 62
           +GSVAP+ER+NI Y P T    +EVELPL +LVVGD     + + ++E + V+++K NF 
Sbjct: 6   EGSVAPRERINISYVPKTDGQTAEVELPLNMLVVGDTGNTQETSSLDERQAVSVNKHNFG 65

Query: 63  DVLKAQKLSLDLTVPNKLDDKADPDAV-LAMNMSFEHINDFTPDAIVDKVPELRQMIALR 121
            V+    + L+ TVP  L      D + +A+N+  + ++DF+PD++  +VPE+ +++ LR
Sbjct: 66  AVMAEAAIGLNFTVPATLKGSTTDDEMNVALNI--KSLDDFSPDSVARQVPEVNKLLELR 123

Query: 122 DALKALKGPLGNIPDFRKKVQELIEDEGVRARLLSELG 159
           +AL ALKGP+GN+P FR ++Q L+E+E  R +LL E+G
Sbjct: 124 EALTALKGPMGNLPAFRTQLQALLENEESREQLLKEIG 161