BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0105.p         (108 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA5267 [S] COG3157 Hemolysin-coregulated protein (uncharacterize...   110   1e-24
PA1512 [S] COG3157 Hemolysin-coregulated protein (uncharacterize...   110   1e-24
PA0263 [S] COG3157 Hemolysin-coregulated protein (uncharacterize...   110   1e-24
YPO1470 [S] COG3157 Hemolysin-coregulated protein (uncharacteriz...    83   2e-16
YPO0973 [S] COG3157 Hemolysin-coregulated protein (uncharacteriz...    83   2e-16

>PA5267 [S] COG3157 Hemolysin-coregulated protein (uncharacterized) Pae
           Pseudomonas aeruginosa
          Length = 172

 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 48/106 (45%), Positives = 67/106 (63%)

Query: 1   VHLPMTLTKEIDKSSPKLFQALTSGEQMKDVTLEYYRISPKGTEEKYYTVKLSNAILTNM 60
           VH P+ +TK  DK+SP L  ALTSGE++  V +++YR S  GT+E YYT  L +AI+ ++
Sbjct: 64  VHKPVVITKVFDKASPLLLAALTSGERLTKVEIQWYRTSAAGTQEHYYTTVLEDAIIVDI 123

Query: 61  RAWTPNCLTPTNQQMGHMEDISFTYEKITWTFDPDGIEAEDSWLAP 106
           + +  NC  P N    H+ED+ FTY KITWT +  G    D W +P
Sbjct: 124 KDYMHNCQDPGNAHFTHLEDVHFTYRKITWTHEVSGTSGSDDWRSP 169


>PA1512 [S] COG3157 Hemolysin-coregulated protein (uncharacterized) Pae
           Pseudomonas aeruginosa
          Length = 172

 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 48/106 (45%), Positives = 67/106 (63%)

Query: 1   VHLPMTLTKEIDKSSPKLFQALTSGEQMKDVTLEYYRISPKGTEEKYYTVKLSNAILTNM 60
           VH P+ +TK  DK+SP L  ALTSGE++  V +++YR S  GT+E YYT  L +AI+ ++
Sbjct: 64  VHKPVVITKVFDKASPLLLAALTSGERLTKVEIQWYRTSAAGTQEHYYTTVLEDAIIVDI 123

Query: 61  RAWTPNCLTPTNQQMGHMEDISFTYEKITWTFDPDGIEAEDSWLAP 106
           + +  NC  P N    H+ED+ FTY KITWT +  G    D W +P
Sbjct: 124 KDYMHNCQDPGNAHFTHLEDVHFTYRKITWTHEVSGTSGSDDWRSP 169


>PA0263 [S] COG3157 Hemolysin-coregulated protein (uncharacterized) Pae
           Pseudomonas aeruginosa
          Length = 172

 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 48/106 (45%), Positives = 67/106 (63%)

Query: 1   VHLPMTLTKEIDKSSPKLFQALTSGEQMKDVTLEYYRISPKGTEEKYYTVKLSNAILTNM 60
           VH P+ +TK  DK+SP L  ALTSGE++  V +++YR S  GT+E YYT  L +AI+ ++
Sbjct: 64  VHKPVVITKVFDKASPLLLAALTSGERLTKVEIQWYRTSAAGTQEHYYTTVLEDAIIVDI 123

Query: 61  RAWTPNCLTPTNQQMGHMEDISFTYEKITWTFDPDGIEAEDSWLAP 106
           + +  NC  P N    H+ED+ FTY KITWT +  G    D W +P
Sbjct: 124 KDYMHNCQDPGNAHFTHLEDVHFTYRKITWTHEVSGTSGSDDWRSP 169


>YPO1470 [S] COG3157 Hemolysin-coregulated protein (uncharacterized) Ype
           Yersinia pestis
          Length = 163

 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 57/103 (55%)

Query: 1   VHLPMTLTKEIDKSSPKLFQALTSGEQMKDVTLEYYRISPKGTEEKYYTVKLSNAILTNM 60
           +H P   TKEID S+P L++A+T+G+ +K    ++YRI   G E +Y+  KL N  +  +
Sbjct: 55  IHTPFVFTKEIDASTPYLYKAVTTGQTLKTAEFKWYRIDDAGQEVEYFNTKLENVKVVKV 114

Query: 61  RAWTPNCLTPTNQQMGHMEDISFTYEKITWTFDPDGIEAEDSW 103
                +   P  ++  H+E +   YEKITWTF    I   DSW
Sbjct: 115 APKMHDVKDPAKEKHNHLELVELRYEKITWTFKDGNIIHSDSW 157


>YPO0973 [S] COG3157 Hemolysin-coregulated protein (uncharacterized) Ype
           Yersinia pestis
          Length = 163

 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 57/103 (55%)

Query: 1   VHLPMTLTKEIDKSSPKLFQALTSGEQMKDVTLEYYRISPKGTEEKYYTVKLSNAILTNM 60
           +H P   TKEID S+P L++A+T+G+ +K    ++YRI   G E +Y+  KL N  +  +
Sbjct: 55  IHTPFVFTKEIDASTPYLYKAVTTGQTLKTAEFKWYRIDDAGQEVEYFNTKLENVKVVKV 114

Query: 61  RAWTPNCLTPTNQQMGHMEDISFTYEKITWTFDPDGIEAEDSW 103
                +   P  ++  H+E +   YEKITWTF    I   DSW
Sbjct: 115 APKMHDVKDPAKEKHNHLELVELRYEKITWTFKDGNIIHSDSW 157