BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0078.p (311 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl598 [C] COG0584 Glycerophosphoryl diester phosphodiesterase A... 149 1e-35 CC3172 [C] COG0584 Glycerophosphoryl diester phosphodiesterase C... 140 4e-33 mlr8455 [C] COG0584 Glycerophosphoryl diester phosphodiesterase ... 94 6e-19 L18600_2 [C] COG0584 Glycerophosphoryl diester phosphodiesterase... 92 2e-18 BH3700 [C] COG0584 Glycerophosphoryl diester phosphodiesterase B... 90 5e-18 >AGl598 [C] COG0584 Glycerophosphoryl diester phosphodiesterase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 306 Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 98/278 (35%), Positives = 150/278 (53%), Gaps = 14/278 (5%) Query: 33 ALTTATGP-VLVSSHRSCWTETSENSLDGIRRCIAEGIDIGEIDVRTTRDGALVLMHDKT 91 AL T P +L +HR WT T+ENSL +R +A G+++ EID + T DG LV++HD+T Sbjct: 27 ALCTRDNPAILTIAHRGFWTATAENSLASVRAAVAAGVEMIEIDTQATADGRLVVIHDET 86 Query: 92 VDRTTNGHGAVADLTLAEIQALQLYARGGGKGASLTARRVPTLQEALAAARGRILLNLDV 151 +DRTT G G V+ L ++A +L A GG GA +T VPTL+E L ARGRI +N+D Sbjct: 87 LDRTTTGKGTVSALPFEVVRAAKLKAGAGGDGADVTDECVPTLEEVLEEARGRITVNIDT 146 Query: 152 KAA-DIGPMVAAILETDTARDVLLNINAGVDAQ--QVAWARSLGIAVQTLYFDEKTGASA 208 K D+ ++ +L VL+ + +A+ +V + G F + G A Sbjct: 147 KFTRDLPQVMETVLRLGVEDQVLVKTDVDPEAERFEVLGSHWFGRIPHMPMFPVRKGKFA 206 Query: 209 RSGQLQTMARQEPTVLQIIFRDPAVVGEAVQAIGRRPVRLLVNTMAIDIDSGRPMDLAGP 268 L+ + + ++++ F D A + E + R+ +RL +N++ D +D Sbjct: 207 ED--LRRIEALKAPMIEVKFTDIADLAEGRAEMERQNIRLWINSL----DVSHCLD---- 256 Query: 269 YLDTVAVVHPEQVWGKLIASGVSIIQTDEPQRLLAWLK 306 + DT A+ +PE VWG L +G IQTDE + AWLK Sbjct: 257 FNDTRALSNPEAVWGALAEAGTGAIQTDEVEAFTAWLK 294 >CC3172 [C] COG0584 Glycerophosphoryl diester phosphodiesterase Ccr Caulobacter vibrioides Length = 295 Score = 140 bits (353), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 116/295 (39%), Positives = 147/295 (49%), Gaps = 50/295 (16%) Query: 42 LVSSHRSCW---------TETSENSLDGIRRCIAEGIDIGEIDVRTTRDGALVLMHDKTV 92 +V +HR C + ENSL+ ++RCI G+D+ E DVR T+DG LV+MHD +V Sbjct: 1 MVVAHRGCHAAAPDHGLASSAPENSLEALQRCIDIGVDMVETDVRRTQDGVLVIMHDPSV 60 Query: 93 DRTTNGHGAVADLTLAEIQALQLYARGGGKGASLTARRVPTLQEALAAARGRILLNLDVK 152 DRTT+G G VA LTLA+IQAL+L GG A PTL+ L AARGR+L+NL +K Sbjct: 61 DRTTDGGGLVAKLTLAQIQALRL---DGGDEAP------PTLEAFLRAARGRVLVNLHLK 111 Query: 153 AADIGPMVAAILET----DTARDVLLNINAGVDAQQVAWARSLGIAVQTLYFDEK----- 203 GP A E D + VL A D IA Q LY D Sbjct: 112 ----GPFAAQAAEVARRADASDWVLFKARAKTDMSP--------IADQPLYRDVAFMPMV 159 Query: 204 -TGASARSGQL-QTMARQEPTVLQIIFRDPAVVGEAVQAIGRRPVR-----LLVNTMAID 256 GA+ +GQL Q + RQ + I PAV + A G VR V A Sbjct: 160 GEGAARDAGQLGQVITRQASGIRPI----PAVETRRMGAQGFASVRDAAEAARVRVWANT 215 Query: 257 IDSGRPMDLAGPYLDTVAVVHPEQVWGKLIASGVSIIQTDEPQRLLAWLKRKKLR 311 + G D A+ P+ WG+LI GVSIIQTD P RLL +LK ++LR Sbjct: 216 LGMSSWKSFFGVSGDRRALRDPDTSWGRLIDQGVSIIQTDHPARLLGYLKSRRLR 270 >mlr8455 [C] COG0584 Glycerophosphoryl diester phosphodiesterase Mlo Mesorhizobium loti Length = 407 Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 96/303 (31%), Positives = 135/303 (44%), Gaps = 46/303 (15%) Query: 41 VLVSSHRSCWTET-----SENSLDGIRRCIAEGIDIGEIDVRTTRDGALVLMHDKTVDRT 95 V+V++HR+ + +ENSL + IA G +I E+D+R ++DG V+MHD +DRT Sbjct: 100 VMVAAHRAGSMQAGKTLYAENSLAAVEGSIAMGAEIVEVDIRRSKDGEFVVMHDSWLDRT 159 Query: 96 TNGHGAVADLTLAEIQALQLYARGGGKGASLTARRVPTLQEALAAARGRILLNLDVK--A 153 T G V TLAE++ +L G ++T RV TL+E L A R RIL+NLD K Sbjct: 160 TTCKGEVVKHTLAELKTCRLVIEG---TRAVTDERVSTLREMLLATRDRILINLDNKLEV 216 Query: 154 ADIGPMVAAILETDTARDVLLNIN-------AGVDAQQVAWARSLGI-------AVQTLY 199 D+ M+A + A V++ N A V A A + AV Sbjct: 217 GDLPGMIAVARDLGMADQVIVKENLWNQTRIATVKAAMAAIGGGVQFMPIIADDAVHDAG 276 Query: 200 FDEKT--GASARSGQL-------QTMARQEPTVLQIIFRDPAVVGEAVQAIGRRPVRLLV 250 F E S R+ +L QT+ + R AV G + Sbjct: 277 FAETVDHAFSPRAIELINWRAGAQTLTETGGPLFSTRMRAAAVRGN---------WHIWA 327 Query: 251 NTMAIDIDSGRPMDLAGPYLDTVAVVH--PEQVWGKLIASGVSIIQTDEPQRLLAWLKRK 308 +T AI G LAG D +AV P + WG + G +IIQTDEP+ + WL Sbjct: 328 DTYAIVNKPGGF--LAGGRGDELAVQASLPREAWGFWVDRGATIIQTDEPKAAIDWLAAN 385 Query: 309 KLR 311 R Sbjct: 386 AYR 388 >L18600_2 [C] COG0584 Glycerophosphoryl diester phosphodiesterase Lla Lactococcus lactis Length = 227 Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 53/119 (44%), Positives = 72/119 (60%), Gaps = 8/119 (6%) Query: 41 VLVSSHRSCWTETSENSLDGIRRCIAEGIDIGEIDVRTTRDGALVLMHDKTVDRTTNGHG 100 +L+ +HR TE ENS++ + + E D++TT DG V MHD TVDRTTNGHG Sbjct: 3 ILLVNHRGNHTEFPENSVESVLSAKYSAV---ETDIQTTSDGQWVNMHDATVDRTTNGHG 59 Query: 101 AVADLTLAEIQALQLYARGGGKGASLTARRVPTLQEALAAARGRILLNL-DVKAADIGP 158 AVADLTLA+IQ L L G +T +VPTL + LAA + + ++ L ++K A P Sbjct: 60 AVADLTLAQIQNLYLKNNSG----QITQYKVPTLDQYLAACKQKGVIPLIEIKQATATP 114 >BH3700 [C] COG0584 Glycerophosphoryl diester phosphodiesterase Bha Bacillus halodurans Length = 284 Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 3/114 (2%) Query: 45 SHRSCWTETSENSLDGIRRCIAEGIDIGEIDVRTTRDGALVLMHDKTVDRTTNGHGAVAD 104 +HR EN++ ++ +D E DV T+DG LVLMHD TVDRTTNGHG V+D Sbjct: 43 AHRGASGHAPENTMAAFQKGFDMKVDYIEFDVHMTKDGELVLMHDLTVDRTTNGHGYVSD 102 Query: 105 LTLAEIQALQLYARGGGKGASLTARRVPTLQEALAAARGRILLNLDVKAADIGP 158 LTL EI+ + G +VPT +E L RG++ L +++K+ + P Sbjct: 103 LTLDEIKQ---FDAGSWFHEDFVGEKVPTFEETLDVFRGKVGLLIELKSPERYP 153