BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0067.p (209 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll3502 [G] COG1175 ABC-type sugar transport systems, permease c... 193 2e-49 RSc1265 [G] COG1175 ABC-type sugar transport systems, permease c... 165 6e-41 SMb20417 [G] COG1175 ABC-type sugar transport systems, permease ... 164 1e-40 BMEII0624 [G] COG1175 ABC-type sugar transport systems, permease... 155 7e-38 ECs4298 [G] COG1175 ABC-type sugar transport systems, permease c... 150 2e-36 >mll3502 [G] COG1175 ABC-type sugar transport systems, permease components Mlo Mesorhizobium loti Length = 294 Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 94/202 (46%), Positives = 127/202 (62%) Query: 3 LALALAACLELDVRAKRLLRSIFIWPYAVAGVVVGIVLKVLINPVTGLLAFLNHLWPGLW 62 +AL LAA + + RL R + IWPY +A + + + ++ P G +A +N +WPG W Sbjct: 88 IALVLAALTDRQLAGSRLYRVVLIWPYGIAAPALAMAFRFILAPEAGFMAVVNRVWPGFW 147 Query: 63 APHLAGQQAMLVLIAAFAWTQVPLNFILFSAALQRIPADLTGAAAIDGAGPWRRFMDIQL 122 P L G AM +I AF+W V NFI F AA Q IP L AAA+DG+G RRF DIQ Sbjct: 148 DPGLDGADAMASIIVAFSWKYVGYNFIFFLAAFQAIPRSLIEAAAMDGSGVIRRFWDIQF 207 Query: 123 PMIAPALLLAGVLNVIEAFTHGFGLVDALTQGGPGRSTAILAYQIYSDGFIGLDLSGSSA 182 P+I P + V+N+ E+F FG+VD +T GGP +T ++ Y+IYSDGF GLD SG++A Sbjct: 208 PLITPTIFFLLVINITESFQDSFGIVDIMTAGGPANATNLMVYKIYSDGFKGLDYSGAAA 267 Query: 183 LSVILMLFIVALTVLQLRFFRQ 204 S+ILML IV LT+ Q RF + Sbjct: 268 QSIILMLLIVVLTIFQFRFIER 289 >RSc1265 [G] COG1175 ABC-type sugar transport systems, permease components Rso Ralstonia solanacearum Length = 293 Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 84/203 (41%), Positives = 125/203 (61%) Query: 2 TLALALAACLELDVRAKRLLRSIFIWPYAVAGVVVGIVLKVLINPVTGLLAFLNHLWPGL 61 + +LALA + +R + + IWPYAVA V G++ L NP G+++F+ Sbjct: 87 STSLALAYFADRALRGAAFYKMLLIWPYAVAPAVAGVLWSFLFNPSLGIVSFVIRRMGVD 146 Query: 62 WAPHLAGQQAMLVLIAAFAWTQVPLNFILFSAALQRIPADLTGAAAIDGAGPWRRFMDIQ 121 W L G QA+L+++ AW Q+ NF+ F A LQ IP L AAAIDGAGPW+RF I Sbjct: 147 WNFVLNGGQALLLVVVIAAWKQISYNFLFFLAGLQSIPKSLIEAAAIDGAGPWKRFWSIV 206 Query: 122 LPMIAPALLLAGVLNVIEAFTHGFGLVDALTQGGPGRSTAILAYQIYSDGFIGLDLSGSS 181 P+++P V+NV+ AF F ++D++TQGGP ++T L +++Y DG GLD+ GS+ Sbjct: 207 FPLLSPTTFFLMVVNVVYAFFDTFAIIDSVTQGGPFKATETLVFKVYQDGVRGLDIGGSA 266 Query: 182 ALSVILMLFIVALTVLQLRFFRQ 204 A SVILM ++ LT++Q R+ + Sbjct: 267 AQSVILMAVVIVLTIVQFRYVER 289 >SMb20417 [G] COG1175 ABC-type sugar transport systems, permease components Sme Sinorhizobium meliloti Length = 293 Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 86/202 (42%), Positives = 119/202 (58%) Query: 3 LALALAACLELDVRAKRLLRSIFIWPYAVAGVVVGIVLKVLINPVTGLLAFLNHLWPGLW 62 +AL LA + VR K R++ IWPYAVA V G++ + NP G A++ W Sbjct: 87 VALLLATAADRVVRGKTFYRTLLIWPYAVAPAVAGMLWLFMFNPAMGTFAYMLRRNGFHW 146 Query: 63 APHLAGQQAMLVLIAAFAWTQVPLNFILFSAALQRIPADLTGAAAIDGAGPWRRFMDIQL 122 P L G AM++++ A AW Q+ NF+ F A LQ IP L AAAIDGA RRF I Sbjct: 147 DPLLNGNHAMILIVVAAAWKQISYNFLFFVAGLQAIPKSLIEAAAIDGARGTRRFWTIIF 206 Query: 123 PMIAPALLLAGVLNVIEAFTHGFGLVDALTQGGPGRSTAILAYQIYSDGFIGLDLSGSSA 182 P++AP V+N + AF FG++ ++T GGP R+T L Y++Y+DGF+ L+L S+A Sbjct: 207 PLLAPTTFFLLVVNTVYAFFDTFGIIHSVTGGGPARATETLVYKVYNDGFVNLNLGSSAA 266 Query: 183 LSVILMLFIVALTVLQLRFFRQ 204 SVILM ++ LT Q RF + Sbjct: 267 QSVILMAIVIGLTAFQFRFVEK 288 >BMEII0624 [G] COG1175 ABC-type sugar transport systems, permease components Bme Brucella melitensis Length = 251 Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 87/202 (43%), Positives = 118/202 (58%), Gaps = 3/202 (1%) Query: 3 LALALAACLELDVRAKRLLRSIFIWPYAVAGVVVGIVLKVLINPVTGLLAFLNHLWPGLW 62 +AL LA + +R + R++ IWPYAVA V G++ + NP G A+L W Sbjct: 48 VALLLATAADRVIRGQTFYRTLLIWPYAVAPAVAGMLWLFMFNPAMGTFAYLLRRNGIAW 107 Query: 63 APHLAGQQAMLVLIAAFAWTQVPLNFILFSAALQRIPADLTGAAAIDGAGPWRRFMDIQL 122 P L G QAM +++ A AW Q+ NF+ F A LQ IP L AAAIDGA RRF I Sbjct: 108 DPLLDGNQAMGLVVVAAAWKQISYNFLFFVAGLQAIPKSLIEAAAIDGARGARRFWTIVF 167 Query: 123 PMIAPALLLAGVLNVIEAFTHGFGLVDALTQGGPGRSTAILAYQIYSDGFIGLDLSGSSA 182 P++AP V+N + AF FG++ A+T GGP ++T L +Y+DGF+ L+L SSA Sbjct: 168 PLLAPTSFFLLVVNTVYAFFDTFGIIHAVTGGGPAKATETL---VYNDGFVNLNLGSSSA 224 Query: 183 LSVILMLFIVALTVLQLRFFRQ 204 SVILM ++ALT Q RF + Sbjct: 225 QSVILMAIVIALTAFQFRFVEK 246 >ECs4298 [G] COG1175 ABC-type sugar transport systems, permease components Ecs Escherichia coli O157:H7 Length = 295 Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 86/199 (43%), Positives = 119/199 (59%) Query: 3 LALALAACLELDVRAKRLLRSIFIWPYAVAGVVVGIVLKVLINPVTGLLAFLNHLWPGLW 62 ++L AA +E VR R +++ + PYAVA V ++ L NP GL+ + W Sbjct: 89 VSLFFAALVEYIVRGSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLAEFGYDW 148 Query: 63 APHLAGQQAMLVLIAAFAWTQVPLNFILFSAALQRIPADLTGAAAIDGAGPWRRFMDIQL 122 QAM +++ A W Q+ NF+ F AALQ IP L AAAIDGAGP RRF I L Sbjct: 149 NHAQNSGQAMFLVVFASVWKQISYNFLFFYAALQSIPRSLIEAAAIDGAGPIRRFFKIAL 208 Query: 123 PMIAPALLLAGVLNVIEAFTHGFGLVDALTQGGPGRSTAILAYQIYSDGFIGLDLSGSSA 182 P+IAP V+N++ AF F ++DA T GGP ++T L Y+IY +GF GLDL+ S+A Sbjct: 209 PLIAPVSFFLLVVNLVYAFFDTFPVIDAATSGGPVQATTTLIYKIYREGFTGLDLASSAA 268 Query: 183 LSVILMLFIVALTVLQLRF 201 SV+LM ++ LTV+Q R+ Sbjct: 269 QSVVLMFLVIVLTVMQFRY 287