BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0065.p (232 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMb20212 [R] COG0693 Putative intracellular protease/amidase Sme... 216 3e-56 XF1137 [R] COG0693 Putative intracellular protease/amidase Xfa X... 159 4e-39 AGl1155 [R] COG0693 Putative intracellular protease/amidase Atu ... 158 1e-38 SMa1968 [R] COG0693 Putative intracellular protease/amidase Sme ... 155 1e-37 PA2719 [R] COG0693 Putative intracellular protease/amidase Pae P... 145 6e-35 >SMb20212 [R] COG0693 Putative intracellular protease/amidase Sme Sinorhizobium meliloti Length = 226 Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 109/225 (48%), Positives = 146/225 (64%), Gaps = 2/225 (0%) Query: 5 NILMIVTSSSRMGDTDKPTGLWAEELAAPYYALVDAGASVVIASTAGGKAPIDPGSVKPQ 64 ILM++TS R+G+T KPTG W EE AAPYY DAGA V +AS GG+ PIDP S +P Sbjct: 4 KILMVLTSHDRLGNTGKPTGFWLEEFAAPYYVFKDAGAEVTLASPKGGQPPIDPKSDEPA 63 Query: 65 GENDAIVERMLADAELQQRIAATRALGEIEVGAFDAVFFPGGHGTMWDLPTDANVKKTVE 124 + A + R D ++ +A T LGE++ +DAVF+PGGHG MWDL D N +E Sbjct: 64 SQT-AAMGRFKDDPAARKALANTLKLGEVKQEDYDAVFYPGGHGPMWDLVNDRNSIALIE 122 Query: 125 SAYAAGKFIASVCHGAAGLVSAVKADGKPMVAGKRVNSFTDAEEREVGLAEVVPFLLESR 184 Y AGK +A+VCHG A +++ V G+P+V G+RV FT++EE V L +VVPFL+E Sbjct: 123 GFYDAGKPVAAVCHGPA-VLTQVTHLGEPIVKGRRVTGFTNSEEEAVQLTDVVPFLVEDE 181 Query: 185 LRELGGVFEGTDNWQVFAIRDGQLITGQNPQSSERVAEMLLEALE 229 L+ LGG +E +W F + DG+L+TGQNP SS A LL+ L+ Sbjct: 182 LKRLGGRYEKAADWADFTVVDGRLVTGQNPSSSTSAASELLKLLQ 226 >XF1137 [R] COG0693 Putative intracellular protease/amidase Xfa Xylella fastidiosa 9a5c Length = 229 Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 88/227 (38%), Positives = 129/227 (56%), Gaps = 6/227 (2%) Query: 3 KPNILMIVTSSSRMGDTDKPTGLWAEELAAPYYALVDAGASVVIASTAGGKAPIDPGSVK 62 KP IL +VTS GD+ +PTG EL P G V IAS GG PID + Sbjct: 6 KP-ILCVVTSHPIRGDSGEPTGFAMVELTHPLEVFEAVGIPVEIASIRGGHPPIDFFDL- 63 Query: 63 PQGENDAIVERMLADAELQQRIAATRALGEIEVGAFDAVFFPGGHGTMWDLPTDANVKKT 122 +D + +R + + +A + LG+++ + AVFF GGHGTMWD V+ Sbjct: 64 ----SDPVNDRFWKNKAFRHALAHSFVLGDLDPLRYSAVFFVGGHGTMWDFADSLAVQNV 119 Query: 123 VESAYAAGKFIASVCHGAAGLVSAVKADGKPMVAGKRVNSFTDAEEREVGLAEVVPFLLE 182 + + +G +++VCHG A LV+A +DG +VAGK+V +FTD EE EV A VVP+LL Sbjct: 120 IRGIWESGGIVSAVCHGPAALVNATLSDGSYLVAGKKVAAFTDEEETEVKYANVVPYLLA 179 Query: 183 SRLRELGGVFEGTDNWQVFAIRDGQLITGQNPQSSERVAEMLLEALE 229 + L++ G + + NW + DG+LITGQNP S+ V + +++ L+ Sbjct: 180 TTLKQRGALHQSAPNWVENIVVDGRLITGQNPASAYGVGQRVVDQLK 226 >AGl1155 [R] COG0693 Putative intracellular protease/amidase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 230 Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 92/226 (40%), Positives = 121/226 (53%), Gaps = 6/226 (2%) Query: 3 KPNILMIVTSSSRMGDTDKPTGLWAEELAAPYYALVDAGASVVIASTAGGKAPIDPGSVK 62 KP +L ++TS G+T +PTG + E+ P L AG +V AS GGK P+D + Sbjct: 9 KP-VLFVLTSHGTKGETGEPTGFYLGEVTHPLAVLDAAGIAVEFASIDGGKPPVDGLDL- 66 Query: 63 PQGENDAIVERMLADAELQQRIAATRALGEIEVGAFDAVFFPGGHGTMWDLPTDANVKKT 122 ND R + I T L +++ + A+FF GGHG MWD PT V Sbjct: 67 ----NDPTNARYWNSEGFRGAIRNTSRLADLDPKNYAAIFFAGGHGAMWDFPTSPAVNDF 122 Query: 123 VESAYAAGKFIASVCHGAAGLVSAVKADGKPMVAGKRVNSFTDAEEREVGLAEVVPFLLE 182 S Y AG +A+VCHG A LV+ +DG +VAGK V +FTD EER V L +VPFLL Sbjct: 123 TRSIYEAGGVVAAVCHGPAALVNVTLSDGAHLVAGKNVAAFTDDEERAVKLDRIVPFLLA 182 Query: 183 SRLRELGGVFEGTDNWQVFAIRDGQLITGQNPQSSERVAEMLLEAL 228 S L G +W + DG+L+TGQNPQS+ V E L + L Sbjct: 183 STLTMRGAHHYPAADWTAKVVVDGRLVTGQNPQSATGVGEALRDLL 228 >SMa1968 [R] COG0693 Putative intracellular protease/amidase Sme Sinorhizobium meliloti Length = 242 Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 90/226 (39%), Positives = 121/226 (53%), Gaps = 6/226 (2%) Query: 3 KPNILMIVTSSSRMGDTDKPTGLWAEELAAPYYALVDAGASVVIASTAGGKAPIDPGSVK 62 KP +L ++TS S G+T + TG + E+ P L AG V AS AGG+ P+D + Sbjct: 21 KP-VLFVLTSHSVKGETGEYTGFYLGEVTHPLAVLDAAGIPVEFASIAGGEPPVDGLDL- 78 Query: 63 PQGENDAIVERMLADAELQQRIAATRALGEIEVGAFDAVFFPGGHGTMWDLPTDANVKKT 122 +DA+ R + I T L +++ + A+FF GGHG MWD PT V Sbjct: 79 ----HDAVNARYWNSEGFRHAIRNTSRLSDVDPKDYSAIFFAGGHGAMWDFPTSPAVNSV 134 Query: 123 VESAYAAGKFIASVCHGAAGLVSAVKADGKPMVAGKRVNSFTDAEEREVGLAEVVPFLLE 182 Y AG +A+VCHG A LV+ + G +VAGK V +FTD EER V L + VPFLL Sbjct: 135 ARDIYEAGGVVAAVCHGPAALVNITLSSGAHLVAGKNVAAFTDDEERAVKLDKTVPFLLA 194 Query: 183 SRLRELGGVFEGTDNWQVFAIRDGQLITGQNPQSSERVAEMLLEAL 228 S L G +W + DG+L+TGQNPQS+ V E L + L Sbjct: 195 STLSARGAHHHPAADWAAKIVVDGRLVTGQNPQSATGVGEALRDLL 240 >PA2719 [R] COG0693 Putative intracellular protease/amidase Pae Pseudomonas aeruginosa Length = 228 Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 79/222 (35%), Positives = 124/222 (55%), Gaps = 4/222 (1%) Query: 5 NILMIVTSSSRMGDTDKPTGLWAEELAAPYYALVDAGASVVIASTAGGKAPIDPGSVK-P 63 IL +VT+ + D +PTGLW EL Y G + S GG++P++P ++ P Sbjct: 4 RILHVVTNVAHYADPTQPTGLWLSELTHAYEIFAARGYQQRLVSPRGGESPLEPRALGWP 63 Query: 64 QGENDAIVERMLADAELQQRIAATRALGEIEVGAFDAVFFPGGHGTMWDLPTDANVKKTV 123 DA + LAD +A T A +++ AFDA++F GGHG MWD P DA ++ Sbjct: 64 HA--DASAKAWLADETRLALLADTAAPEQVDAEAFDAIYFTGGHGVMWDFPDDAGLQHLT 121 Query: 124 ESAYAAGKFIASVCHGAAGLVSAVKADGKPMVAGKRVNSFTDAEEREVGLAEVVPFLLES 183 Y G ++SVCHG GL++ DG+ +VAG+R+ ++ EE G+A VP+ +E Sbjct: 122 REIYQRGGIVSSVCHGYCGLLNTRLDDGRLLVAGRRLTGYSWIEEVLAGVARKVPYNVEE 181 Query: 184 RLRELGGVFEGT-DNWQVFAIRDGQLITGQNPQSSERVAEML 224 ++ G ++E + + + DG+L+TGQNPQS++ AE + Sbjct: 182 EMKRRGALYERSLLPFTSKVVVDGRLVTGQNPQSAKATAEQV 223