BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0043.p (418 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value slr0447 [E] COG0683 ABC-type branched-chain amino acid transport... 368 e-101 all1951 [E] COG0683 ABC-type branched-chain amino acid transport... 356 5e-98 DRA0320 [E] COG0683 ABC-type branched-chain amino acid transport... 350 4e-96 BH0251 [E] COG0683 ABC-type branched-chain amino acid transport ... 337 3e-92 Cgl0906 [E] COG0683 ABC-type branched-chain amino acid transport... 323 6e-88 >slr0447 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Syn Synechocystis Length = 446 Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust. Identities = 204/415 (49%), Positives = 268/415 (64%), Gaps = 18/415 (4%) Query: 14 RRKILM----GLAAGAAAAALPGMASAQQYPTAKVN---TTKLAITDTEVTVGQLHSATG 66 RRK L+ L A A G PTA+ TT A T + VG LHS +G Sbjct: 7 RRKFLLYGSATLGASLLLKACGGGTEPTTEPTAEPTESPTTGTAPTGEPIKVGLLHSLSG 66 Query: 67 TMAISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGASDWPTFAEKAKKLLENDRVAA 126 TMAISET ++A LAI++INA GG+LGR I+ I+EDGASDWPTFAEKA KL++ D+V Sbjct: 67 TMAISETTVVEAAELAIEEINAAGGVLGRPIEAIKEDGASDWPTFAEKAAKLIDQDKVPV 126 Query: 127 VFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGLNWVAKE 186 VFGCWTSASRKAVLPVFE N +L+YP YEG E SKN+FYTG QQ+ ++W+ E Sbjct: 127 VFGCWTSASRKAVLPVFEAKNHMLWYPVQYEGQECSKNIFYTGAAPNQQIEPAVDWLL-E 185 Query: 187 KKAKTFFLVGSDYIWPRTSNKIARKHIENVLKGSVVGEEYYPLGNTQFGSLINKIKLKKP 246 K FFLVGSDY++PRT+N I ++ ++ G +GE+Y PLGNT+ +I KI+ P Sbjct: 186 NKGNKFFLVGSDYVFPRTANTIIKEQLK-AKGGETLGEDYLPLGNTEVTPIITKIREALP 244 Query: 247 D--VIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEGFFASMKY 304 D VIF + G SNVAF+KQ++AAG+T ++++SV E+E+ IG E + G FAS Y Sbjct: 245 DGGVIFNTLNGDSNVAFFKQIQAAGLTPDKYPVMSVSVAEEEVRQIGKEYLLGQFASWNY 304 Query: 305 FQSLDNANNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSF-----DVDKV 359 FQS+D N+KFVA FKAK+G + V D +AAY+ +LWKAAVE AG ++KV Sbjct: 305 FQSVDTPANQKFVAAFKAKYGEDRVTNDPMEAAYISVYLWKAAVEAAGDVGETPEGLEKV 364 Query: 360 VAASPGIELKTAPEGYVKVHENHHLWSKTRIGEAQKDGQFKVVYESE-LIEPNPF 413 AA+ G APEG V + NHH+ RIGE +GQF +V+ S+ ++P P+ Sbjct: 365 RAAAIGKTFD-APEGMVTMQPNHHISKTVRIGEVNDEGQFTIVWSSDGPVDPIPW 418 >all1951 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Nos Nostoc sp. PCC 7120 Length = 438 Score = 356 bits (914), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 192/408 (47%), Positives = 267/408 (65%), Gaps = 11/408 (2%) Query: 14 RRKILMGLAAGAAAAALPGMAS----AQQYPTAKVNTTKLAITD-TEVTVGQLHSATGTM 68 RR ++ G A ++ L A+ A P N + +A + + +G LHS +GTM Sbjct: 8 RRFLIYGSATIGSSILLKACANSTPNATNSPATSGNASPVAASGGNTIKIGILHSLSGTM 67 Query: 69 AISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGASDWPTFAEKAKKLLENDRVAAVF 128 +ISE + AE+LAI +INA GG+LG++I+ I EDGAS+W TF EKA KL++ D+VA VF Sbjct: 68 SISEKSVVDAEKLAIKEINAAGGVLGKQIEAIVEDGASNWDTFREKATKLIDQDKVAVVF 127 Query: 129 GCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGLNWVAKEKK 188 GCWTSASRK V PVFE + +L+YP YEG E SKN+FYTG QQ+ ++W+ K K Sbjct: 128 GCWTSASRKNVKPVFESKDHMLWYPVQYEGQECSKNIFYTGAAPNQQIEPSVDWLLKN-K 186 Query: 189 AKTFFLVGSDYIWPRTSNKIARKHIENVLKGSVVGEEYYPLGNTQFGSLINKIKLKKPD- 247 K FFLVGSDY++PRT+N I + +E L G VGE+Y PLGNT+ +I+KIK P+ Sbjct: 187 GKEFFLVGSDYVFPRTANTIIKAQLE-ALGGKTVGEDYLPLGNTEVTPIISKIKQALPNG 245 Query: 248 -VIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEGFFASMKYFQ 306 VI+ + G SNVAF+KQLK AG+T +++S+ E+E+ IG E ++G +A+ YFQ Sbjct: 246 GVIYNTLNGDSNVAFFKQLKGAGLTPDKHPSMSVSIAEEEVKAIGVEYLKGHYAAWNYFQ 305 Query: 307 SLDNANNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPGI 366 ++D NKKFV FK ++GA+ V D +AAY+ +LWK +VEKAGS D+ KV AA+ G Sbjct: 306 TVDTPANKKFVEAFKKEYGADRVTNDPMEAAYIAVYLWKQSVEKAGSPDLAKVRAAAYGQ 365 Query: 367 ELKTAPEGYVKVHENHHLWSKTRIGEAQKDGQFKVVYESEL-IEPNPF 413 + APEG V V+ NHH+ RIGE + DG F ++Y + +EP P+ Sbjct: 366 TID-APEGKVTVNTNHHISKIVRIGEVRDDGLFDIIYATPAPVEPVPW 412 >DRA0320 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Dra Deinococcus radiodurans Length = 390 Score = 350 bits (897), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 189/361 (52%), Positives = 242/361 (67%), Gaps = 4/361 (1%) Query: 56 VTVGQLHSATGTMAISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGASDWPTFAEKA 115 V VG LHS TGTMAISE A +LA+D+INA GG+LG+K+ I++EDGASDWPTFA KA Sbjct: 24 VKVGVLHSLTGTMAISELTVANATQLAVDEINAAGGVLGKKLVIVKEDGASDWPTFATKA 83 Query: 116 KKLLENDRVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQ 175 +KLL DRVAAVFG WTSASRKA+LPVFEK+ GLL+YP +EG E S N+ YTG + QQ Sbjct: 84 EKLLTQDRVAAVFGGWTSASRKAMLPVFEKNKGLLFYPVQFEGNECSPNIIYTGAQPNQQ 143 Query: 176 VLAGLNWVAKEKKAKTFFLVGSDYIWPRTSNKIARKHIENVLKGSVVGEEYYPLGNTQFG 235 L L W A K K FL+GSDY++PRT+N I +KHI + GEEY LG T+F Sbjct: 144 ALPALEW-ALSKGYKNIFLLGSDYVYPRTANLILKKHIA-ASGAKLAGEEYVALGGTEFS 201 Query: 236 SLINKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENV 295 S+INKIK KP VI + G SNV+F+KQ +AAG +A T +++ S+ E E IG + + Sbjct: 202 SVINKIKAAKPQVIINTLNGDSNVSFFKQYQAAGYSAATLPVISFSIAEQEAQAIGPQLL 261 Query: 296 EGFFASMKYFQSLDNANNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFD 355 +G +A+ YFQSL A NKKFVA +K K+GA +V+ D AYL +LWKAAVEKA SFD Sbjct: 262 QGQYATWNYFQSLPGAANKKFVAAYKKKYGAGAVVTDPMAHAYLDVYLWKAAVEKAKSFD 321 Query: 356 VDKVVAASPGIELKTAPEGYVKVHENHHLWSKTRIGEAQKDGQFKVVYESE-LIEPNPFP 414 V A G+ L + P G V V ++ L G++ GQFK V +S +++P P+ Sbjct: 322 PVAVRKAIVGVSLNS-PLGKVTVDKSGSLTQGVYTGQSGAGGQFKTVAQSRGVVQPQPYD 380 Query: 415 K 415 K Sbjct: 381 K 381 >BH0251 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Bha Bacillus halodurans Length = 419 Score = 337 bits (865), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 173/374 (46%), Positives = 248/374 (66%), Gaps = 5/374 (1%) Query: 47 TKLAITDTEVTVGQLHSATGTMAISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGAS 106 T++ + ++ VG LHS +GTMA+SET AE LAI++IN GG+LG+++ I EDGAS Sbjct: 37 TEVEVGSDQIAVGILHSLSGTMAMSETSVRDAELLAIEEINEAGGVLGKELVPIIEDGAS 96 Query: 107 DWPTFAEKAKKLLENDRVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVF 166 + FAE+A KLL+ D VA +FG WTSASRKA+LPV E++NGLL+YP YEG+E S N+F Sbjct: 97 EPNIFAERATKLLQQDEVAVIFGGWTSASRKAMLPVVEENNGLLFYPVQYEGMEASPNIF 156 Query: 167 YTGQEATQQVLAGLNWVAKEKKAKTFFLVGSDYIWPRTSNKIARKHIENVLKGSVVGEEY 226 Y G QQ++ + W+ E + FFL+GSDY++PR +N I + +E+ ++V E+Y Sbjct: 157 YAGAAPNQQIVPAVEWLL-ENRGTEFFLLGSDYVFPRLANAIIKAQLES-HGATLVDEQY 214 Query: 227 YPLGNTQFGSLINKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDE 286 PLG+T + ++I++I+ +P VIF + G SNVAF+KQL AG+TA ++++SV E+E Sbjct: 215 TPLGHTDYNTIISRIRESEPTVIFNTLNGDSNVAFFKQLADAGITADDVTVMSVSVAEEE 274 Query: 287 MLGIGGENVEGFFASMKYFQSLDNANNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKA 346 + GIG + + G AS YFQ+ D N FV + FG + V GD +A YL LW Sbjct: 275 IRGIGADVLAGHLASWNYFQTTDTPENDTFVTAYIKSFGDDRVTGDPIEAGYLMVHLWAQ 334 Query: 347 AVEKAGSFDVDKVVAASPGIELKTAPEGYVKVH-ENHHLWSKTRIGEAQKDGQFKVVYES 405 AVE AG+ D++ V A+ IE +AP G VKV +N HL+ RIGE Q DGQF+ V+ S Sbjct: 335 AVEAAGTTDIEAVREAASTIEF-SAPGGLVKVDGDNQHLYKTVRIGEVQADGQFEEVWNS 393 Query: 406 -ELIEPNPFPKGYQ 418 E ++P+PF + Y+ Sbjct: 394 GEPVKPDPFLEDYE 407 >Cgl0906 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Cgl Corynebacterium glutamicum Length = 423 Score = 323 bits (827), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 160/366 (43%), Positives = 243/366 (66%), Gaps = 7/366 (1%) Query: 56 VTVGQLHSATGTMAISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGASDWPTFAEKA 115 + +G ++S +GTMAISET Q+ +A D+INA GG+LG++++I +EDGAS+ TFAE++ Sbjct: 53 IKIGFINSLSGTMAISETTVNQSLHMAADEINAAGGVLGKQLEISEEDGASEPATFAERS 112 Query: 116 KKLLENDRVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQ 175 ++L++ + VAAVFG WTSASRKA+LPVFE +N LL+YP YEG+E S N+FYTG QQ Sbjct: 113 QRLIQQECVAAVFGGWTSASRKAMLPVFEGNNSLLFYPVQYEGMESSPNIFYTGATTNQQ 172 Query: 176 VLAGLNWVAKEKKAKTFFLVGSDYIWPRTSNKIARKHIE-NVLKGSVVGEEYYPLGNTQF 234 ++ L+++ +E FLVGSDY++PRT+N I + + E N ++ +VGE+Y PLG+T F Sbjct: 173 IIPALDYL-RENGLNRLFLVGSDYVFPRTANSIIKDYAEANGME--IVGEDYAPLGSTDF 229 Query: 235 GSLINKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGEN 294 ++ N+++ D +F + G SNVAF++Q + G A T ++++S+ E+E+ GIG N Sbjct: 230 TTIANRMRDSNADAVFNTLNGDSNVAFFRQYNSLGFNADTLPVMSVSIAEEEVGGIGTAN 289 Query: 295 VEGFFASMKYFQSLDNANNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSF 354 +EG + Y+Q++D N+ FV FK +G + V D +AAY +LWK VEKA SF Sbjct: 290 IEGQLVAWDYYQTIDTPENETFVENFKDLYGQDKVTSDPMEAAYTSLYLWKEMVEKADSF 349 Query: 355 DVDKVVAASPGIELKTAPEGYVKVH-ENHHLWSKTRIGEAQKDGQFKVVYESEL-IEPNP 412 DV + AA+ G APEG V V +NHH+ RIG + DG ++E++ ++P+P Sbjct: 350 DVAAIQAAADGTTFD-APEGTVVVDGDNHHISKTPRIGRIRPDGLIDTIWETDSPVDPDP 408 Query: 413 FPKGYQ 418 + Y Sbjct: 409 YLSSYD 414