BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0028.0317.p (281 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1132 [O] COG1281 Disulfide bond chaperones of the HSP33 famil... 320 3e-87 PA5193 [O] COG1281 Disulfide bond chaperones of the HSP33 family... 220 3e-57 NMA0441 [O] COG1281 Disulfide bond chaperones of the HSP33 famil... 208 9e-54 NMB2000 [O] COG1281 Disulfide bond chaperones of the HSP33 famil... 207 3e-53 VC2736 [O] COG1281 Disulfide bond chaperones of the HSP33 family... 199 6e-51 >RSc1132 [O] COG1281 Disulfide bond chaperones of the HSP33 family Rso Ralstonia solanacearum Length = 338 Score = 320 bits (819), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 174/310 (56%), Positives = 220/310 (70%), Gaps = 29/310 (9%) Query: 1 VQARRDYPVAVRTLLGEMLAASALLSANLKFNGMIVMQIHGDGPVKLLVVECDSELQLRA 60 V RR YP VRTLLG M+AA+ALLSANLKFNG ++MQ+HGDGP+++LVVEC+S+L +RA Sbjct: 29 VLRRRHYPAPVRTLLGGMMAAAALLSANLKFNGALIMQLHGDGPLRMLVVECNSDLSMRA 88 Query: 61 TAKLADDAEIADDATLTDLVNANGNGRFVITLDPKDKLPGQQAYQGVVPLDGE-----SV 115 TAKL + A+IADDATL LVN +G+GRF ITLDP+DKLPGQQ YQG+VPL E S+ Sbjct: 89 TAKLVEGAQIADDATLASLVNQHGHGRFAITLDPQDKLPGQQPYQGIVPLSDEHGPLTSM 148 Query: 116 ATVIENYMLRSEQLDTKLWLAADEKVSRGLLLQKLPSIGG-----------NAAPTVKPE 164 V+E+YM SEQLDT+LWLAAD+K++ G+LLQ+LPS GG T +P Sbjct: 149 TAVLEHYMQTSEQLDTRLWLAADDKIASGMLLQRLPSYGGAMEGHPGHGPAEVGETGQPL 208 Query: 165 GE------LEDWNHMVMLGDTLKREELLSTDIATLMHRLFWEQT----IRVFDPVHPQFH 214 E L+ W + LG TL+R+ELL + TL+ RL+WE+ IR+F+PV P+F Sbjct: 209 REDVHGQDLDTWERVCQLGATLRRDELLEQPVDTLIKRLYWEEMEHAGIRMFEPVLPRFR 268 Query: 215 CSCSREKVGNMLKMLGQEEVAEALSQM-EKLAIDCDFCGQHYEFDAVDCAQLFVAD--VG 271 CSC+R +VG ML+ LGQEE+ + L + K+ IDC+FCGQHY FDAVDCAQLF D V Sbjct: 269 CSCTRLRVGAMLRTLGQEEIDDILQERGGKVEIDCEFCGQHYAFDAVDCAQLFAQDTVVQ 328 Query: 272 GASEASDARH 281 G ASD RH Sbjct: 329 GVQSASDQRH 338 >PA5193 [O] COG1281 Disulfide bond chaperones of the HSP33 family Pae Pseudomonas aeruginosa Length = 297 Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 124/282 (43%), Positives = 171/282 (60%), Gaps = 16/282 (5%) Query: 1 VQARRDYPVAVRTLLGEMLAASALLSANLKFNGMIVMQIHGDGPVKLLVVECDSELQLRA 60 V A+ YP V LLGEMLAA++LL LKF+G++V+Q G V LL+VEC S+ Q+R Sbjct: 31 VLAKHPYPEPVAQLLGEMLAAASLLCGTLKFDGLLVLQARSSGAVPLLMVECSSDRQVRG 90 Query: 61 TAKLADDAEIADDATLTDLVNANGNGRFVITLDPKDKLPGQQAYQGVVPLDGESVATVIE 120 A+ + ++ I DA + +L+ G +T+DP + GQ+ YQG+V L+G ++A + Sbjct: 91 LARYSAES-IGADAGMQELMP---EGVLTLTVDP---VKGQR-YQGIVALEGVNLAECLS 142 Query: 121 NYMLRSEQLDTKLWLAADEKVSRGLLLQKLPSIGGNAAPTVKPEGELEDWNHMVMLGDTL 180 NY SEQL T+ WL A+ + +RGLLLQ+LP A PE W H+ L DTL Sbjct: 143 NYFASSEQLPTRFWLNANGRRARGLLLQQLP-----ADRLKDPEAREASWQHLTTLADTL 197 Query: 181 KREELLSTDIATLMHRLFWEQTIRVFDPVHPQFHCSCSREKVGNMLKMLGQEEVAEALSQ 240 EELL+ D T++HRL+ E+T+R+F+P FHCSCSRE+ N L LGQ + L + Sbjct: 198 TAEELLALDNETVLHRLYHEETVRLFEPQPLVFHCSCSRERSANALVSLGQADCERLLEE 257 Query: 241 ME-KLAIDCDFCGQHYEFDAVDCAQLFVADVGGASEASDARH 281 E ++IDC FC Q Y FDA D AQLF G+ S+ RH Sbjct: 258 EEGSISIDCQFCNQRYLFDASDVAQLFAG--AGSQGPSETRH 297 >NMA0441 [O] COG1281 Disulfide bond chaperones of the HSP33 family NmA Neisseria meningitidis Z2491 Length = 328 Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 122/273 (44%), Positives = 167/273 (61%), Gaps = 16/273 (5%) Query: 4 RRDYPVAVRTLLGEMLAASALLSANLKFNGMIVMQIHGDGPVKLLVVECDSELQLRATAK 63 +++YP A+R LGE+LAA LLS NLK G +++Q+ G G +K+LV E S+ +RATA+ Sbjct: 65 QKNYPAAIRRALGELLAAGVLLSGNLKNEGTLIVQVQGQGRLKMLVAEATSDRTVRATAR 124 Query: 64 LADDAEIADDATLTDLVNANGNGRFVITLDPKDKLPGQQAYQGVVPLDGESVATVIENYM 123 + AEIADD +L DL+ G FV+TL PKD P +QGVVPL+G+ +A ++ NYM Sbjct: 125 WDETAEIADDESLGDLLGEGGV--FVLTLQPKDGEP----WQGVVPLEGDGIAQMLVNYM 178 Query: 124 LRSEQLDTKLWLAADEKVSRGLLLQKLPSIGGNAAPTVKPEGELEDWNHMVMLGDTLKRE 183 RSEQLDT + L+A ++ + GLL+Q+LP V E E W H+ L TL E Sbjct: 179 KRSEQLDTHIVLSASDEAAGGLLVQRLPE-------EVLDE---EAWEHVSTLARTLTAE 228 Query: 184 ELLSTDIATLMHRLFWEQTIRVFDPVHPQFHCSCSREKVGNMLKMLGQEEVAEALSQMEK 243 EL D +++RLF E RVF+P +F C+CSR KV +ML MLG EEV + + Sbjct: 229 ELAGLDAQHVLYRLFHETPPRVFEPETFEFSCTCSRGKVSDMLLMLGGEEVGGVVVEQGS 288 Query: 244 LAIDCDFCGQHYEFDAVDCAQLFVADVGGASEA 276 + +DCDFC Y FD D LF DV G ++ Sbjct: 289 IEVDCDFCHSKYVFDETDVNALFGEDVVGVAKG 321 >NMB2000 [O] COG1281 Disulfide bond chaperones of the HSP33 family Nme Neisseria meningitidis MC58 Length = 302 Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 122/273 (44%), Positives = 166/273 (60%), Gaps = 16/273 (5%) Query: 4 RRDYPVAVRTLLGEMLAASALLSANLKFNGMIVMQIHGDGPVKLLVVECDSELQLRATAK 63 +++YP A+R LGE+LAA LLS NLK G +++Q+ G G +K+LV E S+ +RATA+ Sbjct: 39 QKNYPAAIRRALGELLAAGVLLSGNLKNEGTLIVQVQGRGRLKMLVAEAASDRTVRATAR 98 Query: 64 LADDAEIADDATLTDLVNANGNGRFVITLDPKDKLPGQQAYQGVVPLDGESVATVIENYM 123 + AEIADD +L DL+ G FV+TL PKD P +QGVVPL+G +A ++ NYM Sbjct: 99 WDETAEIADDESLGDLLGEGGV--FVLTLQPKDGEP----WQGVVPLEGGGIAQMLVNYM 152 Query: 124 LRSEQLDTKLWLAADEKVSRGLLLQKLPSIGGNAAPTVKPEGELEDWNHMVMLGDTLKRE 183 RSEQLDT + L+A ++ + GLL+Q+LP V E E W H+ L TL E Sbjct: 153 KRSEQLDTHIVLSASDEAAGGLLVQRLPE-------EVLDE---EAWEHVSTLARTLTAE 202 Query: 184 ELLSTDIATLMHRLFWEQTIRVFDPVHPQFHCSCSREKVGNMLKMLGQEEVAEALSQMEK 243 EL D +++RLF E RVF+P +F C+CSR KV +ML MLG EEV + + Sbjct: 203 ELAGLDAQHVLYRLFHETPPRVFEPETFEFSCTCSRGKVSDMLLMLGGEEVGGVVVEQGS 262 Query: 244 LAIDCDFCGQHYEFDAVDCAQLFVADVGGASEA 276 + +DCDFC Y FD D LF DV G ++ Sbjct: 263 IEVDCDFCHSKYVFDETDVNALFGEDVVGVAKG 295 >VC2736 [O] COG1281 Disulfide bond chaperones of the HSP33 family Vch Vibrio cholerae Length = 296 Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 105/276 (38%), Positives = 166/276 (60%), Gaps = 23/276 (8%) Query: 3 ARRDYPVAVRTLLGEMLAASALLSANLKFNGMIVMQIHGDGPVKLLVVECDSELQLRATA 62 + ++YP AV+ L+GE+L A++LL+A LKF G I +Q+ G+GPV L+V+ D+ Q+R A Sbjct: 37 SSQEYPAAVQHLIGELLVATSLLTATLKFEGSITLQLQGNGPVSLVVINGDNNQQVRGVA 96 Query: 63 KLADDAEIADDATLTDLVNANGNGRFVITLDPKDKLPGQQAYQGVVPLDGESVATVIENY 122 + D IADDA+L D++ G G VIT++PK + YQGVV L+G+++A V+E Y Sbjct: 97 RWKGD--IADDASLHDML---GKGHLVITIEPKQG----ERYQGVVGLEGDTLAQVLEGY 147 Query: 123 MLRSEQLDTKLWLAADEK----VSRGLLLQKLPSIGGNAAPTVKPEGELEDWNHMVMLGD 178 RSEQL T+LW+ + + G+LLQ +P G+A ED+ H+ L + Sbjct: 148 FERSEQLKTRLWIRVGKHDGKACAAGMLLQIVPDGKGSA----------EDFEHLEQLTN 197 Query: 179 TLKREELLSTDIATLMHRLFWEQTIRVFDPVHPQFHCSCSREKVGNMLKMLGQEEVAEAL 238 T+K EEL + L++RL+ ++T+++F P F C CSRE+ + + +EE+ + L Sbjct: 198 TIKDEELFALPAEELLYRLYNQETVQLFTPQQISFRCGCSRERSAAAIVTVAREEINDIL 257 Query: 239 SQMEKLAIDCDFCGQHYEFDAVDCAQLFVADVGGAS 274 +Q +A+ CD+CG Y FD+ A+L+ S Sbjct: 258 AQDGAVALHCDYCGTTYSFDSAQVAELYAPSSANGS 293