BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0028.0252.p         (141 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA2801 [R] COG0824 Predicted thioesterase Pae Pseudomonas aerugi...   105   3e-23
Rv0163 [R] COG0824 Predicted thioesterase Mtu Mycobacterium tube...    68   5e-12
MT0172 [R] COG0824 Predicted thioesterase MtC Mycobacterium tube...    68   7e-12
VNG1407C [R] COG0824 Predicted thioesterase Hbs Halobacterium sp...    63   2e-10
PA5185 [R] COG0824 Predicted thioesterase Pae Pseudomonas aerugi...    60   1e-09

>PA2801 [R] COG0824 Predicted thioesterase Pae Pseudomonas aeruginosa
          Length = 134

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 78/124 (62%)

Query: 12  LYVSQQRIRWGDMDAFGHVNNTLYFRFMEQCRIEWLEEVFGPTIAGEEGPVIVNAHCNFR 71
           L+ +   +RWGDMD++GHVNNTLYF+++E+ R+ W E +        EGPV++ +   + 
Sbjct: 7   LHTAHIPVRWGDMDSYGHVNNTLYFQYLEEARVAWFETLGIDLEGAAEGPVVLQSLHTYL 66

Query: 72  RQMKYPASILVQMGAGHLGRTSVETTYVIRDAADEQIIYADGAAKIVWVDFKKEKSTALP 131
           + + +PA+++V++ AG LG +S+   + +    D Q  Y +G  K+VWV   + +ST +P
Sbjct: 67  KPVVHPATVVVELYAGRLGTSSLVLEHRLHTLEDPQGTYGEGHCKLVWVRHAENRSTPVP 126

Query: 132 EKLR 135
           + +R
Sbjct: 127 DSIR 130


>Rv0163 [R] COG0824 Predicted thioesterase Mtu Mycobacterium tuberculosis
           H37Rv
          Length = 151

 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 8/126 (6%)

Query: 20  RWGDMDAFGHVNNTLYFRFMEQCRIEWLEEVFG--PTIAGEEGPVIVNAHCNFRRQMKYP 77
           RW D D FGH+NN +Y++  +     W+    G  P      G ++  + C +  ++++P
Sbjct: 24  RWADNDMFGHLNNAVYYQLFDTAINAWINTSTGVDPLAMPVLG-IVAESGCRYFSELRFP 82

Query: 78  ASILVQMGAGHLGRTSVETTY---VIRDAADEQIIYADGAAKIVWVDFKKEKSTALPEKL 134
            S++V +    LGR+SV  TY   V ++  D  +I A G    V+VD    +   +PE +
Sbjct: 83  ESLMVGLAVTRLGRSSV--TYRLGVFKEPDDAGVITALGHWVHVYVDRTSRRPVPIPEAI 140

Query: 135 RQLLTS 140
           R LL++
Sbjct: 141 RSLLST 146


>MT0172 [R] COG0824 Predicted thioesterase MtC Mycobacterium tuberculosis
           CDC1551
          Length = 151

 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 8/126 (6%)

Query: 20  RWGDMDAFGHVNNTLYFRFMEQCRIEWLEEVFG--PTIAGEEGPVIVNAHCNFRRQMKYP 77
           RW D D FGH+NN +Y++  +     W+    G  P      G ++  + C +  ++++P
Sbjct: 24  RWADNDMFGHLNNAVYYQLFDTAINAWINTSTGVDPLAMPVLG-IVAESGCRYFSELRFP 82

Query: 78  ASILVQMGAGHLGRTSVETTY---VIRDAADEQIIYADGAAKIVWVDFKKEKSTALPEKL 134
            S++V +    LGR+SV  TY   V ++  D  +I A G    V+VD    +   +PE +
Sbjct: 83  ESLMVGVAVTRLGRSSV--TYRLGVFKEPDDAGVITALGHWVHVYVDRTSRRPVPIPEAI 140

Query: 135 RQLLTS 140
           R LL++
Sbjct: 141 RSLLST 146


>VNG1407C [R] COG0824 Predicted thioesterase Hbs Halobacterium sp. NRC-1
          Length = 132

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 8/125 (6%)

Query: 19  IRWGDMDAFGHVNNTLYFRFMEQCRIEWLEEVFG--PTIAGEEGPVIVNAHCNFRRQMKY 76
           +R+ D D  GHVNN +Y  +MEQ R  +L +  G  PT   +   V+VN   +F R +++
Sbjct: 12  VRYQDHDTMGHVNNAVYVTYMEQARFAYLTDGIGRAPT---DLDMVVVNLSVDFNRPVEF 68

Query: 77  PASILVQMGAGHLGRTSVETTYVIRDAADEQIIYADGAAKIVWVDFKKEKSTALPEKLRQ 136
             ++ V     H+G TS    Y +RD  D+ ++ A G    V +D    +  ++P+  R+
Sbjct: 69  ADTVTVGASITHVGDTSFTMAYEVRD--DDGVV-ATGETVQVALDPDTGQPRSVPDDWRR 125

Query: 137 LLTSL 141
            + ++
Sbjct: 126 AIDAI 130


>PA5185 [R] COG0824 Predicted thioesterase Pae Pseudomonas aeruginosa
          Length = 147

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 7/142 (4%)

Query: 6   ATASKPL---YVSQQRI--RWGDMDAFGHVNNTLYFRFMEQCRIEWLEEVFGPTI-AGEE 59
           ATA +PL   Y+  Q I  RW D D +GHVNN  Y+ F +     +L E  G  I  GE 
Sbjct: 2   ATAPRPLREQYLHFQPISTRWHDNDIYGHVNNVTYYAFFDTAVNTYLIERGGLDIQGGEV 61

Query: 60  GPVIVNAHCNFRRQMKYPASILVQMGAGHLGRTSVETTYVIRDAADEQIIYADGAAKIVW 119
             ++V++ C++   + +P  I + +    LG +SV+    +      +   A G    V+
Sbjct: 62  IGLVVSSSCDYFAPVAFPQRIEMGLRVARLGNSSVQYELALFLEGQREAC-AAGRFVHVF 120

Query: 120 VDFKKEKSTALPEKLRQLLTSL 141
           V+ +  +  A+P++LR  L +L
Sbjct: 121 VERRSSRPVAIPQELRDALAAL 142