BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0028.0233.p         (58 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VCA0301 [IQR] COG1028 Dehydrogenases with different specificitie...    67   1e-11
PA3128 [IQR] COG1028 Dehydrogenases with different specificities...    66   2e-11
mll4297 [IQR] COG1028 Dehydrogenases with different specificitie...    60   1e-09
RSc2504 [IQR] COG1028 Dehydrogenases with different specificitie...    59   2e-09

>VCA0301 [IQR] COG1028 Dehydrogenases with different specificities
          (related to short-chain alcohol dehydrogenases) Vch
          Vibrio cholerae
          Length = 250

 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 41/53 (77%)

Query: 4  KVIIVTGGSRGIGAATALLAGQRGYAVCVNYVSNREAAESVAGQIRAAGGRAI 56
          KV+++TGGSRGIGAATA L  Q G++VC+NY SN EAA ++  +I+A GG  I
Sbjct: 5  KVVVITGGSRGIGAATAKLFAQNGFSVCINYKSNAEAANTLVEEIKALGGHCI 57


>PA3128 [IQR] COG1028 Dehydrogenases with different specificities
          (related to short-chain alcohol dehydrogenases) Pae
          Pseudomonas aeruginosa
          Length = 248

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 42/53 (79%)

Query: 4  KVIIVTGGSRGIGAATALLAGQRGYAVCVNYVSNREAAESVAGQIRAAGGRAI 56
           V+++TG SRGIGAATALLA +RGYAV +NY+ NREAAE++  +I   GG A+
Sbjct: 3  NVMLITGASRGIGAATALLAAERGYAVVLNYLRNREAAEALRQRIERQGGEAL 55


>mll4297 [IQR] COG1028 Dehydrogenases with different specificities
          (related to short-chain alcohol dehydrogenases) Mlo
          Mesorhizobium loti
          Length = 251

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 39/53 (73%)

Query: 4  KVIIVTGGSRGIGAATALLAGQRGYAVCVNYVSNREAAESVAGQIRAAGGRAI 56
          KV++VTGGSRGIGAA   L  + GY V VNY SNR AA+++  +I+AAGG A 
Sbjct: 6  KVLLVTGGSRGIGAAVCRLGAKAGYRVAVNYASNRAAADALVAEIKAAGGDAF 58


>RSc2504 [IQR] COG1028 Dehydrogenases with different specificities
          (related to short-chain alcohol dehydrogenases) Rso
          Ralstonia solanacearum
          Length = 248

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 39/53 (73%)

Query: 4  KVIIVTGGSRGIGAATALLAGQRGYAVCVNYVSNREAAESVAGQIRAAGGRAI 56
          K I++TGGSRGIG ATA+L  +RG++V + Y  NR+AA+  AG +  AGGR +
Sbjct: 3  KTIVITGGSRGIGRATAVLCARRGWSVAIQYRGNRQAADETAGLVEQAGGRLL 55