BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0028.0214.p         (73 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0989 [KE] COG1167 Transcriptional regulators containing a DNA...    82   2e-16

>RSc0989 [KE] COG1167 Transcriptional regulators containing a DNA-binding
           HTH domain and an aminotransferase domain (MocR family)
           and their eukaryotic orthologs Rso Ralstonia
           solanacearum
          Length = 490

 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 47/65 (72%)

Query: 9   CGMFLWVDTGRDTNVMTEEAMEQGFLLAPGSLFSPAQLPSTRMRINVAGMSDPGIWRFLE 68
            GMF+W DTGRDTN +     E+G++ APGSLFSP+Q+PST MR N+A  +DP + RFL 
Sbjct: 425 AGMFIWADTGRDTNAIARAGHEEGYVFAPGSLFSPSQMPSTWMRFNIATSTDPEMLRFLA 484

Query: 69  KAMDR 73
             ++R
Sbjct: 485 DQLER 489