BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0028.0205.p         (72 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp1389 [R] COG2220 Predicted Zn-dependent hydrolases of the bet...    80   1e-15
YPO1228 [R] COG2220 Predicted Zn-dependent hydrolases of the bet...    73   2e-13
XF2024 [R] COG2220 Predicted Zn-dependent hydrolases of the beta...    69   3e-12
mlr4314 [R] COG2220 Predicted Zn-dependent hydrolases of the bet...    64   7e-11
PA3969 [R] COG2220 Predicted Zn-dependent hydrolases of the beta...    57   9e-09

>RSp1389 [R] COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase
           fold Rso Ralstonia solanacearum
          Length = 362

 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/71 (50%), Positives = 50/71 (70%)

Query: 1   MQNQHVDPAQAVLIHEDVRAKRSVAIHWGTFELADDPLDEPPKELAKALREAGLPQEQFV 60
           M+ QH+DPA+AV + +D+ A+ +V IHWGTF L D+PLD+P  +LA ALR   +  E+FV
Sbjct: 267 MKTQHIDPAEAVQVMQDIGARHAVGIHWGTFPLTDEPLDQPIADLANALRARDIDAERFV 326

Query: 61  ALKHGETLKLD 71
             +HGET   D
Sbjct: 327 LFRHGETRVWD 337


>YPO1228 [R] COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase
           fold Ype Yersinia pestis
          Length = 342

 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 50/71 (70%)

Query: 1   MQNQHVDPAQAVLIHEDVRAKRSVAIHWGTFELADDPLDEPPKELAKALREAGLPQEQFV 60
           MQ QH+DP Q+V + + +    ++ IHWG FELAD+PLDEPP++L +AL +AG+   +FV
Sbjct: 272 MQAQHMDPQQSVQLFQKLHQPVTIPIHWGVFELADEPLDEPPEQLQQALTDAGVAHNKFV 331

Query: 61  ALKHGETLKLD 71
            +K G  + L+
Sbjct: 332 PIKIGARIILE 342


>XF2024 [R] COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase
           fold Xfa Xylella fastidiosa 9a5c
          Length = 332

 Score = 68.9 bits (167), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 46/66 (69%)

Query: 1   MQNQHVDPAQAVLIHEDVRAKRSVAIHWGTFELADDPLDEPPKELAKALREAGLPQEQFV 60
           M NQH+D  +AV I  DV A +++ +HWGTF L D+ ++EPP  LA+AL+  G+P  +F+
Sbjct: 258 MHNQHIDAVEAVQIMCDVGAHQALGVHWGTFRLTDEAVEEPPTLLAQALQAKGIPATRFI 317

Query: 61  ALKHGE 66
           A+  G+
Sbjct: 318 AMTPGQ 323


>mlr4314 [R] COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase
           fold Mlo Mesorhizobium loti
          Length = 350

 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 44/67 (65%)

Query: 1   MQNQHVDPAQAVLIHEDVRAKRSVAIHWGTFELADDPLDEPPKELAKALREAGLPQEQFV 60
           M  QH +P +AV   +  +A  +   HWGTF L D+P+DEP ++LA+AL   GLPQE+F 
Sbjct: 275 MAPQHQNPREAVQGMKLCKAAFAAGCHWGTFHLTDEPMDEPVRKLAEALDAEGLPQERFR 334

Query: 61  ALKHGET 67
           AL+ GE 
Sbjct: 335 ALQPGEV 341


>PA3969 [R] COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase
           fold Pae Pseudomonas aeruginosa
          Length = 361

 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 43/70 (61%)

Query: 1   MQNQHVDPAQAVLIHEDVRAKRSVAIHWGTFELADDPLDEPPKELAKALREAGLPQEQFV 60
           M++ H++P  AV  H  ++A+ S+AIH+GTF L D+  D+PPK L  ALR  G+    F 
Sbjct: 273 MRDHHMNPDDAVQAHRTLQAQTSMAIHFGTFNLTDEQQDDPPKALQAALRSQGVDPATFG 332

Query: 61  ALKHGETLKL 70
             K GE  ++
Sbjct: 333 TPKPGEQWRV 342