BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0028.0172.p (280 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1384 [E] COG2362 D-aminopeptidase Rso Ralstonia solanacearum 327 2e-89 lin0201 [E] COG2362 D-aminopeptidase Lin Listeria innocua 123 4e-28 BS_dppA [E] COG2362 D-aminopeptidase Bsu Bacillus subtilis 123 5e-28 DR1843 [E] COG2362 D-aminopeptidase Dra Deinococcus radiodurans 117 3e-26 mll6661 Non COG 94 3e-19 >RSc1384 [E] COG2362 D-aminopeptidase Rso Ralstonia solanacearum Length = 271 Score = 327 bits (839), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 169/274 (61%), Positives = 195/274 (71%), Gaps = 5/274 (1%) Query: 7 ILVSVDIEGVAGVFHTEQTRAGNGEYERARRWMTEEANAVIRGALAAGATAIKVNDSHGG 66 IL+S DIEGVA VFH EQTRAGN EYERARRWMT EA+A +RGA GAT + VNDSHGG Sbjct: 3 ILISADIEGVANVFHPEQTRAGNAEYERARRWMTAEADAAVRGAFEGGATEVIVNDSHGG 62 Query: 67 FRNLLPDLLHPQARMVLGKPRVLGMMGGVDHDIDAVMLVGYHSRAQGRGILAHTTNSFAF 126 FRNL+PD + +AR VLGKPR LGMM GV+ DAV ++GYH+RA RG LAHT NSFAF Sbjct: 63 FRNLVPDWMDARARFVLGKPRHLGMMAGVE-GCDAVCMIGYHARAGSRGTLAHTINSFAF 121 Query: 127 ARVWLGGQELGEAGLYGALAAEHGVPVIFGSGDDAFIEENQPLFPHAIFAETKKAYGANS 186 ARVWL QELGEAGLYGALA E GVPV SGDD F+ E PL PH F +TK+A G N+ Sbjct: 122 ARVWLNEQELGEAGLYGALAGERGVPVAVASGDDVFVNETLPLLPHTTFVQTKQAEGMNA 181 Query: 187 GDSLTPQQSCVLLEERARQAVTALVANPAAMPVLPLRGPLRCRLQAQTVALTDLFSQLPI 246 G SL+ +Q+C + R AV MP L ++ P+ CRLQ QT AL DLF Q P Sbjct: 182 GMSLSSEQACDAILAAVRSAVQ---RGHFGMP-LRIQPPIVCRLQTQTPALADLFCQWPA 237 Query: 247 LERTDNVTVEFDAPTAEYAVRVLNSLSAMSAMLR 280 LER D + F A + E+AVR+LNSLSAMS MLR Sbjct: 238 LERVDGTLLRFAADSVEHAVRMLNSLSAMSFMLR 271 >lin0201 [E] COG2362 D-aminopeptidase Lin Listeria innocua Length = 272 Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 87/277 (31%), Positives = 136/277 (49%), Gaps = 20/277 (7%) Query: 6 NILVSVDIEGVAGVFHTEQTRAGNGEYERARRWMTEEANAVIRGALAAGATAIKVNDSHG 65 + +SVD+EG+ G+ + Y R ++ MTEE N V+ AL AG + VNDSH Sbjct: 2 KLWISVDMEGINGLPDDTFVDSSMRNYTRGQKIMTEETNWVVEEALKAGYDDVIVNDSHS 61 Query: 66 GFRNLLPDLLHPQARMVLGKPRVLGMMGGVDHDIDAVMLVGYHSRAQGRGILAHTTNSFA 125 N+L + LH +AR++ G + M+ G+D DA + +GYHSRA G+++H+ S Sbjct: 62 KMNNILIEDLHEEARLITGDVKPFSMVQGLDSSADAAVFIGYHSRAGQPGVMSHSMIS-G 120 Query: 126 FARVWLGGQELGEAGLYGALAAEHGVPVIFGSGDDAFIEENQPLFPHAIFAETKKAYGAN 185 ++ +GE GL +A +GVPVI SGDD E + L P A K+A + Sbjct: 121 VRNFYINDVVIGEFGLNAYVAGAYGVPVILVSGDDYIAREAKELIPGIETAVVKEAVSRS 180 Query: 186 SGDSLTPQQSCVLLEERARQAVTALVANPAAMPVLPLRGPLRCRL----QAQTVALTDLF 241 S + + ++ ++ E+ +L AA+ V P + L+ QA+ AL Sbjct: 181 SAVAFSKSKAEKIIREK---VALSLNHKQAAVLVPPEKTVLKIEFCNYGQAEWAAL---- 233 Query: 242 SQLPILERTDNVTVEFDAPTAEYAVRVLNSLSAMSAM 278 +P + D TV F+A +L + AM AM Sbjct: 234 --VPRTKIIDETTVVFEAED------ILEAYQAMVAM 262 >BS_dppA [E] COG2362 D-aminopeptidase Bsu Bacillus subtilis Length = 274 Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 77/255 (30%), Positives = 127/255 (49%), Gaps = 6/255 (2%) Query: 6 NILVSVDIEGVAGVFHTEQTRAGNGEYERARRWMTEEANAVIRGALAAGATAIKVNDSHG 65 + +SVD+EG++G+ +G YER R MTEEAN I A +G T + VNDSH Sbjct: 2 KLYMSVDMEGISGLPDDTFVDSGKRNYERGRLIMTEEANYCIAEAFNSGCTEVLVNDSHS 61 Query: 66 GFRNLLPDLLHPQARMVLGKPRVLGMMGGVDHDIDAVMLVGYHSRAQGRGILAHTTNSFA 125 NL+ + LHP+A ++ G + M+ G+D + +GYH+RA G+++H+ F Sbjct: 62 KMNNLMVEKLHPEADLISGDVKPFSMVEGLDDTFRGALFLGYHARASTPGVMSHSM-IFG 120 Query: 126 FARVWLGGQELGEAGLYGALAAEHGVPVIFGSGDDAFIEENQPLFPHAIFAETKKAYGAN 185 ++ + +GE GL +A + VPV+ +GDD +E + L P+ A K+ + Sbjct: 121 VRHFYINDRPVGELGLNAYVAGYYDVPVLMVAGDDRAAKEAEELIPNVTTAAVKQTISRS 180 Query: 186 SGDSLTPQQSCVLLEERARQAVTALVANPAAMPVLPLRGPLRCRLQAQTVALTDLFSQLP 245 + L+P + LL E+ AL P+ P P+ ++ + + +P Sbjct: 181 AVKCLSPAKRGRLLTEK---TAFALQNKDKVKPLTPPDRPV-LSIEFANYGQAEWANLMP 236 Query: 246 ILE-RTDNVTVEFDA 259 E +T TV+F A Sbjct: 237 GTEIKTGTTTVQFQA 251 >DR1843 [E] COG2362 D-aminopeptidase Dra Deinococcus radiodurans Length = 283 Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 99/281 (35%), Positives = 140/281 (49%), Gaps = 15/281 (5%) Query: 6 NILVSVDIEGVAGVFHTEQTR-------AGNGEYERARRWMTEEANAVIRGALAAGATAI 58 +++SVD+EGV GV Q EYE+AR MT EA A GA AAGA+ + Sbjct: 2 KVVISVDMEGVCGVASWVQVSPPEFGGLVNGAEYEKARVQMTREAAAAAEGAFAAGASDV 61 Query: 59 KVNDSHGGFRNLLPDLLHPQARMVLGKPRVLGMMGGVDHD-IDAVMLVGYHSRAQG-RGI 116 VNDSH RNLLP+LL + R G + L M+ GV + + A++LVG H+RA RG Sbjct: 62 LVNDSHDTMRNLLPELLPERVRYTTGNDKPLSMVQGVQEEGVGALLLVGSHARAGSMRGP 121 Query: 117 LAHTTNSFAFARVWLGGQELGEAGLYGALAAEHGVPVIFGSGDDAFIEENQPLFPHAI-F 175 LAHT N F V +GG + GE GL LA +GVPV F SGDD + E + + Sbjct: 122 LAHTWNGF-IRNVRIGGVDTGEYGLNALLAGHYGVPVAFASGDDVAMGEIRAELGEGVET 180 Query: 176 AETKKAYGANSGDSLTPQQSCVLLEERARQAVTALVANPAAMPVLPLRGPLRCRLQAQTV 235 K+ + + L P ++ R R A V A++ R P C+L Sbjct: 181 VAVKEGLSSFAAIHLHPAEAV----RRIRAGAEAGVRRAASLAPYTTRWPAPCQLSFDHQ 236 Query: 236 ALTDLFSQLPILERTDNVTVEFDAPTAEYAVRVLNSLSAMS 276 A D ++P + R D VTV +++ A + + L+ ++ Sbjct: 237 ARADACERVPGVTRVDAVTVGWESENAYHLFQTFRLLAKVA 277 >mll6661 Non COG Length = 265 Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 95/191 (49%), Gaps = 8/191 (4%) Query: 6 NILVSVDIEGVAGVFHTEQTRAGNGEYERARRWMTEEANAVIRGALAAGATAIKVNDSHG 65 + +S DIEG AG+ + ++ + GN +Y R +MT+E A GA AAGAT + V D+H Sbjct: 2 KVFISADIEGTAGITNWDEAKKGNPDYAEFREYMTDELVAACEGARAAGATEVVVKDAHS 61 Query: 66 GFRNLLPDLLHPQARMV---LGKPRVLGMMGGVDHDIDAVMLVGYHSRA-QGRGILAHTT 121 RNL+ L R+V G P + MM G+D A + GYH++A LAHT Sbjct: 62 TARNLILSKLPDYVRIVRGWSGHPDM--MMFGIDISFAAALYTGYHNKAGTDTNPLAHTL 119 Query: 122 NSFAFARVWLGGQELGEAGLYGALAAEHGVPVIFGSGDDAFIEENQPLFPHAIFAETKKA 181 +R+ + G+ E L AA + VP F SGD + + L P T + Sbjct: 120 TG-TVSRLLINGEVASEYTLNALCAARYRVPSAFLSGDAGMCADAKVLVPAIGTVATSEG 178 Query: 182 YGANSGDSLTP 192 +G + SLTP Sbjct: 179 FGPATS-SLTP 188