BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0028.0145.p (189 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1164 [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamas... 210 1e-54 RSc1165 [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamas... 206 3e-53 PM0943 [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase... 203 2e-52 ppiA [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) ... 199 4e-51 ZppiA [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase)... 199 4e-51 >RSc1164 [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Rso Ralstonia solanacearum Length = 179 Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 109/166 (65%), Positives = 127/166 (76%), Gaps = 8/166 (4%) Query: 32 RVLLKTSMGNITLELNPEKAPVSVDNFLKYVKKGQYNGTVFHRVINGFMIQGGGYD--QN 89 +V L T+ G+ITL L+ EKAP SV NF+ YVKKG YNGTVFHRVI GFMIQGGG++ + Sbjct: 14 QVKLHTNHGDITLALDAEKAPKSVANFVHYVKKGHYNGTVFHRVIKGFMIQGGGFEPGAD 73 Query: 90 MREKATDAPIKNEANNGLKNEVYTVAMARTSAPHSATAQFFINVADNRFLNY--PGQDGW 147 M++K TDAPI NEANNGLKNE ++AMART+ PHSATAQFFINV DN FLN+ P GW Sbjct: 74 MKQKPTDAPIDNEANNGLKNERGSIAMARTNDPHSATAQFFINVVDNDFLNHTSPTPQGW 133 Query: 148 GYAVFGKVIAGADVVDKIKQVRTG----AGDVPATPVVIESATLVK 189 GYAVFGKV G DVVDKI+ VRTG DVP VVIESA +++ Sbjct: 134 GYAVFGKVTEGLDVVDKIRAVRTGNRGYHQDVPMEDVVIESAEVIE 179 >RSc1165 [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Rso Ralstonia solanacearum Length = 190 Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 97/161 (60%), Positives = 125/161 (77%), Gaps = 4/161 (2%) Query: 32 RVLLKTSMGNITLELNPEKAPVSVDNFLKYVKKGQYNGTVFHRVINGFMIQGGGYDQNMR 91 RV KTSMG+ T+E+ P+KAP +V NFL+YVK G Y GT+FHRV++GFMIQGGG+ +M+ Sbjct: 28 RVQFKTSMGDFTVEVYPDKAPKTVANFLQYVKDGFYKGTIFHRVMDGFMIQGGGFTPDMK 87 Query: 92 EKATDAPIKNEANNGLKNEVYTVAMARTSAPHSATAQFFINVADNRFLNYPGQDGWGYAV 151 +K T AP++ E+ NGLKN+ YT+AMART P+SATAQF++NV +N LNYPGQDG+GY V Sbjct: 88 QKDTRAPVEIESKNGLKNDKYTIAMARTMDPNSATAQFYVNVVNNDMLNYPGQDGYGYTV 147 Query: 152 FGKVIAGADVVDKIKQVRTGAG----DVPATPVVIESATLV 188 FGKV+ G +DKIK V T + +VP TP+VIES TLV Sbjct: 148 FGKVVEGTATIDKIKGVETTSKLPHQNVPVTPIVIESVTLV 188 >PM0943 [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Pmu Pasteurella multocida Length = 183 Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 106/186 (56%), Positives = 126/186 (67%), Gaps = 10/186 (5%) Query: 8 LLRMAAAFSLSATLAAPALAADAPRVLLKTSMGNITLELNPEKAPVSVDNFLKYVKKGQY 67 +LR+ A LA A A V+L T+ G+I + L EKAP+S NFL+Y + G Y Sbjct: 1 MLRIITAL----LLAGVVCVAQAKNVVLHTNYGDIKMVLEEEKAPISTQNFLRYSQAGFY 56 Query: 68 NGTVFHRVINGFMIQGGGYDQNMREKATDAPIKNEANNGLKNEVYTVAMARTSAPHSATA 127 NGT+FHRVI GFMIQ GG++ M++K TDAPI NEANNGLKN TVAMARTS PHSATA Sbjct: 57 NGTIFHRVIPGFMIQAGGFEVGMKQKKTDAPITNEANNGLKNLRGTVAMARTSDPHSATA 116 Query: 128 QFFINVADNRFLNYPG--QDGWGYAVFGKVIAGADVVDKIKQVRTGAG----DVPATPVV 181 QFFIN DN FLN+ Q GWGYAVF V+AG DVVD+I QV T DVP PV+ Sbjct: 117 QFFINTVDNDFLNFSAETQKGWGYAVFANVVAGMDVVDRISQVDTERSGFHRDVPKAPVI 176 Query: 182 IESATL 187 I+S T+ Sbjct: 177 IKSVTI 182 >ppiA [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Eco Escherichia coli K12 Length = 190 Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 108/188 (57%), Positives = 131/188 (69%), Gaps = 5/188 (2%) Query: 5 RRHLLRMAAAFSLSATLAAPALAADAPRVLLKTSMGNITLELNPEKAPVSVDNFLKYVKK 64 + L MAA F+LSA A A P VLL TS GNI LEL+ +KAPVSV NF+ YV Sbjct: 3 KSTLAAMAAVFALSALSPAAMAAKGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNS 62 Query: 65 GQYNGTVFHRVINGFMIQGGGYDQNMREKATDAPIKNEANNGLKNEVYTVAMARTSAPHS 124 G YN T FHRVI GFMIQGGG+ + M++K + PIKNEA+NGL+N T+AMART+ S Sbjct: 63 GFYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADKDS 122 Query: 125 ATAQFFINVADNRFLNYPGQDGWGYAVFGKVIAGADVVDKIKQVRTGA----GDVPATPV 180 AT+QFFINVADN FL++ GQ +GYAVFGKV+ G DV DKI QV T +VP+ PV Sbjct: 123 ATSQFFINVADNAFLDH-GQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPV 181 Query: 181 VIESATLV 188 VI SA ++ Sbjct: 182 VILSAKVL 189 >ZppiA [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family EcZ Escherichia coli O157:H7 EDL933 Length = 190 Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 108/188 (57%), Positives = 131/188 (69%), Gaps = 5/188 (2%) Query: 5 RRHLLRMAAAFSLSATLAAPALAADAPRVLLKTSMGNITLELNPEKAPVSVDNFLKYVKK 64 + L MAA F+LSA A A P VLL TS GNI LEL+ +KAPVSV NF+ YV Sbjct: 3 KSTLAAMAAVFALSALSPAAMAAKGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNS 62 Query: 65 GQYNGTVFHRVINGFMIQGGGYDQNMREKATDAPIKNEANNGLKNEVYTVAMARTSAPHS 124 G YN T FHRVI GFMIQGGG+ + M++K + PIKNEA+NGL+N T+AMART+ S Sbjct: 63 GFYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADKDS 122 Query: 125 ATAQFFINVADNRFLNYPGQDGWGYAVFGKVIAGADVVDKIKQVRTGA----GDVPATPV 180 AT+QFFINVADN FL++ GQ +GYAVFGKV+ G DV DKI QV T +VP+ PV Sbjct: 123 ATSQFFINVADNAFLDH-GQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPV 181 Query: 181 VIESATLV 188 VI SA ++ Sbjct: 182 VILSAKVL 189