BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0028.0137.p         (154 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1170 [D] COG0037 Predicted ATPase of the PP-loop superfamily ...    75   8e-14

>RSc1170 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated
           in cell cycle control Rso Ralstonia solanacearum
          Length = 462

 Score = 74.7 bits (182), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 75/144 (52%), Gaps = 12/144 (8%)

Query: 6   CVSHPDGEVHRYRERVFLA----PRRSLPDEGASLSLRWSGQAQVH---VPVFHGTLHFE 58
           CV  P  +V RYR + ++     P     D   ++S     +A+V    V  + G L F 
Sbjct: 304 CVRLPGAQVRRYRGQAWIEAAGQPGAGPADCPIAVSRFDPARAEVQRVDVAAWGGALLFS 363

Query: 59  PVSDGDARPGFDAAWLRAQSLLVCGRSGGERIKLAQNRPARSLKQQYQSADVPAWERPYL 118
           P        G DA  L+A  L +  R GGERI L    P+R+LKQ YQ A +PAW R  L
Sbjct: 364 PAQA----EGIDARILQA-PLSLAARRGGERIVLRPGGPSRALKQAYQEAGIPAWARARL 418

Query: 119 PLVWAGEDLLFAAGVGMDCAHFAQ 142
           PL++AGE L+FAAG+G D +  A 
Sbjct: 419 PLLYAGERLVFAAGLGPDRSAVAM 442