BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0028.0090.p         (84 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA3258_1 [T] COG2200 FOG Pae Pseudomonas aeruginosa                    58   6e-09

>PA3258_1 [T] COG2200 FOG Pae Pseudomonas aeruginosa
          Length = 270

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 34/49 (69%)

Query: 35 LSLLHEIIAQRKLSALFQPIVRMRNGEILGYEGLIRGPSNTPLHSPLAL 83
          LS L  I+A   L  LFQPI+ +    ++GYE L RGPSN+PLHSPLAL
Sbjct: 26 LSALDSILAHGDLHCLFQPILSLSERRLVGYEALTRGPSNSPLHSPLAL 74