BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0028.0078.p (323 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1050 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase II... 490 e-138 NMB1916 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase II... 389 e-108 NMA0538 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase II... 370 e-102 fabH [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III E... 328 9e-90 ZfabH [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III ... 328 9e-90 >RSc1050 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III Rso Ralstonia solanacearum Length = 326 Score = 490 bits (1262), Expect = e-138, Method: Compositional matrix adjust. Identities = 237/328 (72%), Positives = 278/328 (84%), Gaps = 7/328 (2%) Query: 1 MTTYSKIVGTGSYLPAKRVTNHELAAQLAEQGIETSDEWIVTRSGISARHYAEPGQLSSD 60 MT Y++I+GTGSYLP KRVTNHELAAQLAEQGIETSDEWIVTRSGI ARHYAEP SD Sbjct: 1 MTRYARIIGTGSYLPPKRVTNHELAAQLAEQGIETSDEWIVTRSGIRARHYAEPDVTCSD 60 Query: 61 LALQAAQRALEAAGMQANDIDLIIMATSTPDHLGGFPSTACVVQRKLGITNGAPAMDVQA 120 LA +AA+RA+EAAG+ +IDLI++ATSTPD + FPS AC+VQ+KLG++N A D+QA Sbjct: 61 LAAKAAERAIEAAGIDRAEIDLILVATSTPDFV--FPSAACLVQQKLGLSNHCAAFDLQA 118 Query: 121 VCSGFVYAMSVADSFIKSGAHKNVLVIGAEVFSRILDFKDRTTCVLFGDGAGAVIMSASQ 180 VCSGFVY ++ AD FI++G ++N LVIGAEVFSRILDF DRTTCVLFGDGAGAV++ AS Sbjct: 119 VCSGFVYGLATADKFIRAGGYRNALVIGAEVFSRILDFNDRTTCVLFGDGAGAVVLQASD 178 Query: 181 EPGVLATKLHADGSHGHILCVPGSIDNGAVAGSAYLYMDGPAVFKLAVSLLDKVAREALE 240 EPG+L+T LHADGSH ILCVPG++ GA+ GSA+LYMDG AVFKLAV++LDKVAREAL Sbjct: 179 EPGILSTALHADGSHADILCVPGNVAGGAIKGSAFLYMDGQAVFKLAVNVLDKVAREALA 238 Query: 241 AAKMQSTX-----PHQANIRIMQGTAKKMGLPLEKMVVTVAEHGNTSAASIPLALDQAVR 295 A+++S+ PHQANIRIMQGTAKK+GLP E+MVVTV EHGNTSAASIPLALD AVR Sbjct: 239 LAEVESSQIDWLIPHQANIRIMQGTAKKLGLPGERMVVTVDEHGNTSAASIPLALDAAVR 298 Query: 296 DGRIRPGHTVMMEGVGGGFTWGAVLARM 323 DGRI+ GH V++EGVGGGFTWGA L R Sbjct: 299 DGRIQKGHHVLLEGVGGGFTWGAALLRF 326 >NMB1916 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III Nme Neisseria meningitidis MC58 Length = 320 Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust. Identities = 190/322 (59%), Positives = 247/322 (76%), Gaps = 12/322 (3%) Query: 4 YSKIVGTGSYLPAKRVTNHELAAQLAEQGIETSDEWIVTRSGISARHYAEPGQLSSDLAL 63 Y+KI GTGSYLPA RV+N +LA Q ++TSDEWI R+GI RH A + +SDLA Sbjct: 3 YAKISGTGSYLPANRVSNDDLA-----QKVDTSDEWITARTGIKFRHIAAENEKTSDLAA 57 Query: 64 QAAQRALEAAGMQANDIDLIIMATSTPDHLGGFPSTACVVQRKLGITNGAPAMDVQAVCS 123 +AA RAL+AAG+ + +IDLII+AT+TPD FPSTA +VQ+KLGITNG PA DVQAVC+ Sbjct: 58 EAAHRALDAAGLDSGEIDLIIVATATPDMQ--FPSTATIVQQKLGITNGCPAFDVQAVCA 115 Query: 124 GFVYAMSVADSFIKSGAHKNVLVIGAEVFSRILDFKDRTTCVLFGDGAGAVIMSASQEPG 183 GF+YA++ A+++IKSG KN LVIGAE FSRI+D+ DRTTCVLFGDGAGAV++SAS PG Sbjct: 116 GFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFGDGAGAVVLSASDTPG 175 Query: 184 VLATKLHADGSHGHILCVPGSIDNGAVAGSAYLYMDGPAVFKLAVSLLDKVAREALE--- 240 ++ +KL ADG++ +L VPG I G V+GS Y+ MDGP VFK AV +L K+A + +E Sbjct: 176 IIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKFAVKMLSKIADDVIEEAG 235 Query: 241 --AAKMQSTXPHQANIRIMQGTAKKMGLPLEKMVVTVAEHGNTSAASIPLALDQAVRDGR 298 AA++ PHQAN RI++ TAK +GL ++K+V+TV +HGNTSAASIPLALD +R G+ Sbjct: 236 YTAAQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHGNTSAASIPLALDTGIRSGQ 295 Query: 299 IRPGHTVMMEGVGGGFTWGAVL 320 I+ G +++EG+GGGF WGAVL Sbjct: 296 IKRGQNLLLEGIGGGFAWGAVL 317 >NMA0538 [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III NmA Neisseria meningitidis Z2491 Length = 320 Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust. Identities = 191/322 (59%), Positives = 248/322 (77%), Gaps = 12/322 (3%) Query: 4 YSKIVGTGSYLPAKRVTNHELAAQLAEQGIETSDEWIVTRSGISARHYAEPGQLSSDLAL 63 Y+KI GTGSYLPA RV+N +LA Q ++TSDEWI R+GI RH A + +SDLA Sbjct: 3 YAKISGTGSYLPANRVSNDDLA-----QKVDTSDEWITARTGIKFRHIAAENEKTSDLAA 57 Query: 64 QAAQRALEAAGMQANDIDLIIMATSTPDHLGGFPSTACVVQRKLGITNGAPAMDVQAVCS 123 +AA+RAL+AAG+ N+IDLII+AT+TPD FPSTA +VQ+KLGITNG PA DVQAVC+ Sbjct: 58 EAARRALDAAGLNGNEIDLIIVATATPDMQ--FPSTATIVQQKLGITNGCPAFDVQAVCA 115 Query: 124 GFVYAMSVADSFIKSGAHKNVLVIGAEVFSRILDFKDRTTCVLFGDGAGAVIMSASQEPG 183 GF+YA++ A+++IKSG KN LVIGAE FSRI+D+ DRTTCVLFGDGAGAV++SAS PG Sbjct: 116 GFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFGDGAGAVVLSASDTPG 175 Query: 184 VLATKLHADGSHGHILCVPGSIDNGAVAGSAYLYMDGPAVFKLAVSLLDKVAREALE--- 240 ++ +KL ADG++ +L VPG I G V+GS Y+ MDGP VFK AV +L K+A + +E Sbjct: 176 IIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKFAVKMLSKIADDVIEEAG 235 Query: 241 --AAKMQSTXPHQANIRIMQGTAKKMGLPLEKMVVTVAEHGNTSAASIPLALDQAVRDGR 298 AA++ PHQAN RI++ TAK +GL ++K+V+TV +HGNTSAASIPLALD +R G+ Sbjct: 236 YTAAQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHGNTSAASIPLALDTGIRSGQ 295 Query: 299 IRPGHTVMMEGVGGGFTWGAVL 320 I+ G +++EG+GGGF WGAVL Sbjct: 296 IKRGQNLLLEGIGGGFAWGAVL 317 >fabH [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III Eco Escherichia coli K12 Length = 317 Score = 328 bits (841), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 164/325 (50%), Positives = 225/325 (69%), Gaps = 14/325 (4%) Query: 4 YSKIVGTGSYLPAKRVTNHELAAQLAEQGIETSDEWIVTRSGISARHYAEPGQLSSDLAL 63 Y+KI+GTGSYLP + TN +L E+ ++TSDEWIVTR+GI RH A P + S + Sbjct: 2 YTKIIGTGSYLPEQVRTNADL-----EKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGF 56 Query: 64 QAAQRALEAAGMQANDIDLIIMATSTPDHLGGFPSTACVVQRKLGITNGAPAMDVQAVCS 123 +AA RA+E AG++ + I LI++AT++ H FPS AC +Q LGI G PA DV A C+ Sbjct: 57 EAATRAIEMAGIEKDQIGLIVVATTSATH--AFPSAACQIQSMLGI-KGCPAFDVAAACA 113 Query: 124 GFVYAMSVADSFIKSGAHKNVLVIGAEVFSRILDFKDRTTCVLFGDGAGAVIMSASQEPG 183 GF YA+SVAD ++KSGA K LV+G++V +R D DR T ++FGDGAGA +++AS+EPG Sbjct: 114 GFTYALSVADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAASEEPG 173 Query: 184 VLATKLHADGSHGHILCVPGSIDNGAVAGSAYLYMDGPAVFKLAVSLLDKVAREALEAAK 243 +++T LHADGS+G +L +P + D S +L M G VFK+AV+ L + E L A Sbjct: 174 IISTHLHADGSYGELLTLPNA-DRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANN 232 Query: 244 MQSTX-----PHQANIRIMQGTAKKMGLPLEKMVVTVAEHGNTSAASIPLALDQAVRDGR 298 + + PHQAN+RI+ TAKK+G+ ++ +VVT+ HGNTSAAS+P ALD+AVRDGR Sbjct: 233 LDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGR 292 Query: 299 IRPGHTVMMEGVGGGFTWGAVLARM 323 I+PG V++E GGGFTWG+ L R Sbjct: 293 IKPGQLVLLEAFGGGFTWGSALVRF 317 >ZfabH [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III EcZ Escherichia coli O157:H7 EDL933 Length = 317 Score = 328 bits (841), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 164/325 (50%), Positives = 225/325 (69%), Gaps = 14/325 (4%) Query: 4 YSKIVGTGSYLPAKRVTNHELAAQLAEQGIETSDEWIVTRSGISARHYAEPGQLSSDLAL 63 Y+KI+GTGSYLP + TN +L E+ ++TSDEWIVTR+GI RH A P + S + Sbjct: 2 YTKIIGTGSYLPEQVRTNADL-----EKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGF 56 Query: 64 QAAQRALEAAGMQANDIDLIIMATSTPDHLGGFPSTACVVQRKLGITNGAPAMDVQAVCS 123 +AA RA+E AG++ + I LI++AT++ H FPS AC +Q LGI G PA DV A C+ Sbjct: 57 EAATRAIEMAGIEKDQIGLIVVATTSATH--AFPSAACQIQSMLGI-KGCPAFDVAAACA 113 Query: 124 GFVYAMSVADSFIKSGAHKNVLVIGAEVFSRILDFKDRTTCVLFGDGAGAVIMSASQEPG 183 GF YA+SVAD ++KSGA K LV+G++V +R D DR T ++FGDGAGA +++AS+EPG Sbjct: 114 GFTYALSVADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAASEEPG 173 Query: 184 VLATKLHADGSHGHILCVPGSIDNGAVAGSAYLYMDGPAVFKLAVSLLDKVAREALEAAK 243 +++T LHADGS+G +L +P + D S +L M G VFK+AV+ L + E L A Sbjct: 174 IISTHLHADGSYGELLTLPNA-DRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANN 232 Query: 244 MQSTX-----PHQANIRIMQGTAKKMGLPLEKMVVTVAEHGNTSAASIPLALDQAVRDGR 298 + + PHQAN+RI+ TAKK+G+ ++ +VVT+ HGNTSAAS+P ALD+AVRDGR Sbjct: 233 LDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGR 292 Query: 299 IRPGHTVMMEGVGGGFTWGAVLARM 323 I+PG V++E GGGFTWG+ L R Sbjct: 293 IKPGQLVLLEAFGGGFTWGSALVRF 317