BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0028.0046.p (207 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PH0487 [NT] COG1776 Chemotaxis protein CheC, inhibitor of MCP me... 70 5e-12 PAB1333 [NT] COG1776 Chemotaxis protein CheC, inhibitor of MCP m... 66 5e-11 MA3065 [NT] COG1776 Chemotaxis protein CheC, inhibitor of MCP me... 62 9e-10 CAC2219 [NT] COG1776 Chemotaxis protein CheC, inhibitor of MCP m... 62 1e-09 TM0904 [NT] COG1776 Chemotaxis protein CheC, inhibitor of MCP me... 59 9e-09 >PH0487 [NT] COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation Pho Pyrococcus horikoshii Length = 212 Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 96/196 (48%), Gaps = 5/196 (2%) Query: 4 LNEIERDALTEIFNVGAGRAAQSLSEIVGDEVRLSVPSVEVLRSGAIDEQVLPRTRGRFA 63 L+E+ + AL E FN+GA AA +LSE+ G EV +SVP ++++ + E V + Sbjct: 15 LDEMSKSALLETFNIGASHAATALSEMTGKEVNISVPDLKIIAIKNVPEVVGEDVK---V 71 Query: 64 TVSQNFDGPFDAEAVLLFTEDRALSIVRDMMGSQM-SLDELAEFEREAMCELGNIILNAC 122 V F + A + + AL + +MG+ + + E+ E + + E+GNI+++A Sbjct: 72 AVYIELGKDFSSHAFFIADYEDALRMFDIIMGNPLGTTKEMDEMVKSSFMEVGNILISAF 131 Query: 123 LSAMADMLEITLNSSLPQYLVSS-PDDISARLASAQGDESYVLVLHIDLVIEKHQTDGHL 181 +A+++ L IT+ + P + P + LA Y ++L ++ I + + H Sbjct: 132 ANALSEFLGITIEQTPPSLAIDFLPAILDFALADIGKYCDYTIILQTNIKISDVKFEEHF 191 Query: 182 IFLLSSSSLHALVEHV 197 + + ++E + Sbjct: 192 LLFPKPEDMKKILEKL 207 >PAB1333 [NT] COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation Pab Pyrococcus abyssi Length = 212 Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 5/199 (2%) Query: 1 VSILNEIERDALTEIFNVGAGRAAQSLSEIVGDEVRLSVPSVEVLRSGAIDEQVLPRTRG 60 V L+E + AL E FN+GA AA +LSE+ G EV +SVP ++V+ + E V + Sbjct: 12 VKNLDEFAKSALLETFNIGASHAATALSEMTGREVNISVPDLKVVEIKNVPEIVGEDVK- 70 Query: 61 RFATVSQNFDGPFDAEAVLLFTEDRALSIVRDMMGSQM-SLDELAEFEREAMCELGNIIL 119 V F + A D L + +MG+ + EL + + + E+GNI++ Sbjct: 71 --VVVYIELGKDFSSHAFFAADYDDVLRMFDVIMGNPPGTTTELDDMVKSSFMEMGNILI 128 Query: 120 NACLSAMADMLEITLNSSLPQYLVSS-PDDISARLASAQGDESYVLVLHIDLVIEKHQTD 178 +A +A++ L IT+ + P + P + LA Y ++L D+ I + + Sbjct: 129 SAFANALSQFLGITIEQTPPALTIDFLPAILDLALADIGKFCDYTIILQTDIKISGVEFE 188 Query: 179 GHLIFLLSSSSLHALVEHV 197 H + + ++E + Sbjct: 189 EHFLLFPKPEDMKKILEKL 207 >MA3065 [NT] COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation Mac Methanosarcina acetivorans str.C2A Length = 203 Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 3/143 (2%) Query: 4 LNEIERDALTEIFNVGAGRAAQSLSEIVGDEVRLSVPSVEVLRSGAIDEQVLPRTRGRFA 63 L+E+E D L E+ N+GAG AA SLS+++ +V LSVP V+V I + + Sbjct: 10 LSEVELDVLKELGNIGAGHAATSLSKLLNKDVYLSVPEVKVGEIKNISSEFIGEIVAGVI 69 Query: 64 TVSQNFDGPFDAEAVLLFTEDRALSIVRDMMGSQMSLDELAEFEREAMCELGNIILNACL 123 Q+ + ++F E A I D+ + LDE E + E+GNI+ ++ Sbjct: 70 IALQDLEEKKSGYLYIMFPEKSARKIAGDLFDME-ELDE--EMYASTIMEVGNILSSSFC 126 Query: 124 SAMADMLEITLNSSLPQYLVSSP 146 A AD ++I L S P + P Sbjct: 127 DATADFMDIILLPSPPSFAEDVP 149 >CAC2219 [NT] COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation Cac Clostridium acetobutylicum Length = 200 Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/199 (23%), Positives = 100/199 (50%), Gaps = 18/199 (9%) Query: 4 LNEIERDALTEIFNVGAGRAAQSLSEIVGDEVRLSVPSVEVLRSGAIDEQVLPRTRGRFA 63 L ++ DA+ E+ N+G+G AA +LS+++ ++ ++VP + ++ + ++ Sbjct: 6 LTPMQLDAIKEVVNIGSGNAATALSQLLNKKIDMTVPDINIVPFDTLFSEIGEEKVAVGV 65 Query: 64 TVSQNFDGPFDAEAVLLFTEDRALSIVRDMMGSQMSLDELAEFEREAMCELGNIILNACL 123 V D P + +F ++ A+ IV + G + D+L + +CE+GNII ++ + Sbjct: 66 VVRVLGDTP--GNILFVFEKETAVEIVETLTG--IKDDDLTDLSSSVLCEIGNIISSSYM 121 Query: 124 SAMADMLEITLNSSLPQYLVSSPDDISARLASA-----QGDESYVLVLHIDLVIEKHQTD 178 +A++ + + S+P + S D + A L ++ Q D++ VL ++ V + +T Sbjct: 122 NAISKFTNLVITPSVPAF---SYDMLGAILTTSFIEAGQCDDN---VLDLETVFLQDKTK 175 Query: 179 ---GHLIFLLSSSSLHALV 194 GH ++ SL ++ Sbjct: 176 NISGHFYYIPMPGSLEKIL 194 >TM0904 [NT] COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation Tma Thermotoga maritima Length = 205 Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 88/165 (53%), Gaps = 19/165 (11%) Query: 4 LNEIERDALTEIFNVGAGRAAQSLSEIVGDEVRLSVPSVEVLRSGAI------DEQVLPR 57 ++E ++D L EI N+GAG AA ++S ++ +V +SVP+VE++ + E+++ Sbjct: 3 ISERQKDLLKEIGNIGAGNAATAISYMINKKVEISVPNVEIVPISKVIFIAKDPEEIV-- 60 Query: 58 TRGRFATVSQNFDGPFDAEAVLLFTEDRALSIVRDMMGSQM--SLDELAEFEREAMCELG 115 G V+ + +G +VLL + + +++ + +L L EF A+ E+G Sbjct: 61 -VGVKMPVTGDIEG-----SVLLIMGTTVVKKILEILTGRAPDNLLNLDEFSASALREIG 114 Query: 116 NIILNACLSAMADMLEITLNSSLPQYLVSSPDDISARLASAQGDE 160 NI+ +SA+AD L +++ PQ ++ D ISA A A +E Sbjct: 115 NIMCGTYVSALADFLGFKIDTLPPQLVI---DMISAIFAEASIEE 156