BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0028.0036.p         (74 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1575 [J] COG0251 Putative translation initiation inhibitor, y...   108   3e-24
SMc00791 [J] COG0251 Putative translation initiation inhibitor, ...    96   2e-20
BMEII0278 [J] COG0251 Putative translation initiation inhibitor,...    93   1e-19
PA5303 [J] COG0251 Putative translation initiation inhibitor, yj...    91   6e-19
XF1711 [J] COG0251 Putative translation initiation inhibitor, yj...    90   1e-18

>RSc1575 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Rso Ralstonia solanacearum
          Length = 131

 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 49/74 (66%), Positives = 59/74 (79%)

Query: 1   VLGHIDRLLAEAGSDKTKILSCQIFLSDVKDFAGMNAVWDEWVAPGNAPPRATVEAKLAR 60
           VL  IDR+LA  GSDKT+IL CQIFL D+ +   MNAVWD+WVAPGNAPPRATVEA LA 
Sbjct: 57  VLATIDRVLAANGSDKTRILMCQIFLKDIAEIGAMNAVWDQWVAPGNAPPRATVEAALAN 116

Query: 61  PELLVEIIIVAAQK 74
           P+  +EI++ AA+K
Sbjct: 117 PKYRIEIVVTAARK 130


>SMc00791 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Sme Sinorhizobium meliloti
          Length = 114

 Score = 95.5 bits (236), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/71 (63%), Positives = 56/71 (78%)

Query: 2   LGHIDRLLAEAGSDKTKILSCQIFLSDVKDFAGMNAVWDEWVAPGNAPPRATVEAKLARP 61
           L  +DRLLA AG+DKT+ILS  ++L+D+ DFA MN+VWD WV  G+AP RAT EAKLA P
Sbjct: 43  LAEVDRLLALAGTDKTRILSATVWLADMADFAKMNSVWDAWVPQGHAPARATGEAKLATP 102

Query: 62  ELLVEIIIVAA 72
           E LVE+I+ AA
Sbjct: 103 EYLVEVIVTAA 113


>BMEII0278 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Bme Brucella melitensis
          Length = 128

 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/72 (65%), Positives = 54/72 (75%)

Query: 1   VLGHIDRLLAEAGSDKTKILSCQIFLSDVKDFAGMNAVWDEWVAPGNAPPRATVEAKLAR 60
           VL  ++RLL E GSDKTKIL   I+L+D+KDFA MNAVWD WV P + P RAT EAKLA 
Sbjct: 56  VLAEVERLLKEVGSDKTKILQAIIWLADMKDFAEMNAVWDAWVDPAHTPARATGEAKLAT 115

Query: 61  PELLVEIIIVAA 72
           P+  VEIII AA
Sbjct: 116 PDYKVEIIITAA 127


>PA5303 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Pae Pseudomonas aeruginosa
          Length = 117

 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 45/73 (61%), Positives = 55/73 (75%), Gaps = 1/73 (1%)

Query: 1   VLGHIDRLLAEAGSDKTKILSCQIFLSDVK-DFAGMNAVWDEWVAPGNAPPRATVEAKLA 59
            L  I+RLL EAG+DKT+ILS  I+L D+  DF GMN VWD+W+  G AP RATVEAKL 
Sbjct: 43  TLAAIERLLEEAGTDKTRILSVTIYLKDIDADFEGMNRVWDQWLPRGVAPARATVEAKLC 102

Query: 60  RPELLVEIIIVAA 72
            PE+LVE+ +VAA
Sbjct: 103 EPEILVEMSVVAA 115


>XF1711 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Xfa Xylella fastidiosa 9a5c
          Length = 117

 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 44/72 (61%), Positives = 52/72 (72%)

Query: 1   VLGHIDRLLAEAGSDKTKILSCQIFLSDVKDFAGMNAVWDEWVAPGNAPPRATVEAKLAR 60
           VL  IDRLLA A SDK+KIL  +IFL+D+ DF+GMN VWD WV  G  P R TV+AKLA 
Sbjct: 45  VLAEIDRLLALAASDKSKILRAEIFLADINDFSGMNEVWDAWVPQGFTPARMTVQAKLAD 104

Query: 61  PELLVEIIIVAA 72
           P   VEI++ AA
Sbjct: 105 PAWKVEIMVTAA 116