BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0028.0031.p (252 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA0492 [R] COG1540 Uncharacterized proteins, homologs of lactam ... 423 e-118 AGl1871 Non COG 219 6e-57 PAB2445 [R] COG1540 Uncharacterized proteins, homologs of lactam... 213 2e-55 PH0986 [R] COG1540 Uncharacterized proteins, homologs of lactam ... 208 1e-53 Cj1541 [R] COG1540 Uncharacterized proteins, homologs of lactam ... 197 2e-50 >PA0492 [R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B Pae Pseudomonas aeruginosa Length = 252 Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust. Identities = 203/252 (80%), Positives = 223/252 (88%) Query: 1 MKTIDLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDPNTMRRTVEQARQHGV 60 M +DLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDP++MRRTVE A +HGV Sbjct: 1 MTEVDLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDPSSMRRTVEMAAEHGV 60 Query: 61 AIGAHPGFRDLVGFGRRHLNAPAIELVNDMLYQLGALREFARLNGMTLQHIKPHGALYMH 120 AIGAHPGFRDLVGFGRRH+ APAIELVNDMLYQLGALREFARL G++LQH+KPHGALYMH Sbjct: 61 AIGAHPGFRDLVGFGRRHIAAPAIELVNDMLYQLGALREFARLQGLSLQHVKPHGALYMH 120 Query: 121 LARDEEAARVFVQTLRQLDPNLLLFCMHGSAVWRVAQELQQAVVCEFYADRDYDNSGSIV 180 LARDE AAR+FV+TL++L+P LLL+CM GSA WR+ +EL Q +V EFYADRDYD SGSIV Sbjct: 121 LARDEVAARLFVETLQRLEPELLLYCMPGSATWRIGRELGQPLVREFYADRDYDRSGSIV 180 Query: 181 FTRRVGALDPAQVAAKVLRACREGVVRTVEGRDIPIAFDSVCIHSDTPGALALVQATRKS 240 FTRRV ALDP QVA KVLRACREG VRTVEG D+ IAFDSVCIHSDTPGAL LV +TR Sbjct: 181 FTRRVAALDPQQVADKVLRACREGKVRTVEGEDLDIAFDSVCIHSDTPGALELVASTRAR 240 Query: 241 LDAADIAIAAPR 252 L+ A I I APR Sbjct: 241 LEGAGIRIKAPR 252 >AGl1871 Non COG Length = 255 Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 107/250 (42%), Positives = 164/250 (65%), Gaps = 4/250 (1%) Query: 1 MKTIDLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDPNTMRRTVEQARQHGV 60 M IDLNSD+GE +G W +GD D A++ ++SSANIA GFHAGDP + RTV+ A + GV Sbjct: 1 MAAIDLNSDLGESYGAWRMGD--DEAMLAIVSSANIACGFHAGDPAGIYRTVKAAAEKGV 58 Query: 61 AIGAHPGFRDLVGFGRRHLNAPAIELVNDMLYQLGALREFARLNGMTLQHIKPHGALYMH 120 +GAH + D VGFGRR L+A + EL+ D++YQ+GAL+ A G T++++KPHGALY Sbjct: 59 VVGAHVSYPDRVGFGRRDLDATSEELIADVIYQIGALKGVAAAAGTTVRYVKPHGALYNR 118 Query: 121 LARDEEAARVFVQTLRQLDPNLLLFCMHGSAVWRVAQELQQAVVCEFYADRDYDNSGSIV 180 +A D + + + ++ +DP+L+L + + + +A++ AVV E +ADR Y G +V Sbjct: 119 IANDAKQGQAVIDGIKAIDPSLVLMGLANAPILDLARKAGLAVVAEAFADRAYTPEGQLV 178 Query: 181 FTRRVGAL--DPAQVAAKVLRACREGVVRTVEGRDIPIAFDSVCIHSDTPGALALVQATR 238 R GA+ D A++A ++++ REG + ++G I I S+C+H D+PGA+A+ Q R Sbjct: 179 SRREAGAVLHDAAKIAERMVQLAREGTLEAIDGSIIKIEAQSICVHGDSPGAVAIAQEIR 238 Query: 239 KSLDAADIAI 248 + +A IAI Sbjct: 239 RRFEADGIAI 248 >PAB2445 [R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B Pab Pyrococcus abyssi Length = 255 Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 103/247 (41%), Positives = 158/247 (63%), Gaps = 4/247 (1%) Query: 4 IDLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDPNTMRRTVEQARQHGVAIG 63 +DLNSD+GE FG + +G +D +M I+SANIA G+HAGDP MRRTV+ A+++ V +G Sbjct: 3 VDLNSDLGESFGRYKLG--LDEEVMRYITSANIACGWHAGDPIVMRRTVKLAKENNVQVG 60 Query: 64 AHPGFRDLVGFGRRHLNAPAIELVNDMLYQLGALREFARLNGMTLQHIKPHGALYMHLAR 123 AHPG+ DL+GFGRR++ E N +LYQ+GAL FA+ G+ LQH+KPHGALY + + Sbjct: 61 AHPGYPDLMGFGRRYMKLTPEEARNYILYQIGALYAFAKAEGVELQHVKPHGALYNAMVK 120 Query: 124 DEEAARVFVQTLRQLDPNLLLFCMHGSAVWRVAQELQQAVVCEFYADRDYDNSGSIVFTR 183 +EE AR ++ + D NL+L + S V +A+E+ V E +ADR Y+ G++V Sbjct: 121 EEELARAVIEGILDFDKNLILVTLSNSRVAEIAEEMGLKVAHEVFADRAYNPDGTLVPRG 180 Query: 184 RVGAL--DPAQVAAKVLRACREGVVRTVEGRDIPIAFDSVCIHSDTPGALALVQATRKSL 241 + GA+ D ++A +V+ ++G VR + G + + D++C+H D P AL + RK L Sbjct: 181 KPGAVIEDKEEIAERVISMVKDGGVRAINGEWVELRVDTICVHGDNPKALEITSHIRKIL 240 Query: 242 DAADIAI 248 + + + Sbjct: 241 EEEGVKV 247 >PH0986 [R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B Pho Pyrococcus horikoshii Length = 255 Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 99/247 (40%), Positives = 157/247 (63%), Gaps = 4/247 (1%) Query: 4 IDLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDPNTMRRTVEQARQHGVAIG 63 +DLNSD+GE FG + +G +D +M I+SAN+A G+HAGDP MR+TV A+++ V +G Sbjct: 3 VDLNSDLGESFGRYKLG--LDEEVMKYITSANVACGWHAGDPLVMRKTVRLAKENDVQVG 60 Query: 64 AHPGFRDLVGFGRRHLNAPAIELVNDMLYQLGALREFARLNGMTLQHIKPHGALYMHLAR 123 AHPG+ DL+GFGRR++ E N +LYQ+GAL FA+ G+ LQH+KPHGALY + + Sbjct: 61 AHPGYPDLMGFGRRYMKLTPEEARNYILYQVGALYAFAKAEGLELQHVKPHGALYNAMVK 120 Query: 124 DEEAARVFVQTLRQLDPNLLLFCMHGSAVWRVAQELQQAVVCEFYADRDYDNSGSIVFTR 183 +E+ AR ++ + D +L+L + S V +A+E+ V E +ADR Y+ G++V Sbjct: 121 EEDLARAVIEGILDFDKDLILVTLSNSRVADIAEEMGLKVAHEVFADRAYNPDGTLVPRG 180 Query: 184 RVGAL--DPAQVAAKVLRACREGVVRTVEGRDIPIAFDSVCIHSDTPGALALVQATRKSL 241 R GA+ D ++A +V+ ++G +R + G + + D++C+H D P A+ + RK L Sbjct: 181 RPGAVIEDKEEIAERVISMVKDGGIRAINGEWVDLKVDTICVHGDNPKAVEITSYIRKVL 240 Query: 242 DAADIAI 248 + + I Sbjct: 241 EEEGVKI 247 >Cj1541 [R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B Cje Campylobacter jejuni Length = 255 Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 100/252 (39%), Positives = 146/252 (57%), Gaps = 4/252 (1%) Query: 1 MKTIDLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDPNTMRRTVEQARQHGV 60 M +DLNSD+GE FG + +G +D I+ +SS N+A GFHAGDP M T+ A+Q+GV Sbjct: 1 MFKVDLNSDLGESFGAYKMG--MDEEILKFVSSVNVACGFHAGDPCVMDETLNLAKQNGV 58 Query: 61 AIGAHPGFRDLVGFGRRHLNAPAIELVNDMLYQLGALREFARLNGMTLQHIKPHGALYMH 120 IGAHP + DL+GFGRR++ E N LYQLGAL FA+ GM +QH K HGALY Sbjct: 59 CIGAHPSYPDLLGFGRRNMQISFEEAKNYALYQLGALFGFAKAKGMKIQHFKAHGALYNM 118 Query: 121 LARDEEAARVFVQTLRQLDPNLLLFCMHGSAVWRVAQELQQAVVCEFYADRDYDNSGSIV 180 A DE A + + D N++ + SA+ A++ E +ADR Y++ G++V Sbjct: 119 AAIDENLALALCEAVASFDENIIFLGLSNSAMNEAAKKKGLRYANEVFADRAYNDDGTLV 178 Query: 181 FTRRVGAL--DPAQVAAKVLRACREGVVRTVEGRDIPIAFDSVCIHSDTPGALALVQATR 238 + GAL D +V++ +E V ++ G++I + DS+C+H D AL V+ + Sbjct: 179 SRKLEGALIHDENLAIKRVIKMIKESKVTSINGKEIDLKADSICVHGDNAKALEFVKKIK 238 Query: 239 KSLDAADIAIAA 250 ++L I I A Sbjct: 239 ENLKKEQIQICA 250